Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi1g1v0707300 |
Transcript ID | LotjaGi1g1v0707300.1 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Protein kinase family protein; TAIR: AT4G28540.1 casein kinase I-like 6; Swiss-Prot: sp|Q8LPJ1|CKL6_ARATH Casein kinase 1-like protein 6; TrEMBL-Plants: tr|A0A0B2PNU8|A0A0B2PNU8_GLYSO Casein kinase I isoform delta-like; Found in the gene: LotjaGi1g1v0707300 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:127558847..127567002) extracted from Lotus japonicus Gifu genome v1.2.
AAACACACCAACAAATACTATAATCTCTTGCCAGCTCCACCCTCCTCATCTCTCTCTCTCTCTCTCTCCAAAGTCGTAAA CTTTTGATTCTTGTTCCTACCTGGTTCAGCACATGCTCCTCAATCTCTTCTTCTTCTTGTTCTTTTTCCTTCTTTTTTTA TAATTATTTTATAGAAAGTTTCAATTTTTTGGTTTGTTGGTGATACCCATTTCCTTTTTGTTTTCTGGGGTCAATGCGGT CATGTTCTCACGAAATTAGGGCTTCAATTCTTCATCTGGGGTGATTGATTGGGGTCAATTGTTCCATGGGAATGTAGCTG TAGAAGGTGGTGTTGTATTTGAACAATAAAAATCCCACCTTTATTTCTGGGTATGTTACAAATTCTTTGGAGTTCTTTTT TATTTGCCCTTTTCCTGGATTTGCAACATATCACCGTTTCACAGCTAATTGGATGAGTAGGTTTGGAAATCTCATTGGAT TTGAGTGGATTTTTCAATAAAGGTTGGATTTTTGGCCTGCTTGAACCCCTTTTTGCACAATTAGGTGCTGAATTGGGAAC AAATCTGAGCAGAAAAAAGCTTGTTGAAGTTTCTGGGTATTGGGATTTTTAAGGTCATCTTATGATGGATCATGTGATTG CTGGGAAGTTTAAATTGGGAAGGAAAATTGGAAGTGGGTCTTTTGGGGAACTTTATATTGGTATGTACATGTTTCTTCCT CTTTTTTTTTTTTGCTTTTCCAAATTAATTTTTTGTAATATTTGTTTAGGGACATTATCTTATATTGTTATGTAGTTGTT AACATATTCCTTTTATCCTTTGTGTCAGCTGTTAATGTACAAACTGGAGAGGAGGTGGCTGTCAAGTTGGTATGTTAAGT TCTCTTTAAGTTTTCAACTCTTATTTATGTGTAGAAGAGGCAAAATGATTCATTATTGAATTAGTTTATGAATTTCTAGT GATCGATTATTGTGTTCCTGTTTCTGATTGCATTTTTAATATCTTTGATGTGCATATATGATGAAACCACTTTGATTTTC CCTGAGGAACATGTTTTTAGACTATAAATGTTTTGCGGCAATTGTAATGTTTTAGAATTTCATGCAGTAGACATTATCAC TTCAGAAGTTGAAGCGTTCTGTATTATTTTATCCATGTTATGACTATATTCTTTTGCTGTCCTCTTTCATACTAGTTAAT GAAATTAGTCTGCTCATGATATTCTGTGTTTTTAATTCTTAATCATTATGCCATGCCCCTGAAATTTTTCCAGGAACCTG TGAAGACCAAGCATCCACAGCTTCACTATGAGTCAAAATTGTATATGCTTCTTCAAGGAGGAAGTAAGCCTATATATCTT TTTAGTGTTTTCAATACTAAACATATTGGCTACTATCTATTGCTACAAATTGAAACTGCTTCTCCATCCTTTGTATGTGT ACGAGTCTATGCTTTGTTTTCTTGAGTCTGGAGGATAGCCTGATTAATGCATTTGGTTTGTGTAATCATAACCATTAGTC TTAAGCTGTGCCGCCCTTGAAGAAAATTTAAAACTGAAAAGTCTCAGAGAACAATTGAACATGCTTCCTTTTTGAGTAAT CCAACTTTGTTCCTTATTGAAGCTGGGATTCCCCATCTCAAGTGGTTTGGAGTTGAGGGAGACTACAATATCATGGCAAT TGACCTTCTTGGACCAAGTCTAGAAGATTTGTTCAATTATTGCAACCGGAAGTTAACATTGAAGTCAGTCTTGATGCTTG CTGATCAATTAGTAAGTGAACATGGCAACTAATATCAAATAAAGTACATTTTTGTGATACTGATGTTTGACTTGCTTATT GTTCAGATTAACAGAGTTGAATATATGCATTCAAGAGGTTTCCTTCACCGTGACATAAAGCCAGACAATTTTTTAATGGG CCTAGGACGTAAAGCAAACCAGGTATATTGAAAATGTTATCTTTCCATTTTTCCTGTTTCTTCTTTTTTTGGCCTTTTAT TTTTATTACTCATTTATGGAAGTTTGTGGTTGTTAATTCATTGTTTTTTCACCTGAATGTAAATGAATCACGCACTTCAG TTAGCTCATGTCAAAAAAAGCATTTAGCAATTCAAATTTCAAATAGCGCAATACCACTAAAGTACGTATCTCCAATAGAA TGGAATTCTTCTTGAAAGTGTCAAGAGATGTCACAAAAATGATAATAATACTAATTTGTTTACGAAACAATAACAGAAAA TAAAATGTGTATCTTAGCTAAGATGGGCGAAGAACCAAATAAAAATGCTGTAGTCAATTGAAAAACTGTGACGAACCACC TGATAGGTTATTATATGTTGTACTGTTTGATACTCAATGGGCTTAGGCCTAATAATGATAAGTGAATGTTCAAGAGTCAT TTATCTACAACAAAACCCATGAGGTGGTACCTCAGACCTCTTCCTGCCCCAGCTCTTGGCATTCCATGACTACTTTTCCA ACTTGAAACTCACAGGGGGTTTATACAAAAGTGATTAGGCTGCATTTTAAGTAAACACACTTCCTATGGCTCTTTATCTT GTCTGCTGGATGGATGTTCTAGTAGCATTTCTTGTTTCCCAATCTTTTTCTTCTATTCTATTGTGATGGATTCCTCTTCT TTGCTGCCACTAAAATAAATTATTTATAGATTCTGATGAGAAATATTCCAGTTGAACATGCAAAATCCAGTTCTTTTAAA TATATTTAAATTGTGTTGGGTACCTCATTTCAGGTCTACGCCATTGACTTTGGCCTTGCAAAAAAGTATAGGGATCTTCA GACTCATAGGCACATCCCATACAGGTAAAATTTTCACCATTATTTCAGGATTTTAAGATGTGGTAAGGTTGCGTTTGAAA GAGCTTAACTTGGCTTATCTTATAGCATAAGCGCTTATGCAAGTGTATGGGTATGCTTATGACCTACCTATAAAGTGATT TGAGCTGATTTTCATAAGCTTCTCATATTGGCTTATGAATAAGCACATCTACCTACTTATAAGCTATTTCGAGCTTATTT CAGTAAGCTTCTTAAATTAGCTTAATGTATAAGTGCTTATATATCATAGTAGTCAATCCCGGATAGCGGCGCGGAGCGGC CGACCCCAAAAGTGGGATAGCGGGATAGTGCATAGCGGGATGGCCGCTATTTTGATTTTTCATATATAATTAATAGTAGA AAATTAAAGAGGAAAAGAAAGGAAATAAAAATAGAGGAATAGAAAAAAAAAACAGAGCAGAACAGAGGCTCAAGGGAAAC AGGGGCACTGGTCGCCGGAGATAGGCTGAAAGTCACCGCACAGAGTTCGCCGGAAGTTGGACGGTGCTTGTCGGAGGTCG AGAGGTGGCCATGGTTGCTGATTGAAGGTGGCTGAAGGAGATCGCACAGTGGCCATGGGTTCTGGTCGCAGAAGAAGATG AATAGTGAGAGAGATGAAACGTGCGTTTCATTTATTTATGACAAAATCCCAAAAATGCCCTCAAAGTGCAACCTAATTAT AAAATTTCAAGGGCAATTTAGGTTTTTCCACACCTTCACCTTATCTTCTTCTTGTGGCGCCGCGATCTGGTGCGACAAGG CCGCGATTTGCGGCGGCGTTCCGCGACGCGACGGCTTCAGAATCGCGGCGAGCGACCGCGCGATAGCGCCGCGACCGATA ACTATGTTATATATATGGTCACTTAATTAAGCTGTTTGCCCAAACACACCGTAAATAACACTTCGGCAAACCCAACCTTT GGTTGCCTTATTATTTTCATGTCTTCCTTGGATTTAAGTATTTTCATCACTTTAATAGGTTGGGCCATTTTTCAAGTGGA TATAATATTAGTATTAGTATCATTTACTATGATAATAATAATAACAACCACAACTACTATACTACTTCTATAGTTCTATT ACTACTTCAATAATAAAACTAATAATTATAATTTATATAACTGTGATTTATCGTAAGTGTGGTTGTGCCCAATCATGCTT GTTTAGCACAAATGTGAACTGATATTTAATACAATCTGTGAACCATAATTTCCGTAATGCAGCAAAAATGGTCAAGGACC TGTAATCTATATTTTGGTTTCTGGTTGCTTCTTGTCTGTTTTCTCATTCTGATGTCAAATACTCTTTAAAAATGTCCTTT CATTTTAAACCGATTATAGTTCTACCCCTTAGCTTTTGTAAATTATATTTCTTTTGTTATGAAAAGCTTGCTTCCTTTCT TGCATAGGGAAAACAAGAACCTTACTGGCACAGCTCGTTATGCAAGTGTCAATACTCATCTTGGAATTGGTGGGTATTAT GGTGTGGTAGTTCATTCCTTTTTGTGTAGACAACTAATAATTATAAAACTTTTGTTTTTTAATTTAACTTTATTGTGCTG GCAGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGTTATGTGCTCATGTACTTCTTAAGAGGAAGGTTAGATACTTG TTAGACACATCTTATTTACCCCCTCCTAGATTTGGATATTTTTATGATAATATTCTTACTATCTCCTTTCACTGTACTGT TTTTGTTTTCAGTCTTCCTTGGCAGGGACTGAAAGCTGGAACCAAAAAACAAAAATATGATAAAATCAGTGAGAAGAAGA TGTCAACTCCCATAGAGGTATTATGACTAGCTAAGATGATGAGGTTTTGGAGCAACAAAATATTCCCTCTGGATCTAGAG TTTGATGCTTTGCATTTGCTTGGATTTTAATTGGCATGATCTGTATTTTGTCATGAATTTATGATACCCTAGAGGTTTAG AAGACATAGACAGGCCTGTCCTGAGAGCTGGTCCTAAATAGTTTGTAGTACTCTACATGTGAATACTTGAACAAGCCAAA TTGCATGTTTCTGTTGTTTGTTAGAACTAGATTTACTAATTACTAATATTGGGTGCTACGAAAAGCTAAATGCTGAGGTT GATTTATTCTTTGCATTCCACAGTTGGCATAACTTCGTACATTTTGCCATTCTTTCCTTTTTCTGTTTCAGTTCTCAAGT TCCTTGGTCCTGTTGCTTTTTTGTTAATTTTGTGCTTGTATAACAGGTGCTCTGCAAATCATATCCTTCAGAGTTTGTAT CATATTTCCACTACTGCCGATCATTGCGGTTTGAGGACAAGCCTGACTATTCATATTTAAAGAGGCTTTTTCGAGATTTA TTTATTCGAGAAGGTCTGCTACACAAGATATCTAATTTTTGCAGTAGCATTACATACATTTTTTTAGAAACCTAACGTGT TAAATAATATGACAAAATGCTGCAGGTTATCAATTTGACTATGTTTTTGACTGGACTGTTTTGAAGTATCCGCAGATTGG TGGCAGCTCCAGAGGACGGGTTAGTACTTTCATTTTCATATCTTGTTTGGGTTTTGCATACTAGTTGGAGAAATGATATC AACGCACTCTTTTAAACATTCACTTCAACACATCCCATGTGATGGTTTATCTTTTAATAGGTCAACATATTTGCCTCACT TTTTAATTATTTTTGAAAATTTAAATAATAAACCAATCACATAGAGTGTTTTGGAGAGTATGTTGCTAACATTCCTCTTC GAGTAGAGGTCACTTACGGTATTTGTTCTAATAACAGCATGACAGTGGCAAGGCAGCTATGCATGCAGGACCATCTGTAC AAAAGCCAGAAAAGATTTCAGGTTCGCTCTCTTTTGGTCAAATAAAATGATAAAATTTGTTATCCTACTAGTGATTTTCA TTGCTGACATCAATAGTGATCAAAATGCGGTGCTTTTCCGAGCTTTGTTTTCATGTAATCATCAGTTGTTCAATTGCTTC TTTCAGTTGGGAAAGAGATTCGAGAGAAGCTATCTGGTGCTGTTGAAGCATTCTCGCGGAGGAACCCAACAAGTTCTAGT CCTCGTCGTGATCATTCCAAGCATAGGAGTTTTGAGGATGTAGCTGTACACAAGGATCCGGTAAAAGAATTTTTCTAACA ATATAAATCTATGAATATTGAATAATCACTTATAAGATAAAGTTTTCCCATAAGAAGAGTATTGTTTATCTAAATATTTT GTTGTGAAGATTCTGCATACTATAAACTGTCTGAAAGAAATCCTTGGTTAAAGGTGCCTGTTAGAAAATGAATCAGTTTA CATTTTTCTGTAATGCATGAATTTGAGCTAAACATTTTAGGTAACAACTTCGGTTAAGGGAATGAGTTTTATTTTAATTA TATTTATTTTTGTTAATTTATACATATACTTTCAATACCCATGTTTGCCGCCGAATGTTGATTTGAAACTCTGGCTTGAT TTTCCTTGTCTGTTAGTCACTTCAATGAGATTTAAGTGTGTGATTGGGTCTCTTTTTCTTTTGTAAACAATTGCAGGTAG ATTCCCCACACTAAGTCCTAACAAAACAATAATCAAAATGAAAAATTGAAAGGTGTAAAAATCACAACAGCAACAAATCA ATATTTTAAGCATGAATAAGAGAAGTAAAGGGGGTAGGAGGGATTGTTGAAGTTTTTTAAATGATGATATTGCTGTTCGT CCTGATGATTGATGATTTTGTTACTATTTTATTTGTATGGTTTGATTCTAAAACTAAGTGCATGTTTTGAAATCCTTCTA CAATTCTAGAGCAAAAATCAATTCTGAGAATAAGCTTATGTGAGTAGCTTTTGGATGATATATTTGATTTTGATGAAAGA AAATTTGATCCAATAAATGTCAGTCTCTATCATTTGCTTTTACACCCTTTCTTTACCTTTCTCTTTTCCTGTTTTCCTCA TGGCTGAAACCTATGAATATTTGTTCATATTCTCTACTGAATGATTCTTACGTTTAGTTTTACCTTGTCTATTCAGTATC ATGATCAAGAGAAGGGACGCAGTTCCTCTCGATATGGCAGCAGCTCAAGAAGACCCGTAATCTCATCATCAACCAGGCCA AGTTCCTCAGCCGATCATACTGACAGTCGTACTGGCCGACTAACCTCAAGCGGTAGCCGCCCATCCGCAACACATAGAAA TCAACCCTCGTATGAGGCCAAACAGCCAACTTTCGTGCGCTCTGGATCCACGCGAGGCAATCGTGATGATCCTCTGAGGA GTTTTGAGCTCCTCTCTATCAGGAAGTAATAACAAGTGTATCCAGTTTCATTCTTCAGAAGACATTTTCCAAATTCTAAC GTGCATGTCACTGTTTACGCAAAAACGATCTCAAGCACTGTGGAGTCATGTTCCATGTATATTACTGAATTAACAAGCAT TGTGGAGTCATGTTCCATGATCAACTTCACTTCCTGACAACTGGACCAAGGTGGACTTTTTTCTACCCCCCAGAGTCTTG TGAAGGTGATATCTCAGCTGCTGTAACATGTTCCTAAAACATGCTCCAGAGAACTCAATCAGGGTTCTTTTTTCTGGTTA ATTTTTTTTACTAGATAAATGTGTTTACCTTTTTCCTGAAAAAAATATTAGATGAAACCAAGAGTTGTAGTTTATGATAC AATTGTTATTGTTTGTTCACGATTTACCTATGTGTTGAAAATGGAATTATTGAGAAGTTAGAATTCTGCTTGAGACCTTC CATTATCCATTTCTTTTCCAATCCATGCTCACATGTTGGATATTGGCAAACTGAGAACCATGTATAACTTGCTATAGGGG GTTTATGTTTTGGAAATTTGATGTGTTGGCAGGTATAATTAAAACACTTTAAAATAAAATTTTAACCTAAAACTAGTTAA TTAATTTTTTTAGTGCATAGTTCATTATAAAACTTTATTTTGGTGCATAGTTCATTAAAAAACTTTTTTTTTGGGGTGCA TAGTTCATTAAAAAAAGTAATATAAAATAAGTTATATTAGCATTTGAATTAAAGTTCCACATGTGTTATTTCTCTACTTT GGCTGATTTTTCTTTGAAAATTTAGTTGAGAATGATTGTAGGATTGGTTCAACTACGAATTGAGCTACCATACCAAATCA CACCTTAGGTTCACTTTTTTGTTTAGAGTACATGTAGTGAAATAATCACGTTCAAGTCAGATAGACTCATTTTAAGCGGT AAAGCATCGTAGATTCCCTTCATGATTTAAGTATTTTAAACCAAAGTTAAATCTAGAGGTAACTGGTGAGTAAAAG
CDS sequence (LotjaGi1g1v0707300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGGATCATGTGATTGCTGGGAAGTTTAAATTGGGAAGGAAAATTGGAAGTGGGTCTTTTGGGGAACTTTATATTGC TGTTAATGTACAAACTGGAGAGGAGGTGGCTGTCAAGTTGGAACCTGTGAAGACCAAGCATCCACAGCTTCACTATGAGT CAAAATTGTATATGCTTCTTCAAGGAGGAACTGGGATTCCCCATCTCAAGTGGTTTGGAGTTGAGGGAGACTACAATATC ATGGCAATTGACCTTCTTGGACCAAGTCTAGAAGATTTGTTCAATTATTGCAACCGGAAGTTAACATTGAAGTCAGTCTT GATGCTTGCTGATCAATTAATTAACAGAGTTGAATATATGCATTCAAGAGGTTTCCTTCACCGTGACATAAAGCCAGACA ATTTTTTAATGGGCCTAGGACGTAAAGCAAACCAGGTCTACGCCATTGACTTTGGCCTTGCAAAAAAGTATAGGGATCTT CAGACTCATAGGCACATCCCATACAGGGAAAACAAGAACCTTACTGGCACAGCTCGTTATGCAAGTGTCAATACTCATCT TGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGTTATGTGCTCATGTACTTCTTAAGAGGAAGTCTTCCTT GGCAGGGACTGAAAGCTGGAACCAAAAAACAAAAATATGATAAAATCAGTGAGAAGAAGATGTCAACTCCCATAGAGGTG CTCTGCAAATCATATCCTTCAGAGTTTGTATCATATTTCCACTACTGCCGATCATTGCGGTTTGAGGACAAGCCTGACTA TTCATATTTAAAGAGGCTTTTTCGAGATTTATTTATTCGAGAAGGTTATCAATTTGACTATGTTTTTGACTGGACTGTTT TGAAGTATCCGCAGATTGGTGGCAGCTCCAGAGGACGGCATGACAGTGGCAAGGCAGCTATGCATGCAGGACCATCTGTA CAAAAGCCAGAAAAGATTTCAGTTGGGAAAGAGATTCGAGAGAAGCTATCTGGTGCTGTTGAAGCATTCTCGCGGAGGAA CCCAACAAGTTCTAGTCCTCGTCGTGATCATTCCAAGCATAGGAGTTTTGAGGATGTAGCTGTACACAAGGATCCGTATC ATGATCAAGAGAAGGGACGCAGTTCCTCTCGATATGGCAGCAGCTCAAGAAGACCCGTAATCTCATCATCAACCAGGCCA AGTTCCTCAGCCGATCATACTGACAGTCGTACTGGCCGACTAACCTCAAGCGGTAGCCGCCCATCCGCAACACATAGAAA TCAACCCTCGTATGAGGCCAAACAGCCAACTTTCGTGCGCTCTGGATCCACGCGAGGCAATCGTGATGATCCTCTGAGGA GTTTTGAGCTCCTCTCTATCAGGAAGTAA
Protein sequence (LotjaGi1g1v0707300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMDHVIAGKFKLGRKIGSGSFGELYIAVNVQTGEEVAVKLEPVKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNI MAIDLLGPSLEDLFNYCNRKLTLKSVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYAIDFGLAKKYRDL QTHRHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMSTPIEV LCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTVLKYPQIGGSSRGRHDSGKAAMHAGPSV QKPEKISVGKEIREKLSGAVEAFSRRNPTSSSPRRDHSKHRSFEDVAVHKDPYHDQEKGRSSSRYGSSSRRPVISSSTRP SSSADHTDSRTGRLTSSGSRPSATHRNQPSYEAKQPTFVRSGSTRGNRDDPLRSFELLSIRK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Gene3D | 1 | 336 | 336 | 3.2E-109 | – | |
PANTHER | 3 | 450 | 448 | 2.3E-265 | – | |
PANTHER | 3 | 450 | 448 | 2.3E-265 | – | |
SUPERFAMILY | 5 | 291 | 287 | 3.91E-83 | ||
CDD | 9 | 283 | 275 | 0.0 | – | |
ProSiteProfiles | 10 | 279 | 270 | 29.488 | ||
SMART | 10 | 288 | 279 | 4.9E-12 | ||
Pfam | 11 | 228 | 218 | 1.0E-24 | ||
ProSitePatterns | 16 | 39 | 24 | - | ||
ProSitePatterns | 125 | 137 | 13 | - | ||
MobiDBLite | 302 | 462 | 161 | - | – | |
MobiDBLite | 326 | 340 | 15 | - | – | |
MobiDBLite | 350 | 381 | 32 | - | – | |
MobiDBLite | 382 | 444 | 63 | - | – | |
MobiDBLite | 446 | 462 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0707300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…