Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0682200 |
| Transcript ID | LotjaGi1g1v0682200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pentatricopeptide repeat-containing protein family; TAIR: AT5G03800.1 Pentatricopeptide repeat (PPR) superfamily protein; Swiss-Prot: sp|Q9FFN1|PP363_ARATH Pentatricopeptide repeat-containing protein At5g03800; TrEMBL-Plants: tr|A0A072U306|A0A072U306_MEDTR PPR containing plant-like protein; Found in the gene: LotjaGi1g1v0682200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:124956555..124967233) extracted from Lotus japonicus Gifu genome v1.2.
AGTTGGTCTTCCATGAAAAAGGAAAAAAAGGATAAGGTAGTAGTAGTAGCGCGCTCACTTGACACACTCAAAAAATAATC TCAGTTTGAACCGAGCACAGAATAGATATATGGAACGATGGAGTCACTTCTCCTTCTCCATCCCAAACCTTTCTTCCTCT CCAACTCCAACTCACCTCCAATCTCCTCTTTCCTCCACAAAAACTCCAGAATCCACCATGCCCTCAACTCTCTTCCACTC CCACTCCCACCGCATTCCGCCGAACCCTCCCACCTCCTCCGCCTCTCCACTCGCCTCCGCCGCCCCGACCTCACCAAAGC CATCCACGCCACACTCCTCAAACTCCCCCATCAACAACACCAACACCTCCTCTTCTCCACCTACCTCAACCTCGGCCTCT TATCCTACGCCCACCGCATCTTCCTCTCCCTCTCTTCCCCCACTGTCATCTCCTACTCCGCCCTCATCTCCGCCTTCTCC AAGTCCCACCGAGAACACCAAGCCTTCCACCTCTTCCTCCACATGCTCACCTCCTCCACTGTCCTCCCCAATGGCTACAC CTACGTCGCCGTTTTAACCGCCTGCATTCAAACCCTCCACCTCCAGTTCGGCCTCCAGCTCCACGCCGCCGTCATCAAGA CCGCTTATATCGATTCTGTCTTCGTCGCCAATGCGCTCATGTGTTTATACTCAAAATGCGGCTCTCATGATGACATGCTC AAGCTGTTTGATGAAATGCCCAGCAGGGATATCGCGTCGTGGAACACTGTTTTGTCCGGTGCGGTGCAGGAGCTCATGTA CGGGACCGCGTTTGAGTTGTTCCGTGATATGCAGGCGACGGACGCGTTGAGTTTGGATGATTTCACGTTGTCGACGCTTC TTACCGCGTGTTCTGGTTCTGCTTCGGTGATGGAAGGCCTGCAGGTGCACGCGCATGCCGTGAAGGTTGGGCTGGAGACA GAGCTGAGTGTTGGAAATTCCCTTATTGGGTTCTACACGAACTGTGGAAGTCTTGACAATGTGGTGAGGTTGTTTGAGGA GATGAGTGTGAGGGATGTTATAACGTGGACAGAGATGATCACCGCGTACATGGAGTTTGGGTTGGTGAATTTGGCTTTGA AGATATTTGATGAGATGCCGGAAAAGAATTCGGTGTCTTATAATGCTCTTCTGGCCGGGTTTTGCCAAAATGGTGAGGGT TTAAAGGCTCTAGATTTGTTCATCAGAATGGTGGATGAGGGCTTGGAGTTGACGGATTTCTCATTGACTAGCGCGATTAA TGCCTGCAGTTTGCTTGCTGATTACAAGGTCAGCAAGCAGATTCATGGGTTTGCTACCAAGTTTGGTTTTGGATCAAATG CTTGTGTTGAAGCTGCGTTGCTTGACATGTACACGAGGTGTGGGAGGATGGTAGATGCCAAGAAGATGTTCTGTAGATGG GAGTTAGAGGAATTTAGCTCTATCGTTTGGACATCCATGGTGTGTGGCTATGCTCGAAACGGGCAACCGGACGAGGCAAT CTCTCTTTTCAAACATGGCCAATCAGAAGGGGAAATGATTGATGAAGTTGCATCGACTTCAATGCTTGGTCTTTGTGGAA CTGTCGGGTATCATGATATGGGTAAGCAAATCCACTGCCAAGTTCTTAAGTTTGGCTTTCAATCTAATGTGGGGGTCGGA AATGCAGTTGTTAGCATGTACTTTAAGTGTGGGAATGTGGATGATGCAATTAAGATGTTTAATAGTATGCCCTCTGCTGA TATAGTTTCATGGAATACTTTGATTTCTGGCTATCTCATGCATAGACAGGGTGATAGAGCATTGAAAATATGGTCGAAAA TGCAGGAGGTGGGCATAAAACCTGATAAGATTACATTTGTTTTGATAATTCCAGCTTACAGGCAAACTAAATTGAATTTG GTTGATGATTGCCGTAGTTTGTTTAATTCAATGAGAACTATTTATCACATTGAGCCCACAACCGAGCATTATTCTTCTTT CATCAGTGTTTTGGGTCACTGGGGTCTCTTGGAAGAAGCATTGGAAACTATCAATAAGATGCCTTTTGAGCCTACTGCTT CTGTTTGGCGTGCTTTGCTTGTTAGTTGTAGACTACATAAGAATACAATGATTGGGAAATGGGCTGCTAAAAATATTCTT GCCCTGGAACCTGAAGATCCATCTACCTATATTCTTGTTTCAAATTTGTATTCTGCTTCTGGGAGATGGGATTTCTCTGA AACTGTCAGGTGGAATATGAGAGAAAAGGGATTTCGCAAACACCCAGCTCAAAGTTGGATCATTTGTCAGAAGAAAATAC ATTCATTCTATGCAAGAGATAGATCACATTCACAAGAGAAAGACATATATAGTGGATTGGAGATTCTAATCTTGGAGTGC CTAAAAGCAGGATATGAACCTGACACGAGTTTTGTTCTCCATGAAGTAGAGGAGCATCAAAAGAAAAATTTCCTATTCTA TCACAGTTCAAAACTGGCAGCAACTTATGGAATACTGATGACGAAGCCCGGAAAACCCATTCAAATTGTAAAGAACATCC TGCTCTGTGGGGACTGTCATACATTCTTAAAATATGCATCTATTGTCACTAAGAGGGATATTTTTCTAAGAGACTCTTCT GGATTTCATTGTTTCTCTAATGGCCAGTGCTCGTGTAATGACTACTGGTGACACACTGGTAAGCTGGTTGATCTAACTGT TCATCCTCATCCATATCAGTGATGTATGATGAAAAAATCAGAGTTATAGGATAGGCATGTATAAAATAGAAATGTTATTT AGTATGAAATTCTTTTCACCGTTGTTACTATCAATTTTGTGGCACCATTCAGTAAAGGGAAAAATGTAAAACAGAGAGGT AGTGTAGAAAAAAGCTTCTTAAAAATGTTTTCTGAATAAAAAAGGTATTGCTTTTTTGTCAACATTTTGCTGCATTAAAA TATAGCTTTGAGGTTAGTTGCTGCGATGCAATTGTAGTAAATTTTGTTTCCATGGCTTCTATGAAAGGAATTCTTCGACT AGTAAACTGACGATCTTTGCCTCAATGATTTTGTCCCAAGTCATTGTTACTTTTTTTAAACGGTGGTTTTATATATTGGT GTCATTGCTAGTATAAGAGAAAAAGTATAGAGCCCTCTTATTCCACTGCTTAGTCCAGATAAGTTGTCTTCAACTTTGAA GAGTTAACTGTGAAGATGCTGGAGACTAGAGAGAGTAAGGGCATAGGGGAGAAAGATAAGACCTGGTCACCGCATGAGAG GAACAAGGGTTGCCGATGTTGGTGCTGGAAGTACTGTATGCAATTGGAAACAAAGAAATTGGAAGGGTGTTGTCGTTGCC AAAAACATGACTTATACATGTCTTCTATGGTCTTTTTCCATATGGATAATCCGTCTTGAAGTTTTAACTTTTAACTTCAT TTTCTGAACTGTTTGATGTGGTGCGAAAAAAGAGAGCTGCACGGCCTCATTAGAACAAAGATATATTTTCAGTTAATTGG AAATCTTCACAATGTATGACTTCTTCAGGTTTCGAGTCTTGATCAATTTTGCTCCATGATAGAGACCTGAATGCTAATTT GGGCTTGGGAAAGCCCAAAGTGTGGAAGGTCTATGTGAGGAAAAAGGGGAGAAAGGAGTGAGCTGGCAAAGTTAGTTTGT ATAAGAGAATAACCGAGTGAGGGTGAGACTCATTCATGATTAGCTTTTCTGTTAGAGGAGAGAGAGTGATCTTTCTTGTT GAGGGGAAGCCATTAGTGCTTCTTGGGTTGTTAGCCAGCTCTAACAATACTTTTCTTTTCATTCTCTGTAATTGCTCTTT CGATATATACTATTCCAGTCATATTTCTTCTGATATTCCTGTTATACCATACTTGCTCTCTAAAATCCCTATCAATTGGT CCGACCTGCCGGATCATCTGCACTCGTTTCACTGAGAAGCTGGTAGATGCCACCAAAAATGACTGATCGCATGGAAGCTC TTGAGACTCAATTGGGAACCGTTACTGCTACGCTGCAGGAACTTGCTCTCCAGATGCAACAACAGAGCTTGGTTCTCACT GAACTAAGCAAACAGGTGGGCTCGAAAGGAGTGGTTCCGGAGGGGGAAACCTCGACCGGAGATTCTAACATGGGCGAATC GCGTCTAGCAGGGAAGAAGGTGAAATTGCCGGTGTTCGAGGGAGAAGACCCCGTGGCTTGGATTACGCGAGCTGAGATTT ACTTTGATGTGCAAAACACCCCGGATGAGCTGCGAGTGAAGCTATCCAGGTTGAGCATGGAGGGATCCACCATCCATTGG TTCAATCTGCTCATGGAGACAGAGGATGAACTCTCCTGGGAGAAACTCAAGCGAGCCTTAATCGCGCGCTATGGAGGACG AAGGCTGGAGAACCCATTCGAGGAGCTATCCACGTTGCGACAACGAGGTAGTGTGGAGGAATTTGTGGAGGCGTTTGAGC TGTTATCATCGCAGGTGGGACGGTTGCCTGAGGACCAGTACCTGGGCTACTTCATGAGTGGGCTGAAGCCACTGATTCGT CGGCGAGTCCGCACTCTGAACCCCACCACTCGTATGGAAATGATGAGGATCGCGAAGGATATAGAAGATGAGCTCAAGGA AGAAGACGACGAAGAGGGTAAACGGGTAATTAGGAAACCCGGGTATGAACGAGCGGGTCAAGGAGATTGGGCCGGGTCTT CTGCTGCTAGAAGTGGGCCTTACGTTACTGCTAGAAGTGGGCCTTACGCTACTAAGGACCCAAACCAGTTTTCTAAGTCA AGTGGGTCAATTCCGACCCGGTCGCTGAGTCTGACGGGAACGAATTCCACCACATCGTCAATGGGCTCGACGGCGAGGAA CACCGGTGGCGACTACCGTCCCGGATCATCTGAGCGGTGGAAGGGGGTTCGCCGGTTTCCGGTGGATGAAATCGCCGAGA GAAGAGCAAAGGGGCTCTGTTTCAAATGTGGGGGAAAATATCACCCAACTCTGCACAAATGCCCTGAAAGATCGTTGCGG GTCTTGATCTTAGGAGAGGGAGAAACGATTGATGACGAGGGTGAGATTGTGATGCTCGAAGGGGACCAACCAGAGGACGA GGAAGAGGAGGAACCAGCTGCGCTTAAGCTTATGGGAGTTCTGGGCTGTATGGCGGAGACCCAGACGATGAAGCTCTCGG GTCAGGTGGGACATGTGGAATTGTTAGTCTTGATTGACAGCGGGGCAAGTCATAATTTCATTTCTCCTACGATTACATCG GCTTTGGGCTTGACGATTACAACTACCCATCCTAGGAGCATCAAGCTTGGCGATGGCCACAAGGTGGTTACCAAGGGAAT TTGCAAAGGAATTAAAGCCAAGCTGGGGAGCATAGAGATCACCATTGATGCCCTGGTGTTGGAACTGGGTGAGCTAGACT TGGTGATGGGAGTGTCTTGGCTGCGCACTCTAGGTAAGGTACTCATGGACTGGAAAATGATGACTATGCAGTTCATACAT GGGGGCCAGGTAGTGAAACTACAGGGGTTGGGGAACAAGGACAGCCAGCAGAGCAACCTGCATTCCTTCCTCAACGACAC TCAGGGAAGAGAGAAGATGGAGTGGTGGTGGCCGCAACTCAATCTTACTGAGGTGACCAGAGCAGTGGAGGAAAGCCCAC ATCAACTTCAAGCTCTTTTGAAAGAATTCCAGGCAGTCTTCACCACCAAGATTCAATTACCACCTGAGAGGTCCAAGGTC CACCAGATAAACCTTTTTCCAGACCAGGGACCCATCAATGTAAGGCCCTACAGGTATCCCCATCACCAGAAAGAAGAAAT TGAGAAGCAAGTGTCGGAGCTGATGGAAGCAGGAATTATTCGACCAAGCATGAGTTCTTATTCTAGTCCTGTGATCCTAG TGAAGAAAAAGGATAAGAGTTGGCGGATGTGTGTAGACTATAGGGCATTGAACAAAGCAACTATCCCAGATAAGTACCCT ATTCCTATTGTGGATGAATTGCTAGATGAGTTAAATGGGGCAACAATGTTTTCTAAAATAGACCTTAAGTCTGGATATCA TCAAATCAGGGTACATGAAAATGATGTCCCCAAAACTACTTTTAGGACTCATAATGGCCACTATGAATACTTAGTCATGC CATTTGGGCTGATGAATGCCCCTGCCACCTTCCAAGCCATAATGAATGACATATTCAGGCCTTACCTAAGGAAATTTGTC TTGGTTTTTTTTGATGATATTCTCATATATAGTAAGGATCTAAATGAGCACATCGGTCACTTGGAATTGGTCTTATCTGT GTTACTGAGCAACTGTTTTGTGGCTAATCAGTCCAAGTGCAGGTTTGGTTGTCGCCAGGTTGATTATCTGGGCCATCTAA TCTCCGGGGATGGTGTAGCAGTAGACCCTGACAAGGTGCAATGCATTGAAGCTTGGCCTGAACCAAAAAATGTCAAGGGG GTGAGGGGTTTCCTTGGATTGACTGGCTATTACAGGGAATTCATTAAGGACTATGGAAAGGTAGCTAAACCACTCACAGA ACTGACCAAGAAAGACAACTTCTGGTGGGGGCCTGAAGCACAACAAGCTTTTACCCTTCTCAAATCTGTCATGACTACTT CTCCAGTCTTAGCCCTTCCTGATTTTAACCTCCCTTTTGAGGTTGAGTGTGATGCTGCAGGGCGGGGTATTGGGGCAGTC TTGATGCAACAAAGGAGACCCATAGCCTATTTCAGTAAAGCCTTGTCTGCTGGAAACCTGGCCAAGTCAGTCTATGAGAA AGAACTGATGGCTTTGGTATTGTGTATTCAACATTGGAGGCATTATTTGTTAGGGAGGGTTTTTATTGTTTATACAGATC ACAAGAGTTTGAAGCACTTCCTACAACAAAGGGTTTCATCTCCTGACCAACAGTGTTGGTTAGCCAAGTTGTTAGGTTAT CAATTTGAGGTTAAGTACAAATCAGGGTTGGAAAACAAAGCAGCCGATGCCTTGTCCAGATGTTTTGATGATGTGGAGTT GCACTCTTTGATCTCTTTTCCTCTGTGGCAAGATAGGAAAAAGCTACTGGATGAGTTAGCTCATGACTCCTACATCCAGA ACTTGACAGTAGAGGTCCAAAAAGACCCTCACTCTAAACCAGGGTTTGTGCTCCAGCAAGGGGTCTTGTTGTATCAAGGA AGGCTGGTGCTATCACCTCAATCACCATCTATTCCTTGGCTATTAGCAGAATTTCATGGTTCCCCAACTGGTGGCCATTC TGGTTTTTACAGGACTTACAGAAGGCTGGCTGAATCCCTTTATTGGGTGGGAATGCAAAAGAGGGTCAGGGATTTTGTGC GCGAATGTGATGTTTGCCAAAGACAGAAGTACAGTGCTACTACCCCCGGGGGCCTGCTCCGACCTCTCCCAATTCCTAAT GCAGTATGGGAAGACATTTCTCTTGACTTCATAACTGGGCTACCTAAGTCTAAAGGCTATGAGGCTATTCTAGTAGTGGT GGACAGACTCTCTAAATATAGCCACTTCATCCTTTTGAAGCATCCTTACACTGCTAAATCTATTGCAGAAATCTTTGCCA AAGAGATAGTGAGGCTTCATGGTATTCCTAGTTCTGTGGTCAGCGATAGGGATCCCATCTTTGTGAGCCATTTTTGGTCA GAACTGTTCAAGCTTCAAGGTACAACACTAAAAATGAGTTCTGCCTATCACCCTGAGACAGATGGGCAAACAGAGGTTAC CAACAGGTGTTTGGAGAGCTATTTACGGTGCTTTGCCTCTGATCATCCTAAGACTTGGTCTTATTGGGTACCCTGGGCTG AATTTTGGTACAATTCTACCTTCCATACCTCTATTGGCCAAACCCCTTTTGAAGTGGTATATGGGAGGAAAGCTCCTCCT TTGGTGCGATTCCTTTCAAATGAAACTAAAGTAGCTGCTGTGGCCCTGGATCTTAGTGAAAGGGATGAAGCTATTAAACA ACTCAGGGAGCATCTCAAGAAAGCACAGGAACAAATGGCCAGTTATGCAAACAAGAAAAGGAGAGACCTGAATTTTGAAG TGGGAGAGTGGGTTTTCTTGAAGCTTAGGCCACATAGACAACATTCAGTGGTCAAGAGGATCAATCAGAAGTTAGCTGCC AGGTTTTATGGGCCCTTTCAGATAGAGACTAAGATTGGTGCAGTTGCATACAAGTTGAAGCTCCCTGATGACTCTAAAAT TCATCCTGTTTTCCATGTGTCCCTACTGAAGAAAGCCATTGGTAGCTCTCAGGTTCAAGGCCAGTTGCCTAGGGACTTGG AGATTGAAGAGATGACTGACATCTACCCTGAATCAATCATAGGAACCAGGACAATTCGCCAGGGAGACGGTGAGGTGCAC CAGAGTTTGATAAAATGGAATCACAAGTCCTTGGATGATGTTACTTGGGAAGACAATGCTGTATTGGCTGGTCAATTTCC TGATTTCTGCCTTGAGGACAAGGCTGTTTCTGAGGGGGAGGGAATTGATAGAGACCTGAATGCTAATTTGGGCTTGGGAA AGCCCAAAGTGTGGAAGGTCTATGTGAGGAAAAAGGGGAGAAAGGAGTGAGCTGGCAAAGTTAGTTAGTATAAGAGAATA ACCGAGTGAGGGTGAGACTCATTCATGATTAGCTTTTCTGTTAGAGGAGAGAGAGTGATCTTTCTTGTTGAGGGGAAGCC ATTAGTGCTTCTTGGGTTGTTAGCCAGCTCTAACAATACTTTTCTTTTCATTCTCTGTAATTGCTCTTTCGATATATACT ATTCCAGTCATATTTCTTCTGATATTCCTGTTATACCATACTTGCTCTTTAAAATCCCTATCACTCCAGGTACATGATTT TCTTAATGTTCATTGCACTAATTGAACTTGAGTCTTTTTATTCATTACATTGAAGTTGTTTGTTGTTTCTTCCAATATGA GCAGTAATATACACTCAACTGAACTTTCTTAATTTGTTCTTGCATTACAGTCAGCCAACCAGTAAAGAGCATTGGCTTAT CTAAGTTAGAGTGGGGACACATTGATCCTTCATCATCGTGTTCGCTACCGATCTATTATCTCTCCTTCTTCAAGGCTTCA AAAGGTAGTACAATCTCTCTTCTTGAATCCCTTTTTAAAAAAATTCTTTGGGAGCAGGGAGAGAATTGCAAAAAAAATCA TCTTGGTTTCACAGGAGAATGTTTAGGGACAAAAGAGAGGGAAGATTAGGATTAAAATTTTGTATGCTTCTAATTTGGCT TTGTTGGGAAAATGGATATGAAGAGTGAGGGGTTGAAAATATATGCTGTGGAATAAGGTTTTAGTTTCTAAATATGGTGA GATGATAGTGGATAGATGGGAAGTTGGTAGGATGTGATCAAAGTGGTGGATGGAAATACAAAAATTAGAGTTAAGGGGTG ATTTTCAATTGAGCTGATTGAAAGAAAACTTGATAAAAGGTGGGAGATAGCAAATACCTCTTTTTGGCATGACGCGTGGA TAGGAGAGAGAATGGTAGATTGCAATGGAGATGGGGGTGGAAAAGTATTTTTTTATTTTACTGGGAAAATAATTTGCTTA ATTCTTTCCTCAAAGCACTGCAATCAGCAGAACTGCAGTGACAAATGGAGTGGGCTAGCAGAACCTGCAGGCATCTATTT AATGAGGTCAGTTTACGGAATAACTATCCATTGCAATTTAGGGTTGAGCCTTTCTTCCATACTATTTGGAATAGGATGGT CCCTCTGAAGGTCAATGTTTTCTCATGGAGGGTCATCCTAGATAGAATACCATCTAAAGTCAACTTGGTAAGAAGAGTTA TGTTTGTGGAAGATTTAGTTTGTACAGCAAGTAAACAAGATGAGAAGAGTACAAATCGTATTTTCCTTGAATGCAGTTAC TAAAAAGTAAAAAACATGGTCAATGTTCAGCAAGTAAACAAGATGAGAAGTGTACACATAGCATTTTCCTTGAATGCAGT TACTAAAAAATATGGTCAATGTTCTTAAGTGGTTGGCATATTCAACTGTGATCCAGAACTGCAGTAAAGAACATTTTATT CAGTTTTCAGGTTTGCCTTTTTGCAATGCAGAAAGGAGAAAGTGGCAGATAATTTGGCACTATATTGTTTGTTCACTATG GATGACAAGAAACTGTTCTGTTTATTACTCAAAGACGCTGGATGTGCAGGACATTTCTGATTGAGTGAAGAATCTGAAGA CAAGATCTTGGTTGTGGTTAAAAGCTAAAAAGCAAGCTGGTTTTTGAATCCTGCTACTGCCTGCTTGAATTTATAATAAT TCTGGTGTGCCTTGCATAATCATTTCAATACTCAAAACATTTCTCCACTTTCTTCACCATATCTAGAAACTAAGTAAATA GAGTGGTTAATGGAAGGAGCTTGGTGTGCTTAGCAGAGAGTTGAGCTACAAGGGGTAGAGAGCAGTGCTAGCACCAGAGT TGGGTACCAAAGCATGAGTGAGGCATATCAGAGAGTGCTTTGAGTGTGGGTGAGGCCAGATAGAGAATCCAATTGACGTG TAACTGATTAAAGTCCCTTGTAATCCAATTAACTTCAATTGACTTTTAACATTTATCCAAACACATCCAAGGATATTAAA ATATTCCAGAACAATAGAAATTACTCACAATAAGCAAAG
CDS sequence (LotjaGi1g1v0682200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTCACTTCTCCTTCTCCATCCCAAACCTTTCTTCCTCTCCAACTCCAACTCACCTCCAATCTCCTCTTTCCTCCA CAAAAACTCCAGAATCCACCATGCCCTCAACTCTCTTCCACTCCCACTCCCACCGCATTCCGCCGAACCCTCCCACCTCC TCCGCCTCTCCACTCGCCTCCGCCGCCCCGACCTCACCAAAGCCATCCACGCCACACTCCTCAAACTCCCCCATCAACAA CACCAACACCTCCTCTTCTCCACCTACCTCAACCTCGGCCTCTTATCCTACGCCCACCGCATCTTCCTCTCCCTCTCTTC CCCCACTGTCATCTCCTACTCCGCCCTCATCTCCGCCTTCTCCAAGTCCCACCGAGAACACCAAGCCTTCCACCTCTTCC TCCACATGCTCACCTCCTCCACTGTCCTCCCCAATGGCTACACCTACGTCGCCGTTTTAACCGCCTGCATTCAAACCCTC CACCTCCAGTTCGGCCTCCAGCTCCACGCCGCCGTCATCAAGACCGCTTATATCGATTCTGTCTTCGTCGCCAATGCGCT CATGTGTTTATACTCAAAATGCGGCTCTCATGATGACATGCTCAAGCTGTTTGATGAAATGCCCAGCAGGGATATCGCGT CGTGGAACACTGTTTTGTCCGGTGCGGTGCAGGAGCTCATGTACGGGACCGCGTTTGAGTTGTTCCGTGATATGCAGGCG ACGGACGCGTTGAGTTTGGATGATTTCACGTTGTCGACGCTTCTTACCGCGTGTTCTGGTTCTGCTTCGGTGATGGAAGG CCTGCAGGTGCACGCGCATGCCGTGAAGGTTGGGCTGGAGACAGAGCTGAGTGTTGGAAATTCCCTTATTGGGTTCTACA CGAACTGTGGAAGTCTTGACAATGTGGTGAGGTTGTTTGAGGAGATGAGTGTGAGGGATGTTATAACGTGGACAGAGATG ATCACCGCGTACATGGAGTTTGGGTTGGTGAATTTGGCTTTGAAGATATTTGATGAGATGCCGGAAAAGAATTCGGTGTC TTATAATGCTCTTCTGGCCGGGTTTTGCCAAAATGGTGAGGGTTTAAAGGCTCTAGATTTGTTCATCAGAATGGTGGATG AGGGCTTGGAGTTGACGGATTTCTCATTGACTAGCGCGATTAATGCCTGCAGTTTGCTTGCTGATTACAAGGTCAGCAAG CAGATTCATGGGTTTGCTACCAAGTTTGGTTTTGGATCAAATGCTTGTGTTGAAGCTGCGTTGCTTGACATGTACACGAG GTGTGGGAGGATGGTAGATGCCAAGAAGATGTTCTGTAGATGGGAGTTAGAGGAATTTAGCTCTATCGTTTGGACATCCA TGGTGTGTGGCTATGCTCGAAACGGGCAACCGGACGAGGCAATCTCTCTTTTCAAACATGGCCAATCAGAAGGGGAAATG ATTGATGAAGTTGCATCGACTTCAATGCTTGGTCTTTGTGGAACTGTCGGGTATCATGATATGGGTAAGCAAATCCACTG CCAAGTTCTTAAGTTTGGCTTTCAATCTAATGTGGGGGTCGGAAATGCAGTTGTTAGCATGTACTTTAAGTGTGGGAATG TGGATGATGCAATTAAGATGTTTAATAGTATGCCCTCTGCTGATATAGTTTCATGGAATACTTTGATTTCTGGCTATCTC ATGCATAGACAGGGTGATAGAGCATTGAAAATATGGTCGAAAATGCAGGAGGTGGGCATAAAACCTGATAAGATTACATT TGTTTTGATAATTCCAGCTTACAGGCAAACTAAATTGAATTTGGTTGATGATTGCCGTAGTTTGTTTAATTCAATGAGAA CTATTTATCACATTGAGCCCACAACCGAGCATTATTCTTCTTTCATCAGTGTTTTGGGTCACTGGGGTCTCTTGGAAGAA GCATTGGAAACTATCAATAAGATGCCTTTTGAGCCTACTGCTTCTGTTTGGCGTGCTTTGCTTGTTAGTTGTAGACTACA TAAGAATACAATGATTGGGAAATGGGCTGCTAAAAATATTCTTGCCCTGGAACCTGAAGATCCATCTACCTATATTCTTG TTTCAAATTTGTATTCTGCTTCTGGGAGATGGGATTTCTCTGAAACTGTCAGGTGGAATATGAGAGAAAAGGGATTTCGC AAACACCCAGCTCAAAGTTGGATCATTTGTCAGAAGAAAATACATTCATTCTATGCAAGAGATAGATCACATTCACAAGA GAAAGACATATATAGTGGATTGGAGATTCTAATCTTGGAGTGCCTAAAAGCAGGATATGAACCTGACACGAGTTTTGTTC TCCATGAAGTAGAGGAGCATCAAAAGAAAAATTTCCTATTCTATCACAGTTCAAAACTGGCAGCAACTTATGGAATACTG ATGACGAAGCCCGGAAAACCCATTCAAATTGTAAAGAACATCCTGCTCTGTGGGGACTGTCATACATTCTTAAAATATGC ATCTATTGTCACTAAGAGGGATATTTTTCTAAGAGACTCTTCTGGATTTCATTGTTTCTCTAATGGCCAGTGCTCGTGTA ATGACTACTGGTGA
Protein sequence (LotjaGi1g1v0682200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESLLLLHPKPFFLSNSNSPPISSFLHKNSRIHHALNSLPLPLPPHSAEPSHLLRLSTRLRRPDLTKAIHATLLKLPHQQ HQHLLFSTYLNLGLLSYAHRIFLSLSSPTVISYSALISAFSKSHREHQAFHLFLHMLTSSTVLPNGYTYVAVLTACIQTL HLQFGLQLHAAVIKTAYIDSVFVANALMCLYSKCGSHDDMLKLFDEMPSRDIASWNTVLSGAVQELMYGTAFELFRDMQA TDALSLDDFTLSTLLTACSGSASVMEGLQVHAHAVKVGLETELSVGNSLIGFYTNCGSLDNVVRLFEEMSVRDVITWTEM ITAYMEFGLVNLALKIFDEMPEKNSVSYNALLAGFCQNGEGLKALDLFIRMVDEGLELTDFSLTSAINACSLLADYKVSK QIHGFATKFGFGSNACVEAALLDMYTRCGRMVDAKKMFCRWELEEFSSIVWTSMVCGYARNGQPDEAISLFKHGQSEGEM IDEVASTSMLGLCGTVGYHDMGKQIHCQVLKFGFQSNVGVGNAVVSMYFKCGNVDDAIKMFNSMPSADIVSWNTLISGYL MHRQGDRALKIWSKMQEVGIKPDKITFVLIIPAYRQTKLNLVDDCRSLFNSMRTIYHIEPTTEHYSSFISVLGHWGLLEE ALETINKMPFEPTASVWRALLVSCRLHKNTMIGKWAAKNILALEPEDPSTYILVSNLYSASGRWDFSETVRWNMREKGFR KHPAQSWIICQKKIHSFYARDRSHSQEKDIYSGLEILILECLKAGYEPDTSFVLHEVEEHQKKNFLFYHSSKLAATYGIL MTKPGKPIQIVKNILLCGDCHTFLKYASIVTKRDIFLRDSSGFHCFSNGQCSCNDYW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 67 | 166 | 100 | 1.0E-110 | – | |
| ProSiteProfiles | 109 | 143 | 35 | 8.342 | ||
| Pfam | 111 | 138 | 28 | 0.079 | ||
| Gene3D | 138 | 272 | 135 | 7.5E-21 | ||
| PANTHER | 164 | 272 | 109 | 1.0E-110 | – | |
| ProSiteProfiles | 180 | 214 | 35 | 9.558 | ||
| TIGRFAM | 185 | 212 | 28 | 4.5E-5 | ||
| Pfam | 211 | 258 | 48 | 1.1E-7 | ||
| ProSiteProfiles | 247 | 281 | 35 | 6.73 | ||
| PANTHER | 268 | 357 | 90 | 1.0E-110 | – | |
| Gene3D | 274 | 406 | 133 | 4.5E-26 | ||
| ProSiteProfiles | 282 | 312 | 31 | 6.785 | ||
| Pfam | 287 | 312 | 26 | 0.1 | ||
| ProSiteProfiles | 313 | 343 | 31 | 9.635 | ||
| TIGRFAM | 315 | 344 | 30 | 0.0028 | ||
| Pfam | 343 | 390 | 48 | 3.2E-10 | ||
| ProSiteProfiles | 344 | 378 | 35 | 11.608 | ||
| TIGRFAM | 346 | 379 | 34 | 9.4E-7 | ||
| PANTHER | 364 | 505 | 142 | 1.0E-110 | – | |
| Gene3D | 407 | 498 | 92 | 8.2E-12 | ||
| ProSiteProfiles | 414 | 444 | 31 | 5.656 | ||
| Pfam | 420 | 441 | 22 | 0.9 | ||
| ProSiteProfiles | 447 | 481 | 35 | 9.679 | ||
| TIGRFAM | 449 | 472 | 24 | 4.9E-5 | ||
| Pfam | 450 | 476 | 27 | 2.6E-6 | ||
| ProSiteProfiles | 482 | 516 | 35 | 6.632 | ||
| PANTHER | 488 | 714 | 227 | 1.0E-110 | – | |
| Gene3D | 502 | 598 | 97 | 1.0E-21 | ||
| ProSiteProfiles | 517 | 547 | 31 | 8.068 | ||
| TIGRFAM | 522 | 550 | 29 | 6.8E-5 | ||
| Pfam | 522 | 547 | 26 | 0.001 | ||
| Pfam | 548 | 593 | 46 | 1.9E-11 | ||
| ProSiteProfiles | 548 | 582 | 35 | 12.299 | ||
| TIGRFAM | 550 | 583 | 34 | 3.1E-8 | ||
| ProSiteProfiles | 583 | 615 | 33 | 5.393 | ||
| Gene3D | 599 | 748 | 150 | 1.2E-12 | ||
| ProSiteProfiles | 621 | 651 | 31 | 6.588 | ||
| Pfam | 624 | 648 | 25 | 0.011 | ||
| ProSiteProfiles | 687 | 721 | 35 | 8.331 | ||
| Pfam | 725 | 846 | 122 | 1.3E-32 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of LotjaGi1g1v0682200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…