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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0698200 |
| Transcript ID | LotjaGi1g1v0698200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ras-related protein-like protein; TAIR: AT5G59840.1 Ras-related small GTP-binding family protein; Swiss-Prot: sp|O24466|RAE1A_ARATH Ras-related protein RABE1a; TrEMBL-Plants: tr|I3T956|I3T956_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0698200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:126620378..126624551) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTGCTCCACCTGCTAGAGCTCGTGCCGATTACGATTACCTGATAAAGCTTCTCCTCATCGGTGATAGCGGTACGTA TGATTCGATCCATTCTTCATGCTGTCTTCAACTATCGTGTTAATTTCTGATTCCTTTTTTACTTTTTTTTTTTAAATTTT ATGTTGAAATTTCTTCTGATCTTGGATATGAGAATGCCTAGATTCGTCGTTGATTATAGCTTTTGTGCCAGTATGCTTAG GTCATGGGGCTCTTGAAATTCAAATGAATTGCATTGCTTCCACAACTTTTAGTTTGTACTCAAACATGTACATTTTGATT GTATCTCTTGGGCAAGTGGTCACAGGGGTTTGTTGTGTTGACTCGAGGCGATTTACAATTGGCGGCGCTGATATTACCTC TAATTCTGTGTGATTGTCATGTTTACACTTTACTGAATTGGCAGCTATCTGTAGAGATGATTATAAATCTTAGAGAGAGA CATTTTAGTTTTTTATCTCTTTTAGTTTGTTTGTTTCTTTTGTATTTCACCCTCAGTAGTTTGCTTTATTGTTTTTTAAG GAATTTAGCGCCTGTTTGATATGAGAAAGTATTTTATGTTTCTTTTAATAGAAAAATAAAACATTGTTTTCTCTTTATTT GGTTACTGAAGCACACCTATATTATTGCTGAGTTGTGAACTCAATGTCTTGCAAATGAGTTTTTTCTTCTTCTTGTAATT AAAAGTGAAAAAAAAAGTTGCATGCTATCTCACCATGTAGTTCATGATGGCAGGTGTGGGTAAAAGTTGCCTATTACTGC GTTTCTCGGATGGGTCTTTTACAACTAGTTTTATCACAACTATTGGGTAGGTGTCCCTTGTTTAATCACATAGTTTTCTT TTTCTTTGTGTCTATCTGTTATGCTGAGATGGCTCTGATCTTACAACTTTTTCCAATCTTTCAGCATTGATTTCAAAATA AGGACCATAGAGCTTGATGGCAAGCGAATCAAATTGCAGATATGGGATACTGCTGGCCAAGAGCGGTTCCGAACTATTAC AACTGGTTAGTGTGTTAGATTTAAATACTTTTTAATCATAACTGAAGTCTGGAATGTTTTAGTGCATGCTGAGATGTGAT TTTTCATTGCAACTTCTGATCATGTCTTTCTATAGTTTATTTTTCATGATGTTAACATTAAAATATGGCTATTTTCCTAT TTATCTATCTACTTGTTCCTTCAAATTGGAGAAGAAATAATCTGAGTTGTAGTACTTTTTGTAGATTAAATGTCTAGTCA ACTTCTTAGTTGTTTTCTCTAGAGAAGGGGCTGGATTTGCTGCATATCTCTAGAGGGACAATATTATCTTTTGATGCGGA CAACTGTATGTTGAGCTTGTGCAGTTTTTAGAGTGCTAAAGCATTTTAGAGTCAGCTCTGGCCCAATAAGCATATGCGAC TATTTTCTATAAGGCACGTGTCTTTTTGGTTTAGTGTTTTGGGCTTGAACCATTAGGTCAAACATTTGACCCAACCTTGT GAGCCTAATCTTTCCCTCTGCTTTTCCTGCCCTGTTGTGTATGTCACTCTTTTTTGGTCAAGTCTCGTATGTGAAGACCC GGCTACCACCGCACCGATAGCGAACTCTGGCGGTTTTGTTGGTGGACATTTGGCCATCTCCAGCCTACAAAGGGGTCTGG CAGTTTAGGCGTTGGAAGTTTGGCTATCTTTCTTGACAACATCCAACATTTCTGCTGCTGCAGGACTAGACTCATTTCTG ATGCTTTCTCTCGTATCTCGACGTCTGAGCCAGCACCATGGTCGGGTTATTTTGGCGGTGGTCGTCCTCTCTACTAAGAG CCTCAGCCTCTCTGTCTCGTTGAACTGTTCCCGTCATCCTCTCCGGTTGTTTTGGTGGTGGCCGCTTGGTCATCTCATTT GATGTTAATCTCACACATACTTGAGCCATCTTACAAACTGCGTCGCTGTTTTGGAGTGACAAGGCTGCATTCTCTTTACC TTCAACTTGTCACGAGGCTAGCTTTGGTAACAGTTCTCCCCTCACAATATGGCGGTTTTGGCGGTGGGCGCTTGAGCATC AATCTCAACCTTGGTATTCCCAGTCTTCTTGTCCAGATCAAGAACTACACCAACTTTCAAGGCCAAGTAGCACCTTGAAC TACCCCACCGGATCATCCTCTTCCCCCTTCGAAAGGTTGCTTATCTGGGTGGTGTGATTCTCCTTACTGCGATCTCTGCA ACGATTTCCTCCCTCTCCTCCCTGCTTCAAGGGTTGTGGCTTTGTCCATCGTGACTTCATTGCACTATTTCAATGACCTC CCTTGCACCGCCTCTCTCCCTTCCCACCCCTACTACCATGGTTATTGGTCTTGGAGACTTCCCTTCTGTTTTTGATTTCT AGTTTCCCTCCCTTCTCCAAGATTTCTGATTCGACATTCAACCCATTATTTTCTCCATCTTCTCCTTCGTTCATTTCTTT ATTTCTACCAGATCGTTTCCCGGCCTAAAGAAAACTCCATGCTCTTGCTTGTGTTTTTGGTTTCTGAGTTATTTGAGAGT CTCAACATCCCTCCTTAATTCCCAGTTATAAATGATCACAAAAGATGATATTTCTCTCTAATTCTCTTATTTATATAACA TTCTCTCTCTCTCTCTCTCTCTGACTAACTCTCAAACTAACTAAAACTACATCAACTTCTAACTTTGGGTACCTATCATT AGCACTTGTTGGAATAGTATATTGTACAATGTTGCTTAATCTTTCAAATATAAATATTAATTAACTTCTGCTACCCTTTG AAAATGTAAATTGTTGTGCTTATGTCATAATTATTTTCCCTTCTTTTGCAGCTTATTACCGTGGAGCCATGGGTATCTTG CTTGTATATGACGTTACTGATGAGTCTTCTTTTAACAGTAATTCTTCTTCCTCCTTAAGCTTTTAGGTTATATGCCATGC CTCTTTTATTGCTTCCTCCCCATGGTGAACTACTGAATCTCCTCAAGTGTTTGTTACATTAAATCTTAATGCCTTATTAG TTAGTTGAACCCCCATTATGTTCAGTTAACTAATTTCTTCAGCAGTTTAACTGGACAGTTTGGGGTGCTTCCTATACTTG CAATGAGTTTTAAGTTCTTGTACATGACAATTAGACTCATTTCTTCTTGTGTCTAGACTCTAGATCCTGTGCTTGGAATT AGTTTTGATTTCTTGTATGTGGAAATTATTTATATATATCTCGTGTCCAGACATTAGGAATTGGATTCGTAACATAGAGC AGCATGCTTCTGACAATGTTAACAAGATACTGGTAGGAAACAAGGCTGACATGGATGAAAGCAAGCGGGTATGTCATCTT ACTCTAGCCATCTTTAGGTAGATTTGTACACATTGTGCATAAAATTGTTTTGAGAAAGTTAGCAACACACTCTTTTCAGT AGTCAGTACTCTTTTTGGTTGAAACTCATACAGATTCCACCAATTTGGGAGTAGACCATCAAATTGGGAGGAGTAGGACC CATGTGATTTAGTGTATCCCATGTGGATTTCAACCAATAAGAGTGTTAGATAGTATGGTTCTAGCATTCAATTGTTTCTA TGCTGAGCATGATGTTCATGACTATTCTCCGTAGGCTGTGCCAACTTCAAAAGGTCAAGCCCTTGCAGATGAGTACGGTA TCAAGTTTTTTGAAACTGTAAGTTGCTCTTGTTGGTCATTGTTCTTATTGAAATTGCATGCATAAGTTGCTAATCTGTCA GTACTGAGAGTATGCTTGTACAGAGTGCAAAAACAAATTTGAACGTGGAGGAGGTTTTCTTTTCAATAGCTCGGGACATC AAGCAAAGACTTGCAGATACTGACTCAAAAGCTGAGGTTTACTTCATTACTATTTATGATTGGTTGTCTTGTGACTTTTT TTTTTAAAAAAAATCTTTGAATGTTTGCCTTCTCTTTGATTAAATCCAAGACTTTATCATGGTTGTATCTGATTTCATTT TGAGACTATTGTTTGCTTGCGTTTGAAGCCTAGCTAAAAAGCCCTTACTGTATTGAACTTTCTCTCAAGTTCTCGACTAA ATTTGCATTTCATTCTTTGCAGCCCCAGACAATCAAGATTAATCAACCAGATCAGCCTGCGGCTGCCCAAAATTCTACTT GCTGTGGTTCTTGA
CDS sequence (LotjaGi1g1v0698200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGCTCCACCTGCTAGAGCTCGTGCCGATTACGATTACCTGATAAAGCTTCTCCTCATCGGTGATAGCGGTGTGGG TAAAAGTTGCCTATTACTGCGTTTCTCGGATGGGTCTTTTACAACTAGTTTTATCACAACTATTGGCATTGATTTCAAAA TAAGGACCATAGAGCTTGATGGCAAGCGAATCAAATTGCAGATATGGGATACTGCTGGCCAAGAGCGGTTCCGAACTATT ACAACTGCTTATTACCGTGGAGCCATGGGTATCTTGCTTGTATATGACGTTACTGATGAGTCTTCTTTTAACAACATTAG GAATTGGATTCGTAACATAGAGCAGCATGCTTCTGACAATGTTAACAAGATACTGGTAGGAAACAAGGCTGACATGGATG AAAGCAAGCGGGCTGTGCCAACTTCAAAAGGTCAAGCCCTTGCAGATGAGTACGGTATCAAGTTTTTTGAAACTAGTGCA AAAACAAATTTGAACGTGGAGGAGGTTTTCTTTTCAATAGCTCGGGACATCAAGCAAAGACTTGCAGATACTGACTCAAA AGCTGAGCCCCAGACAATCAAGATTAATCAACCAGATCAGCCTGCGGCTGCCCAAAATTCTACTTGCTGTGGTTCTTGA
Protein sequence (LotjaGi1g1v0698200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTI TTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSA KTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINQPDQPAAAQNSTCCGS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 1 | 181 | 181 | 0.0023 | – | |
| PANTHER | 6 | 206 | 201 | 6.8E-128 | – | |
| PANTHER | 6 | 206 | 201 | 6.8E-128 | – | |
| Gene3D | 9 | 210 | 202 | 1.3E-73 | – | |
| SUPERFAMILY | 11 | 189 | 179 | 3.77E-64 | ||
| ProSiteProfiles | 11 | 210 | 200 | 38.661 | – | |
| CDD | 13 | 180 | 168 | 1.40137E-121 | – | |
| TIGRFAM | 14 | 170 | 157 | 1.1E-31 | ||
| PRINTS | 16 | 37 | 22 | 7.3E-47 | – | |
| SMART | 16 | 180 | 165 | 6.2E-107 | – | |
| Pfam | 17 | 178 | 162 | 1.6E-66 | ||
| SMART | 17 | 180 | 164 | 1.5E-35 | – | |
| SMART | 18 | 180 | 163 | 4.6E-14 | – | |
| SMART | 21 | 210 | 190 | 3.3E-8 | – | |
| PRINTS | 39 | 55 | 17 | 7.3E-47 | – | |
| PRINTS | 57 | 79 | 23 | 7.3E-47 | – | |
| PRINTS | 119 | 132 | 14 | 7.3E-47 | – | |
| PRINTS | 155 | 177 | 23 | 7.3E-47 | – | |
| MobiDBLite | 182 | 212 | 31 | - | – | |
| MobiDBLite | 189 | 212 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi1g1v0698200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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