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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002554
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We have found 46 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.039s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0173849.1
n.a. PREDICTED: serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform-like [Glycine max] gi|356567369|ref|XP_003551893.1| chr0 83754692 83755027 -
3 domain predictions
3 GO terms
Lj0g3v0187179.1
n.a. PREDICTED: serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform-like [Glycine max] gi|356571427|ref|XP_003553878.1| chr0 91312836 91314596 +
3 domain predictions
3 GO terms
Lj0g3v0196609.1
n.a. Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform [Medicago truncatula] gi|357466365|ref|XP_003603467.1| chr0 95854005 95855425 -
3 domain predictions
3 GO terms
Lj0g3v0274839.1
n.a. Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform [Medicago truncatula] gi|357466365|ref|XP_003603467.1| chr0 142508692 142511539 +
3 domain predictions
3 GO terms
Lj0g3v0308049.1
n.a. Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform [Medicago truncatula] gi|357463117|ref|XP_003601840.1| chr0 160818314 160823377 +
4 domain predictions
3 GO terms
Lj0g3v0330599.1
n.a. PREDICTED: serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' zeta isoform-like [Cicer arietinum] gi|502134190|ref|XP_004502031.1| chr0 172776974 172779499 -
3 domain predictions
3 GO terms
Lj0g3v0330599.2
n.a. PREDICTED: serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' zeta isoform-like [Cicer arietinum] gi|502134190|ref|XP_004502031.1| chr0 172776974 172779499 -
3 domain predictions
3 GO terms
Lj1g3v4615530.1
n.a. PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like [Cicer arietinum] gi|502111509|ref|XP_004494078.1| chr1 55163432 55168772 +
4 domain predictions
3 GO terms
Lj2g3v2902520.1
n.a. PREDICTED: serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform-like [Glycine max] gi|356554460|ref|XP_003545564.1| chr2 37829316 37839016 +
3 domain predictions
3 GO terms
Lj2g3v2902520.3
n.a. PREDICTED: serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform-like [Glycine max] gi|356554460|ref|XP_003545564.1| chr2 37832600 37839016 +
4 domain predictions
3 GO terms
Lj4g3v1789190.1
n.a. PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform-like isoform 1 [Glycine max] gi|356563081|ref|XP_003549794.1| chr4 25406356 25410202 +
4 domain predictions
3 GO terms
Lj4g3v1789200.1
n.a. PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform-like isoform 1 [Glycine max] gi|356563081|ref|XP_003549794.1| chr4 25406356 25410764 +
4 domain predictions
3 GO terms
Lj4g3v2513890.1
n.a. PREDICTED: serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform-like [Glycine max] gi|356540191|ref|XP_003538573.1| chr4 33990993 33992779 -
4 domain predictions
3 GO terms
Lj5g3v0550190.1
n.a. PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform-like [Cicer arietinum] gi|502124695|ref|XP_004498632.1| chr5 6529037 6533096 -
4 domain predictions
3 GO terms
Lj5g3v2220300.1
n.a. PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like [Cicer arietinum] gi|502120921|ref|XP_004497127.1| chr5 32002529 32005678 +
4 domain predictions
3 GO terms
Lj5g3v2246130.1
n.a. PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' alpha isoform-like [Glycine max] gi|356534431|ref|XP_003535758.1| chr5 32610838 32613233 -
3 domain predictions
3 GO terms
Lj6g3v1055560.1
n.a. PREDICTED: serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' zeta isoform-like [Cicer arietinum] gi|502134190|ref|XP_004502031.1| chr6 12061242 12067310 +
4 domain predictions
3 GO terms
LotjaGi1g1v0063000.1
n.a. Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT4G15415.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|Q8RW96|2A5G_ARATH Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform; TrEMBL-Plants: tr|A0A0L9UV59|A0A0L9UV59_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0063000 LjG1.1_chr1 8764823 8774389 -
4 domain predictions
3 GO terms
LotjaGi1g1v0389200.1
n.a. Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT5G25510.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|Q93YV6|2A5I_ARATH Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform; TrEMBL-Plants: tr|A0A0L9UH95|A0A0L9UH95_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0389200 LjG1.1_chr1 87269051 87272361 -
4 domain predictions
3 GO terms
LotjaGi1g1v0389200.2
n.a. Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT5G25510.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|Q93YV6|2A5I_ARATH Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform; TrEMBL-Plants: tr|G7JBQ2|G7JBQ2_MEDTR Protein phosphatase 2A regulatory B subunit family protein; Found in the gene: LotjaGi1g1v0389200 LjG1.1_chr1 87269183 87271664 -
4 domain predictions
3 GO terms
LotjaGi1g1v0389200.3
n.a. Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT5G25510.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|Q93YV6|2A5I_ARATH Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform; TrEMBL-Plants: tr|A0A0L9UH95|A0A0L9UH95_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0389200 LjG1.1_chr1 87269230 87271695 -
4 domain predictions
3 GO terms
LotjaGi1g1v0686300.1
n.a. Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT3G09880.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|O04376|2A5B_ARATH Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform; TrEMBL-Plants: tr|A0A0S3RYS9|A0A0S3RYS9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0686300 LjG1.1_chr1 125347292 125352883 +
4 domain predictions
3 GO terms
LotjaGi1g1v0686300.2
n.a. Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT3G09880.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|O04376|2A5B_ARATH Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform; TrEMBL-Plants: tr|A0A0S3RYS9|A0A0S3RYS9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0686300 LjG1.1_chr1 125347549 125352355 +
4 domain predictions
3 GO terms
LotjaGi1g1v0686300.3
n.a. Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT3G09880.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|O04376|2A5B_ARATH Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform; TrEMBL-Plants: tr|A0A0S3RYS9|A0A0S3RYS9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0686300 LjG1.1_chr1 125347557 125352355 +
4 domain predictions
3 GO terms
LotjaGi1g1v0686300.4
n.a. Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT5G03470.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|O04375|2A5A_ARATH Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' alpha isoform; TrEMBL-Plants: tr|A0A0S3RYS9|A0A0S3RYS9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0686300 LjG1.1_chr1 125347740 125349114 +
4 domain predictions
3 GO terms
LotjaGi1g1v0686300.5
n.a. Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT5G03470.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|O04375|2A5A_ARATH Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' alpha isoform; TrEMBL-Plants: tr|A0A0S3RYS9|A0A0S3RYS9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0686300 LjG1.1_chr1 125347740 125352355 +
4 domain predictions
3 GO terms
LotjaGi2g1v0083600.1
n.a. Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT4G15415.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|Q8RW96|2A5G_ARATH Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform; TrEMBL-Plants: tr|I1N7G3|I1N7G3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0083600 LjG1.1_chr2 23027799 23033753 -
4 domain predictions
3 GO terms
LotjaGi2g1v0083600.2
n.a. Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT4G15415.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|Q8RW96|2A5G_ARATH Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform; TrEMBL-Plants: tr|I1N7G3|I1N7G3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0083600 LjG1.1_chr2 23028232 23033741 -
4 domain predictions
3 GO terms
LotjaGi2g1v0083600.3
n.a. Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT4G15415.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|Q8RW96|2A5G_ARATH Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform; TrEMBL-Plants: tr|I1N7G3|I1N7G3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0083600 LjG1.1_chr2 23029327 23032866 -
4 domain predictions
3 GO terms
LotjaGi2g1v0088800.1
n.a. Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT3G21650.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|Q9LVE2|2A5Z_ARATH Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' zeta isoform; TrEMBL-Plants: tr|A0A0L9UV59|A0A0L9UV59_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0088800 LjG1.1_chr2 25888808 25891744 +
3 domain predictions
3 GO terms
LotjaGi2g1v0088800.2
n.a. Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT3G21650.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|Q8RW96|2A5G_ARATH Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform; TrEMBL-Plants: tr|A0A0L9UV59|A0A0L9UV59_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0088800 LjG1.1_chr2 25888808 25891744 +
3 domain predictions
3 GO terms
LotjaGi2g1v0088800.3
n.a. Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT3G21650.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|Q9LVE2|2A5Z_ARATH Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' zeta isoform; TrEMBL-Plants: tr|A0A0L9UV59|A0A0L9UV59_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0088800 LjG1.1_chr2 25888829 25891565 +
3 domain predictions
3 GO terms
LotjaGi4g1v0264700.1
n.a. Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT5G25510.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|Q93YV6|2A5I_ARATH Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform; TrEMBL-Plants: tr|V7CE13|V7CE13_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0264700 LjG1.1_chr4 62915976 62920904 +
4 domain predictions
3 GO terms
LotjaGi4g1v0264700.2
n.a. Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT5G25510.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|Q93YV6|2A5I_ARATH Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform; TrEMBL-Plants: tr|V7CE13|V7CE13_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0264700 LjG1.1_chr4 62917653 62919762 +
4 domain predictions
3 GO terms
LotjaGi4g1v0363200.1
n.a. Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT3G26020.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|Q9LU89|2A5N_ARATH Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform; TrEMBL-Plants: tr|A0A0B2SHR4|A0A0B2SHR4_GLYSO Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform; Found in the gene: LotjaGi4g1v0363200 LjG1.1_chr4 74229566 74236654 -
4 domain predictions
3 GO terms
LotjaGi5g1v0062800.1
n.a. Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT5G25510.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|Q93YV6|2A5I_ARATH Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform; TrEMBL-Plants: tr|G7I6A8|G7I6A8_MEDTR Protein phosphatase 2A regulatory B subunit family protein; Found in the gene: LotjaGi5g1v0062800 LjG1.1_chr5 10556396 10560684 -
4 domain predictions
3 GO terms
LotjaGi5g1v0084100.1
n.a. Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT3G09880.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|O04376|2A5B_ARATH Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform; TrEMBL-Plants: tr|A0A0L9TW93|A0A0L9TW93_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0084100 LjG1.1_chr5 14293303 14301040 -
4 domain predictions
3 GO terms
LotjaGi5g1v0084100.2
n.a. Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT3G09880.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|O04376|2A5B_ARATH Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform; TrEMBL-Plants: tr|K7LZS7|K7LZS7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0084100 LjG1.1_chr5 14294181 14300623 -
4 domain predictions
3 GO terms
LotjaGi5g1v0084100.3
n.a. Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT3G09880.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|O04376|2A5B_ARATH Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform; TrEMBL-Plants: tr|K7LZS7|K7LZS7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0084100 LjG1.1_chr5 14294181 14300638 -
4 domain predictions
3 GO terms
LotjaGi5g1v0084100.4
n.a. Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT3G09880.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|O04376|2A5B_ARATH Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform; TrEMBL-Plants: tr|K7LZS7|K7LZS7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0084100 LjG1.1_chr5 14294181 14300638 -
4 domain predictions
3 GO terms
LotjaGi5g1v0084100.5
n.a. Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT3G09880.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|O04376|2A5B_ARATH Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform; TrEMBL-Plants: tr|V7BFM4|V7BFM4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0084100 LjG1.1_chr5 14294181 14300638 -
4 domain predictions
3 GO terms
LotjaGi5g1v0342400.1
n.a. Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT3G09880.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|O04376|2A5B_ARATH Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform; TrEMBL-Plants: tr|A0A072VQI0|A0A072VQI0_MEDTR Protein phosphatase 2A regulatory B subunit family protein; Found in the gene: LotjaGi5g1v0342400 LjG1.1_chr5 65949259 65952841 +
4 domain predictions
3 GO terms
LotjaGi5g1v0350500.1
n.a. Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT3G26020.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|Q9LU89|2A5N_ARATH Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform; TrEMBL-Plants: tr|A0A072VRL4|A0A072VRL4_MEDTR Protein phosphatase 2A regulatory B subunit family protein; Found in the gene: LotjaGi5g1v0350500 LjG1.1_chr5 66649820 66652812 -
3 domain predictions
3 GO terms
LotjaGi5g1v0350500.2
n.a. Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT3G26020.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|Q9LU89|2A5N_ARATH Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform; TrEMBL-Plants: tr|A0A072VRL4|A0A072VRL4_MEDTR Protein phosphatase 2A regulatory B subunit family protein; Found in the gene: LotjaGi5g1v0350500 LjG1.1_chr5 66650186 66652812 -
3 domain predictions
3 GO terms
LotjaGi6g1v0100100.1
n.a. Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT3G26020.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|Q9LU89|2A5N_ARATH Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform; TrEMBL-Plants: tr|G7J2I4|G7J2I4_MEDTR Protein phosphatase 2A regulatory B subunit family protein; Found in the gene: LotjaGi6g1v0100100 LjG1.1_chr6 21741921 21747270 +
4 domain predictions
3 GO terms
LotjaGi6g1v0196800.1
n.a. Serine/threonine protein phosphatase 2A regulatory subunit B; TAIR: AT4G15415.1 Protein phosphatase 2A regulatory B subunit family protein; Swiss-Prot: sp|Q8RW96|2A5G_ARATH Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform; TrEMBL-Plants: tr|A0A0L9UV59|A0A0L9UV59_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0196800 LjG1.1_chr6 49379815 49386743 -
4 domain predictions
3 GO terms