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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0686300 |
| Transcript ID | LotjaGi1g1v0686300.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT3G09880.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|O04376|2A5B_ARATH Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform; TrEMBL-Plants: tr|A0A0S3RYS9|A0A0S3RYS9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0686300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:125347557..125352355) extracted from Lotus japonicus Gifu genome v1.2.
ATCTCCGGCGGCCGCAGCTCCGGCCACCGCACCCATCATCCACCACTCTGATCCAAAACCCGCCGCAGGCCAAGCATTCA TGGACTAGCAAGAAGATCTTGCCACCACCTTGCTGCTGCTGCTGCTTCAATCTTCCACAACCCACTTCCCAATTCATCAC CTTAGGGTTAGGGTTCGCAGAAAATGTTCAAGAGAATAATGAAAGGAGGAGGAGGGCAGAAGAAGCCCTCAAAATCCGAC CCCACCGATCAATCCGCCTACGGGTACGGTCCCCCGGCGGCGGTGGAGGTTCCACCGCCGTCGGGAACCATCGAGCCGCT CCCCCTCTTCCGCGACGTTCCGGTTTCCGAGAGGCAGAACCTCTTCCTGCGGAAACTGCAAGTCTGCTGCCACCTGCTGG ACTTCTCCGACACGCTGAAATCGGTCCGGGAGAAGGAAATCAAACGGCAGTCGCTGATGGAGTTGGTGGATTTCATCCAG TCCGGTTCCGGCAAGATAACGGAGACTTGCCAGGAAGAGATGATCAGAATGGTGTCAGTCAACATTTTCCGGTGCTTGCC GCCGGCGTCTCATGAGAATACAGGGCAGGAAGCCGGTGACCCTGATGAGGATGAGCCGTGTTTGGACCCGGCGTGGCCGC ACTTGCAGCTAGTCTATGAGCTTCTTCTCAGATATGTGGTTTCATCTGATACTGATACAAAGGTAGCTAAACGGTACATT GATCATTCTTTTGTGCTTAAGTTGCTTGATTTGTTTGATTCTGAGGATCCGCGCGAGCGCGAGTATTTGAAGAACATTTT GCATCGTGTGTATGGGAAATTCATGGTTCATAGACCGTTTATTAGGAAGGCGATTAACAACATTTTTTACCGGTTTATAT ACGAGACCGAAAGGCATAGTGGGATTGGGGAGCTTTTGGAGATTCTAGGGAGTATCATTAATGGTTTTGCATTGCCCATG AAGGAGGAGCACAAGTTGTTCCTTGTGAGGGCTCTTCTGCCTCTGCATAAGCCTAAGCCTGTAGCTTTGTACCATCAGCA GTTGTCCTACTGCATATCTCAGTTTGTGGAGAAGGATCACAAGCTCGCGGATACTGTTATTAGGGGCTTGTTGAAGTACT GGCCTGTCACCAATTGCCAGAAGCAAGTTCTCTTTCTTGGAGAGCTGGAGGAGGTGCTGGAGGCCACACAGGCTGCAGAG TTCCAGCGCTGCATGGTTCTTCTTTTTAGACAGATTGCACGCTGCCTCAATAGTTCTCATTTTCAGGTTCGTCAAAATTT TGTTTTTCTATTTGTTGATTATGATTAATACAAGCTTTGATAATTGGATTCCAAATATCCTGTTAACTATTTCTTTGTTT ATGAAGATGCATAAACTAGGCCCATATAATTAGCTTTCATAACCTTTAAGTCCCTAACTCTCACTGTAATTACATTCAAT TATTGGTTCCAAGTTTTTGAAGTTTTGTGGATTGTTCAGTTGTAGTTTTGCATCTTAATGATGTGTTGGTTGATGGGGAA AAATATCAATGTGGAAAGATACACTGTGATCTATTTGACTTATTTGACTTCAACAACATACAGAAATGCGAAAGTAGTAT TCACATGCACATATACTTCTCTCACGTACATGAGTTATCAGTTCATTTGTGTTATTCTGCTTGAAAGCTTATTGTTGCTG TCAGAGTTAACCTGAATCTGAATTCAACTGATGACTGATATTTGACTTGTTACTGTATTAATTTTGTAAGTGTATACTGT ATTGTCATCATTATTCCTATTAATCGTTTGGTGACGTGCATGTGATGATGTTTTAAGAATGGAAGTAAAGCTGAAAGTTG AAATATGAAACAGATTTTTTATTTCAGCAGAAATGGTTATTGGGTTTAGGGTCTTCTGCACTTCCCGTTCTGATTTATCA GGTCTAATGCAATGCCTATTGTGATTTAATAAATTAAACACATTCCCAATACTATAACATGACCTTTGCAGTGTGCCAAA TCAAGTGTCAACTTTGATGGTATGGGTATCACATGCAACTCATATGATCAATGGGCTAGGAAAAGGAATCCTTAATGAAA TTGCTTTCTGTGAAGTTATTGTAAGCTTCCCCCATGCATTGTCTTTTATGACCTGTATTTCTTAAGGAAAGAGAAACGGG GAATATTCCATTAGGGCATAACATGTAGTCATGAGCTGACTAGCATATTTAAATTTTGAGAGCTTCTATATGTTACGAAT ACAGCCTCCACGAATCGTAAGAACCAAGGACGTGGCAAGTACATGTTGGATGTTTGACGGGAAAAAGAGGAGGTGTGTTG TTTAATATGCAAGTCCATGCATTTCATTCCCGTAACAATTATAATTTTCCTTAAATTTTATTACTTTTAGCTCTTAAGGA AGTGGTTTGTACTTTGTAAAATTATTAACCTAACGAAAATAGCTTTTACTTTGCACAAAATCTCTAAACAATATATCACT TGTTTTGCACAAATTTAAAATATTTTTTCTTTGACTTGAAACAGAATTTTGTCTCTTATTAAAACTCTAGAATCTAGAAG TTTGTCCTGATGTAATTTTTTTATTAACTTGAATGTTAATAAGGCTTGTACAATTTAAGTTTGCACCATGGGCAGCCAGA ACACTGTTCTTCTTTGACATTAAATTATTCCTATTTGTTAAAATAAGAAATATATTAGAGAATAATGACAGGAAAACCCT ATGAGTGTGTTTTATTTGTGTTTGTGTTTTTTATTTCAGATTTATTCATTTCTGTAAGAAAATTTTGAAAACTAAAATTT GAATAAAAACAACGTTGAATTTTGTATTTATGGGTCACTTTTACTTTTTTTCGTTATTTTGAACCAGTGAATCTTTCGGT CCGGTCCGGCCTTCCAGTTACGAAGTGGATTGCTCCACTGCAGGATTGGCAGCAGGTTGACCTCCTGCTGGATCCTGCAC GTGCAAGGTATACCCACCCGAGCCATTCTTCTTCCACTCACTCTCATAATGAAAAAAGACATTTGGGCCTCATCGAAAAA AGTATCTGCGTGTGATAGGTTCTTTCCGGCCGCGAGAAAAATGCCTCCTCTATGAATTCTCAGTGCTCCCTAGCTCCTGA AGAAGATTTCAGGATCCACCTTTGGTCTTAAATCCTGTCAACTTAAAATAAAAACAAGAGAAATAACTAAACAGGCTCTC AGAATGCAGAATCCTGAAGAGAGAGAGAGGGAGAGGCAGAGGCAGAGAGAGATAATCAAATCTTACCAGTCTCTTTACAC CATACCCTTTCTACCTGTTTGGAAATGAATGAGGAAATTGAAATAAGATTACATGTATACATTATCAAGGAACCTCGAGT CAAAATAGTAATTTCATTGCATGTATCAGGTTGAAAATTCTTTTTCATTAGGGTGAAATGATACTCTTTGCTAGACTCTG TTAAGTGTCAGTACATTTCTTGGGAGAAGGAACTTATTGTCTAGAATTTATATGGATGTGCTTTCATGCCATCTTGATAC TACACCTTGGAAGTAATCAATGCTACCAGAAACCAAGGAAGAACCATGATATATTTGTTATTAAAAACTTTTATATAGTT CCCAACATTGCCTTTATTTCCTTATTGAACTTAAGTTCAGTTAAGGTAAAGCTGAAGATGAGTAGGGAGGACTGAATCAG TTCTCCTGTTTAAGAGTTCATTACCACTCAATACCTTCCTATTTTCCGCTTTACCAAATGTGATCTTGGGGTCATTAATG GTAGTTTGAGCTTAAGCTCATCAGATTTGCAAGGCTTAATTCGCTTGAAGGTTGGCAGGGTTGACCTCAAACATCTAAGA CATCTGGTGCTTAGGGAAATATGAATTGTCTGCATTTTCTGTGATTAGGTTTATCTGCTTAGTGATATTTAAGGTGATAG GGACTTCTCTGCATAACGCATCCCTGTCCTGCTGTCAATATGGTCTTTAGTTTTGCATGATTGATGATTTTCTACAGGCT TTTAATTTTTTATTAAAAAAATCTAGACTAGTTCTGTGATTATCTTTAGCAAATCTTATCTTTCTAGTGAAAATCTGCAT ACTAGATTGAGAATCCTGATTGCTTGGAGTTCACTTTTTTTTCTTTAGTTTAGAAATCTGGTATTGTATTTCATTGATTG ATGTGTTACGTGGATGGGTGAATAGGATTAGGAATGAGAAAAATGGAGAGCTGGTTGGGGTAGCATCTATTGTGGAAAAT GGCAATCTTGCTTAAGGAGGTTTGGGCATGTATAGAAAAGACCCGTAAAAACACTAATAAAGAGGTAGATCAAATAAGGA TTTGGGTTGGTATATCATTAGACTATATTAAGTCATCCTTTGATCCATGTAACTGATTCCTTTAGTGGTAAAACATTTTG GTTGCTGCATATTTCATTTATTGATGTGATTAGTTTTAAATCATCCCTTCAAAAGTCTAAGGCTCACTAGCAATGCAGGT TGCAGAACGAGCCCTCTTTTTGTGGAATAATGAGCACATTGTCAGCTTAATTGCGCAAAACAGGACTGTAGTATTACCAA TAATATTTGAAGCATTGGAGAAAAACATCCAGAGTCATTGGAACCAGGCAGTTAACGGGCTAACCGTAAACGTTCGGAAA ATGTTCCTGGAAATGGATGCTGAATTGTTTGAAGAGTGTCAGAGACAGTATGCAGAAAGAGAGGCTAAAGCCAATGAGGT GGAAGAGCAGCGACAATTGAATTGGAAGAAACTAGCAGAGGTGGCTGCACAGAACAGGGTGGATATGGTCACAGCATAG
CDS sequence (LotjaGi1g1v0686300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCAAGAGAATAATGAAAGGAGGAGGAGGGCAGAAGAAGCCCTCAAAATCCGACCCCACCGATCAATCCGCCTACGG GTACGGTCCCCCGGCGGCGGTGGAGGTTCCACCGCCGTCGGGAACCATCGAGCCGCTCCCCCTCTTCCGCGACGTTCCGG TTTCCGAGAGGCAGAACCTCTTCCTGCGGAAACTGCAAGTCTGCTGCCACCTGCTGGACTTCTCCGACACGCTGAAATCG GTCCGGGAGAAGGAAATCAAACGGCAGTCGCTGATGGAGTTGGTGGATTTCATCCAGTCCGGTTCCGGCAAGATAACGGA GACTTGCCAGGAAGAGATGATCAGAATGGTGTCAGTCAACATTTTCCGGTGCTTGCCGCCGGCGTCTCATGAGAATACAG GGCAGGAAGCCGGTGACCCTGATGAGGATGAGCCGTGTTTGGACCCGGCGTGGCCGCACTTGCAGCTAGTCTATGAGCTT CTTCTCAGATATGTGGTTTCATCTGATACTGATACAAAGGTAGCTAAACGGTACATTGATCATTCTTTTGTGCTTAAGTT GCTTGATTTGTTTGATTCTGAGGATCCGCGCGAGCGCGAGTATTTGAAGAACATTTTGCATCGTGTGTATGGGAAATTCA TGGTTCATAGACCGTTTATTAGGAAGGCGATTAACAACATTTTTTACCGGTTTATATACGAGACCGAAAGGCATAGTGGG ATTGGGGAGCTTTTGGAGATTCTAGGGAGTATCATTAATGGTTTTGCATTGCCCATGAAGGAGGAGCACAAGTTGTTCCT TGTGAGGGCTCTTCTGCCTCTGCATAAGCCTAAGCCTGTAGCTTTGTACCATCAGCAGTTGTCCTACTGCATATCTCAGT TTGTGGAGAAGGATCACAAGCTCGCGGATACTGTTATTAGGGGCTTGTTGAAGTACTGGCCTGTCACCAATTGCCAGAAG CAAGTTCTCTTTCTTGGAGAGCTGGAGGAGGTGCTGGAGGCCACACAGGCTGCAGAGTTCCAGCGCTGCATGGTTCTTCT TTTTAGACAGATTGCACGCTGCCTCAATAGTTCTCATTTTCAGGTTGCAGAACGAGCCCTCTTTTTGTGGAATAATGAGC ACATTGTCAGCTTAATTGCGCAAAACAGGACTGTAGTATTACCAATAATATTTGAAGCATTGGAGAAAAACATCCAGAGT CATTGGAACCAGGCAGTTAACGGGCTAACCGTAAACGTTCGGAAAATGTTCCTGGAAATGGATGCTGAATTGTTTGAAGA GTGTCAGAGACAGTATGCAGAAAGAGAGGCTAAAGCCAATGAGGTGGAAGAGCAGCGACAATTGAATTGGAAGAAACTAG CAGAGGTGGCTGCACAGAACAGGGTGGATATGGTCACAGCATAG
Protein sequence (LotjaGi1g1v0686300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFKRIMKGGGGQKKPSKSDPTDQSAYGYGPPAAVEVPPPSGTIEPLPLFRDVPVSERQNLFLRKLQVCCHLLDFSDTLKS VREKEIKRQSLMELVDFIQSGSGKITETCQEEMIRMVSVNIFRCLPPASHENTGQEAGDPDEDEPCLDPAWPHLQLVYEL LLRYVVSSDTDTKVAKRYIDHSFVLKLLDLFDSEDPREREYLKNILHRVYGKFMVHRPFIRKAINNIFYRFIYETERHSG IGELLEILGSIINGFALPMKEEHKLFLVRALLPLHKPKPVALYHQQLSYCISQFVEKDHKLADTVIRGLLKYWPVTNCQK QVLFLGELEEVLEATQAAEFQRCMVLLFRQIARCLNSSHFQVAERALFLWNNEHIVSLIAQNRTVVLPIIFEALEKNIQS HWNQAVNGLTVNVRKMFLEMDAELFEECQRQYAEREAKANEVEEQRQLNWKKLAEVAAQNRVDMVTA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 466 | 466 | 7.1E-301 | – | |
| MobiDBLite | 1 | 30 | 30 | - | – | |
| PANTHER | 1 | 466 | 466 | 7.1E-301 | ||
| PIRSF | 13 | 466 | 454 | 3.4E-237 | ||
| Pfam | 46 | 457 | 412 | 2.1E-188 | ||
| Gene3D | 53 | 456 | 404 | 2.3E-188 | ||
| SUPERFAMILY | 58 | 439 | 382 | 5.76E-157 | ||
| Coils | 425 | 445 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Protein phosphatase type 2A complex | A protein complex that has protein serine/threonine phosphatase activity that is polycation-stimulated (PCS), being directly stimulated by protamine, polylysine, or histone H1; it constitutes a subclass of several enzymes activated by different histones and polylysine, and consists of catalytic, scaffolding, and regulatory subunits. The catalytic and scaffolding subunits form the core enzyme, and the holoenzyme also includes the regulatory subunit. | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Molecular function | Protein phosphatase regulator activity | Modulates the activity of a protein phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a protein substrate molecule. |
Expression pattern of LotjaGi1g1v0686300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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