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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0696600 |
| Transcript ID | LotjaGi1g1v0696600.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat-containing protein; TAIR: AT1G07710.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q6AWW5|Y5262_ARATH Ankyrin repeat-containing protein At5g02620; TrEMBL-Plants: tr|G7L0Q4|G7L0Q4_MEDTR Ankyrin repeat plant protein; Found in the gene: LotjaGi1g1v0696600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:126436846..126440696) extracted from Lotus japonicus Gifu genome v1.2.
TGTTCAAAAGCGAAAAGAGAGACGGAACTTAAGACAAAGACCAAAAAAAGACAGAGAGCACAATGACAAACAATGGTAAC GTCAGCTTGTTCCTAGTGGAAAATGCAGGCCAAACCATTGAGCATCATGATCCGGCATGGGACCACTGTATTCAAAGTTT GAAACTTTGCAAACAATCTAACCTAACAGCTCCATTTTGTTGCCTAACTTTCTTCTTCACGTCTCAACCACGCCTCTCAA AGGGGCTAACTTTTTCTTCATGCCCCTGATTGGAGTTATCTTCCTCATTCCATTTCTCCTCTTCAGCTCCTAGATCTTTG GAAAGCACAACCTGCTGTGTCTTATTGGAGATTGAAGATTGGGTTAGTTGATGTTTTCTTAATTTATTTCCATTGCTACT TACTAATTTTGAGAAAAAAATGATTTTTTTTTGTTACTTTTGTTTTTCAGTAGATGTTGCATCAAAATTGTTTCCCCTGC ACCAAAAAAATAAATGTTGCTTTGTATCAATTTTGGGGTTCAAGGACTTACCCTTTAGGTTTTTTTTTCCTCCATACTAT GCAGCTATCTCAAATTGATGTTTGAAGCAAAAGAAGTGGAGTTTTGTTGGATGCTGAACTATGGATGCTGAAGTGGTCAG CATGTGAACCTGGACCTTGAGTGTGATACTGTCCAATTTTGGATTCCCTTGCCAATATTGTTCAGTGAATTGATATTTGG GTTTGGGGAGACAAGCAATGAGTTTAACTTGGGTATGTCTTGAGAAAATGTGAACAAGTTGGAGCTCCATCAAAGCAGTG ATAAGCATTTCAAAAGAAGATGAAGAAACAGTTGACGGGTTTACGGGGGGATTCTCCCCTGCAATCAGCAATCCGGGATG GAAATTTAGAATTGGTGATGGAAATCATCTCTCAGAGTCAGAAAGATGAAGAGTTGAAAGAGTTGCTTTCCAGGACGAAT AACTCTGGTGAAACTGCCTTGTATGTTGCAGCTGAAAATGGTCATCTTGATATAGTGAAGGAATTGATCAGATACCATGA TATTGGTTTGGCCAGCTTGAAAGCTAGAAATGGATTTGATGCATTTCATGTTGCTGCTAAAAATGGAAACTTAGGTAAGT CTATTTAATGCATTCAATGTCCTCACCATAGATATTTTGTACCTTGGTCTGTACAACATTTATCTACCATATGATTAGGG TATTTGCTTAATCTCATTTGAGCATACAGACACTTTGATGAATGATTATATCAACTCTTTGCTTACTATGTCAAAAACTT ATTTATTTATTTATTTAATTGATGCCCAAATAATATATATTATTTCTACATGATTTGAGTTCTTGTTTCAAAATTGGCAA AATCTTTAAGTCCGCTCACTTTCAAGGTTTCCCATTGACCCTCATTTTTTCAATCATAACAATTATAAATTTATATTTTA TAATCAATTTAACCTTTCGAATTTGTCTGAGTCTTTGTTCTTTTACTGGTTTGCAGAGATATTGAAGGTCCTCATGGAGG CCTTTCCTGAAATTTCAATGACAGTTGATCTGTCAAACACTACTGCATTGCACACTGCTGCAGCACAAGGACATATCCAT GTTGTAAATTTTCTCTTGGAGAAAGGTTACAGCCTGATAAGTATTGCAAAAAGCAATGGGAAAACTGTGTTGCATTCGGC TGCAAGAAACGGCCACGTGGAGGTCATCAAGGCCATTCTAAGCAGAGAGCCTGAAATTGCAATGAGAATTGATAAGAAGG GGCAGACAGCACTCCATATGGCAGTTAAAGGACAAAACCTTGAATTGGTGGATGAGCTTGTGACATTGACTCCATCTTCG GTTAATATGGTGGATGCCAAAGGAAACACTGCACTGCATATAGCAACCCGGAAGAGTCGTCTAAAGGTACGGAAAAAACA CAAGAAAACTGCCTTCCTGATTTTTCTTTCTTAAGTAGATACTGATCTTGTGTTCTTTCCTTCTAAGACCTTGAACAGCA CAAACTAAATTTCCTTATTAGTTCCAGATGTGATACTTCAGATGAGGTCTGCTTTTACTAACACTGATAACAACTGCATA TTTGTATTAGAACTTTTTCGAAATTAAAATTTGAAGTGAAGAATATTTAAAAGAATTTCTGTATGTGTCTGGTTTGTCTA AAGAATGAAAGAAGTGAACTTTCAACTTACTTTATTCAGCACTTTTAGTGGTAGACGTGCACTGTATATCAATTGAGCTG TAAATGTGAGTGCAATTACTATCCTGTCTTGTGGTAAAACTTAAAGGTGTGGTGGTATAAATGCAATAAGTTAGTAATTG ATAGAATCTGTTTTGTTTATTTTTTGTTTGTGATATACAGTGTGTTCTGCATAAATTTTAATATCGTACAATTTGTATTA GTCCTAAGCTGAACTTCTGGTTGAGCTAATTAGCATAAGCAGTTTTTAGGTCCTGCAACCATAGTAAGCAAACTCACCAT CGTTTTCTTGTGCTGATCTTGCAGATTATTCAGAGGTTACTAGATTGCAGTGAAATAGACACAAACGTTATCAATAAATC TGGAGAAACTGCTTTGGATATTGCAGAGAGAAGTAGTCACTTGGAAATTACCAACTCTCTACAAGATCATGGAGCTCAAA ATGCTAAGTCCATCAGGTCATCTTCCAGAAACCCAGCCCTTGAACTCAAACGGACTGTGAGTGACATAAAAAGCGGGGTA CATAACCAGCTGGAACACACATTTAAAACGCAAAGGCGTATGAAAGGCATAGCCAAGCGAATTAACAAGATGCATGCTGA GGGGCTTAACAATGCAATCAACTCCAATACCGTTGTTGCTGTCCTCATCGCAACAGTGGCTTTCGCTGCCATATTTACTG TCCCAGGCCAGTATCCTAGAAACCCAGAGGAACTCGCTCCTGGAATGTCTCCGGGAGAAGCAAACATTGCTCCGAATACC GAATTCTTGATATTCATGATCTTTGATTCTACTGCCTTATTCATATCATTGGCTGTTGTGGTTGTCCAAACATCTGTGGT TATTATAGACAGGAAGACAAAGAAACAAATGACAGCAGTTATAAATAAGTTAATGTGGATAGCCTGTGTGCTAATTTCTG TGGCATTCATGGCAATGTCTTACATAGTTGTGGGGGATCACAAAGAGTTGGCTATTGCAGCCACAGTTCTAGGAACAGTG ATTATGGTAGCTACTCTAGGAACACTCTGTTATTGGGTGATCGCCCACCGCCTTGAAGCATCCAGATTGAGAAGTCAACG GACAATGACAAGCAGCAGGCAGTCATTCGCTATGTCAATGATGTCAGATCATGAGAATGAGTTTAAGACAGTGTACGCTA TATAATTTTGATTCTACCATTTCAGATCACACCTCTTTCTTTTGTTGTCTAATTACACTAACATAGATTCCGGCTTTTGG TTCTTAGTAGCATGCCCATTGTAGAACACTGGCAAAGAATGTAGTCATAGTCTTGTTGTTAGTAAATACTAAACATGTCA TTCTAAATTGAAGTTTTGGATGATGCTCGATCTCACAACATTTGTTTCTTCTGAACATCATTGTGTTATCGCTTGCAATA ACTTTGCAATGAAATTTCTGGTGCTTCTTACATCAAGTGAGTGTATGTTTGGTTTCCCATTGAGGAAACTCAGAATTAGT TCTCACGGGAGAAACCCACTTTAGATAACAATACAAATGTTTAAGAGCCATCTCAAAGAGTTGATTCCAGTTTCCAGCCC CAGAATCAATTATGGTTGAAGTTAGAGAGAGTTGATTTTGCGTTGAACATAATCAATTGTGATATTATGCAACTAAATTT CATAACATTAC
CDS sequence (LotjaGi1g1v0696600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGAAACAGTTGACGGGTTTACGGGGGGATTCTCCCCTGCAATCAGCAATCCGGGATGGAAATTTAGAATTGGTGAT GGAAATCATCTCTCAGAGTCAGAAAGATGAAGAGTTGAAAGAGTTGCTTTCCAGGACGAATAACTCTGGTGAAACTGCCT TGTATGTTGCAGCTGAAAATGGTCATCTTGATATAGTGAAGGAATTGATCAGATACCATGATATTGGTTTGGCCAGCTTG AAAGCTAGAAATGGATTTGATGCATTTCATGTTGCTGCTAAAAATGGAAACTTAGAGATATTGAAGGTCCTCATGGAGGC CTTTCCTGAAATTTCAATGACAGTTGATCTGTCAAACACTACTGCATTGCACACTGCTGCAGCACAAGGACATATCCATG TTGTAAATTTTCTCTTGGAGAAAGGTTACAGCCTGATAAGTATTGCAAAAAGCAATGGGAAAACTGTGTTGCATTCGGCT GCAAGAAACGGCCACGTGGAGGTCATCAAGGCCATTCTAAGCAGAGAGCCTGAAATTGCAATGAGAATTGATAAGAAGGG GCAGACAGCACTCCATATGGCAGTTAAAGGACAAAACCTTGAATTGGTGGATGAGCTTGTGACATTGACTCCATCTTCGG TTAATATGGTGGATGCCAAAGGAAACACTGCACTGCATATAGCAACCCGGAAGAGTCGTCTAAAGATTATTCAGAGGTTA CTAGATTGCAGTGAAATAGACACAAACGTTATCAATAAATCTGGAGAAACTGCTTTGGATATTGCAGAGAGAAGTAGTCA CTTGGAAATTACCAACTCTCTACAAGATCATGGAGCTCAAAATGCTAAGTCCATCAGGTCATCTTCCAGAAACCCAGCCC TTGAACTCAAACGGACTGTGAGTGACATAAAAAGCGGGGTACATAACCAGCTGGAACACACATTTAAAACGCAAAGGCGT ATGAAAGGCATAGCCAAGCGAATTAACAAGATGCATGCTGAGGGGCTTAACAATGCAATCAACTCCAATACCGTTGTTGC TGTCCTCATCGCAACAGTGGCTTTCGCTGCCATATTTACTGTCCCAGGCCAGTATCCTAGAAACCCAGAGGAACTCGCTC CTGGAATGTCTCCGGGAGAAGCAAACATTGCTCCGAATACCGAATTCTTGATATTCATGATCTTTGATTCTACTGCCTTA TTCATATCATTGGCTGTTGTGGTTGTCCAAACATCTGTGGTTATTATAGACAGGAAGACAAAGAAACAAATGACAGCAGT TATAAATAAGTTAATGTGGATAGCCTGTGTGCTAATTTCTGTGGCATTCATGGCAATGTCTTACATAGTTGTGGGGGATC ACAAAGAGTTGGCTATTGCAGCCACAGTTCTAGGAACAGTGATTATGGTAGCTACTCTAGGAACACTCTGTTATTGGGTG ATCGCCCACCGCCTTGAAGCATCCAGATTGAGAAGTCAACGGACAATGACAAGCAGCAGGCAGTCATTCGCTATGTCAAT GATGTCAGATCATGAGAATGAGTTTAAGACAGTGTACGCTATATAA
Protein sequence (LotjaGi1g1v0696600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKKQLTGLRGDSPLQSAIRDGNLELVMEIISQSQKDEELKELLSRTNNSGETALYVAAENGHLDIVKELIRYHDIGLASL KARNGFDAFHVAAKNGNLEILKVLMEAFPEISMTVDLSNTTALHTAAAQGHIHVVNFLLEKGYSLISIAKSNGKTVLHSA ARNGHVEVIKAILSREPEIAMRIDKKGQTALHMAVKGQNLELVDELVTLTPSSVNMVDAKGNTALHIATRKSRLKIIQRL LDCSEIDTNVINKSGETALDIAERSSHLEITNSLQDHGAQNAKSIRSSSRNPALELKRTVSDIKSGVHNQLEHTFKTQRR MKGIAKRINKMHAEGLNNAINSNTVVAVLIATVAFAAIFTVPGQYPRNPEELAPGMSPGEANIAPNTEFLIFMIFDSTAL FISLAVVVVQTSVVIIDRKTKKQMTAVINKLMWIACVLISVAFMAMSYIVVGDHKELAIAATVLGTVIMVATLGTLCYWV IAHRLEASRLRSQRTMTSSRQSFAMSMMSDHENEFKTVYAI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 339 | 339 | - | – | |
| PANTHER | 1 | 521 | 521 | 0.0 | – | |
| PANTHER | 1 | 521 | 521 | 0.0 | – | |
| Gene3D | 2 | 109 | 108 | 4.2E-20 | ||
| SMART | 9 | 38 | 30 | 120.0 | ||
| Pfam | 9 | 75 | 67 | 2.2E-9 | ||
| ProSiteProfiles | 9 | 280 | 272 | 54.885 | ||
| SUPERFAMILY | 13 | 279 | 267 | 3.73E-59 | ||
| ProSiteProfiles | 49 | 71 | 23 | 9.698 | ||
| SMART | 49 | 77 | 29 | 0.0026 | ||
| Pfam | 82 | 144 | 63 | 3.9E-10 | ||
| SMART | 84 | 113 | 30 | 9.7E-4 | ||
| ProSiteProfiles | 84 | 116 | 33 | 9.618 | ||
| Gene3D | 110 | 302 | 193 | 6.6E-42 | ||
| ProSiteProfiles | 118 | 150 | 33 | 10.633 | ||
| SMART | 118 | 148 | 31 | 0.081 | ||
| Pfam | 151 | 215 | 65 | 4.6E-11 | ||
| ProSiteProfiles | 152 | 184 | 33 | 10.553 | ||
| SMART | 152 | 181 | 30 | 9.5E-5 | ||
| SMART | 186 | 216 | 31 | 0.011 | ||
| ProSiteProfiles | 186 | 207 | 22 | 8.63 | ||
| Pfam | 218 | 280 | 63 | 3.1E-8 | ||
| ProSiteProfiles | 220 | 242 | 23 | 9.084 | ||
| SMART | 220 | 250 | 31 | 0.39 | ||
| SMART | 254 | 284 | 31 | 160.0 | ||
| Pfam | 334 | 450 | 117 | 2.3E-28 | ||
| TMHMM | 339 | 361 | 23 | - | – | |
| Phobius | 340 | 361 | 22 | - | – | |
| Phobius | 362 | 388 | 27 | - | – | |
| Phobius | 389 | 410 | 22 | - | – | |
| TMHMM | 392 | 414 | 23 | - | – | |
| Phobius | 411 | 430 | 20 | - | – | |
| TMHMM | 427 | 449 | 23 | - | – | |
| Phobius | 431 | 451 | 21 | - | – | |
| Phobius | 452 | 456 | 5 | - | – | |
| Phobius | 457 | 481 | 25 | - | – | |
| TMHMM | 459 | 481 | 23 | - | – | |
| Phobius | 482 | 521 | 40 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0696600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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