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LotjaGi1g1v0707300.1

Overview

Field Value
Gene ID LotjaGi1g1v0707300
Transcript ID LotjaGi1g1v0707300.1
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Protein kinase family protein; TAIR: AT4G28540.1 casein kinase I-like 6; Swiss-Prot: sp|Q8LPJ1|CKL6_ARATH Casein kinase 1-like protein 6; TrEMBL-Plants: tr|A0A0B2PNU8|A0A0B2PNU8_GLYSO Casein kinase I isoform delta-like; Found in the gene: LotjaGi1g1v0707300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:127558847..127567002) extracted from Lotus japonicus Gifu genome v1.2.

AAACACACCAACAAATACTATAATCTCTTGCCAGCTCCACCCTCCTCATCTCTCTCTCTCTCTCTCTCCAAAGTCGTAAA CTTTTGATTCTTGTTCCTACCTGGTTCAGCACATGCTCCTCAATCTCTTCTTCTTCTTGTTCTTTTTCCTTCTTTTTTTA TAATTATTTTATAGAAAGTTTCAATTTTTTGGTTTGTTGGTGATACCCATTTCCTTTTTGTTTTCTGGGGTCAATGCGGT CATGTTCTCACGAAATTAGGGCTTCAATTCTTCATCTGGGGTGATTGATTGGGGTCAATTGTTCCATGGGAATGTAGCTG TAGAAGGTGGTGTTGTATTTGAACAATAAAAATCCCACCTTTATTTCTGGGTATGTTACAAATTCTTTGGAGTTCTTTTT TATTTGCCCTTTTCCTGGATTTGCAACATATCACCGTTTCACAGCTAATTGGATGAGTAGGTTTGGAAATCTCATTGGAT TTGAGTGGATTTTTCAATAAAGGTTGGATTTTTGGCCTGCTTGAACCCCTTTTTGCACAATTAGGTGCTGAATTGGGAAC AAATCTGAGCAGAAAAAAGCTTGTTGAAGTTTCTGGGTATTGGGATTTTTAAGGTCATCTTATGATGGATCATGTGATTG CTGGGAAGTTTAAATTGGGAAGGAAAATTGGAAGTGGGTCTTTTGGGGAACTTTATATTGGTATGTACATGTTTCTTCCT CTTTTTTTTTTTTGCTTTTCCAAATTAATTTTTTGTAATATTTGTTTAGGGACATTATCTTATATTGTTATGTAGTTGTT AACATATTCCTTTTATCCTTTGTGTCAGCTGTTAATGTACAAACTGGAGAGGAGGTGGCTGTCAAGTTGGTATGTTAAGT TCTCTTTAAGTTTTCAACTCTTATTTATGTGTAGAAGAGGCAAAATGATTCATTATTGAATTAGTTTATGAATTTCTAGT GATCGATTATTGTGTTCCTGTTTCTGATTGCATTTTTAATATCTTTGATGTGCATATATGATGAAACCACTTTGATTTTC CCTGAGGAACATGTTTTTAGACTATAAATGTTTTGCGGCAATTGTAATGTTTTAGAATTTCATGCAGTAGACATTATCAC TTCAGAAGTTGAAGCGTTCTGTATTATTTTATCCATGTTATGACTATATTCTTTTGCTGTCCTCTTTCATACTAGTTAAT GAAATTAGTCTGCTCATGATATTCTGTGTTTTTAATTCTTAATCATTATGCCATGCCCCTGAAATTTTTCCAGGAACCTG TGAAGACCAAGCATCCACAGCTTCACTATGAGTCAAAATTGTATATGCTTCTTCAAGGAGGAAGTAAGCCTATATATCTT TTTAGTGTTTTCAATACTAAACATATTGGCTACTATCTATTGCTACAAATTGAAACTGCTTCTCCATCCTTTGTATGTGT ACGAGTCTATGCTTTGTTTTCTTGAGTCTGGAGGATAGCCTGATTAATGCATTTGGTTTGTGTAATCATAACCATTAGTC TTAAGCTGTGCCGCCCTTGAAGAAAATTTAAAACTGAAAAGTCTCAGAGAACAATTGAACATGCTTCCTTTTTGAGTAAT CCAACTTTGTTCCTTATTGAAGCTGGGATTCCCCATCTCAAGTGGTTTGGAGTTGAGGGAGACTACAATATCATGGCAAT TGACCTTCTTGGACCAAGTCTAGAAGATTTGTTCAATTATTGCAACCGGAAGTTAACATTGAAGTCAGTCTTGATGCTTG CTGATCAATTAGTAAGTGAACATGGCAACTAATATCAAATAAAGTACATTTTTGTGATACTGATGTTTGACTTGCTTATT GTTCAGATTAACAGAGTTGAATATATGCATTCAAGAGGTTTCCTTCACCGTGACATAAAGCCAGACAATTTTTTAATGGG CCTAGGACGTAAAGCAAACCAGGTATATTGAAAATGTTATCTTTCCATTTTTCCTGTTTCTTCTTTTTTTGGCCTTTTAT TTTTATTACTCATTTATGGAAGTTTGTGGTTGTTAATTCATTGTTTTTTCACCTGAATGTAAATGAATCACGCACTTCAG TTAGCTCATGTCAAAAAAAGCATTTAGCAATTCAAATTTCAAATAGCGCAATACCACTAAAGTACGTATCTCCAATAGAA TGGAATTCTTCTTGAAAGTGTCAAGAGATGTCACAAAAATGATAATAATACTAATTTGTTTACGAAACAATAACAGAAAA TAAAATGTGTATCTTAGCTAAGATGGGCGAAGAACCAAATAAAAATGCTGTAGTCAATTGAAAAACTGTGACGAACCACC TGATAGGTTATTATATGTTGTACTGTTTGATACTCAATGGGCTTAGGCCTAATAATGATAAGTGAATGTTCAAGAGTCAT TTATCTACAACAAAACCCATGAGGTGGTACCTCAGACCTCTTCCTGCCCCAGCTCTTGGCATTCCATGACTACTTTTCCA ACTTGAAACTCACAGGGGGTTTATACAAAAGTGATTAGGCTGCATTTTAAGTAAACACACTTCCTATGGCTCTTTATCTT GTCTGCTGGATGGATGTTCTAGTAGCATTTCTTGTTTCCCAATCTTTTTCTTCTATTCTATTGTGATGGATTCCTCTTCT TTGCTGCCACTAAAATAAATTATTTATAGATTCTGATGAGAAATATTCCAGTTGAACATGCAAAATCCAGTTCTTTTAAA TATATTTAAATTGTGTTGGGTACCTCATTTCAGGTCTACGCCATTGACTTTGGCCTTGCAAAAAAGTATAGGGATCTTCA GACTCATAGGCACATCCCATACAGGTAAAATTTTCACCATTATTTCAGGATTTTAAGATGTGGTAAGGTTGCGTTTGAAA GAGCTTAACTTGGCTTATCTTATAGCATAAGCGCTTATGCAAGTGTATGGGTATGCTTATGACCTACCTATAAAGTGATT TGAGCTGATTTTCATAAGCTTCTCATATTGGCTTATGAATAAGCACATCTACCTACTTATAAGCTATTTCGAGCTTATTT CAGTAAGCTTCTTAAATTAGCTTAATGTATAAGTGCTTATATATCATAGTAGTCAATCCCGGATAGCGGCGCGGAGCGGC CGACCCCAAAAGTGGGATAGCGGGATAGTGCATAGCGGGATGGCCGCTATTTTGATTTTTCATATATAATTAATAGTAGA AAATTAAAGAGGAAAAGAAAGGAAATAAAAATAGAGGAATAGAAAAAAAAAACAGAGCAGAACAGAGGCTCAAGGGAAAC AGGGGCACTGGTCGCCGGAGATAGGCTGAAAGTCACCGCACAGAGTTCGCCGGAAGTTGGACGGTGCTTGTCGGAGGTCG AGAGGTGGCCATGGTTGCTGATTGAAGGTGGCTGAAGGAGATCGCACAGTGGCCATGGGTTCTGGTCGCAGAAGAAGATG AATAGTGAGAGAGATGAAACGTGCGTTTCATTTATTTATGACAAAATCCCAAAAATGCCCTCAAAGTGCAACCTAATTAT AAAATTTCAAGGGCAATTTAGGTTTTTCCACACCTTCACCTTATCTTCTTCTTGTGGCGCCGCGATCTGGTGCGACAAGG CCGCGATTTGCGGCGGCGTTCCGCGACGCGACGGCTTCAGAATCGCGGCGAGCGACCGCGCGATAGCGCCGCGACCGATA ACTATGTTATATATATGGTCACTTAATTAAGCTGTTTGCCCAAACACACCGTAAATAACACTTCGGCAAACCCAACCTTT GGTTGCCTTATTATTTTCATGTCTTCCTTGGATTTAAGTATTTTCATCACTTTAATAGGTTGGGCCATTTTTCAAGTGGA TATAATATTAGTATTAGTATCATTTACTATGATAATAATAATAACAACCACAACTACTATACTACTTCTATAGTTCTATT ACTACTTCAATAATAAAACTAATAATTATAATTTATATAACTGTGATTTATCGTAAGTGTGGTTGTGCCCAATCATGCTT GTTTAGCACAAATGTGAACTGATATTTAATACAATCTGTGAACCATAATTTCCGTAATGCAGCAAAAATGGTCAAGGACC TGTAATCTATATTTTGGTTTCTGGTTGCTTCTTGTCTGTTTTCTCATTCTGATGTCAAATACTCTTTAAAAATGTCCTTT CATTTTAAACCGATTATAGTTCTACCCCTTAGCTTTTGTAAATTATATTTCTTTTGTTATGAAAAGCTTGCTTCCTTTCT TGCATAGGGAAAACAAGAACCTTACTGGCACAGCTCGTTATGCAAGTGTCAATACTCATCTTGGAATTGGTGGGTATTAT GGTGTGGTAGTTCATTCCTTTTTGTGTAGACAACTAATAATTATAAAACTTTTGTTTTTTAATTTAACTTTATTGTGCTG GCAGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGTTATGTGCTCATGTACTTCTTAAGAGGAAGGTTAGATACTTG TTAGACACATCTTATTTACCCCCTCCTAGATTTGGATATTTTTATGATAATATTCTTACTATCTCCTTTCACTGTACTGT TTTTGTTTTCAGTCTTCCTTGGCAGGGACTGAAAGCTGGAACCAAAAAACAAAAATATGATAAAATCAGTGAGAAGAAGA TGTCAACTCCCATAGAGGTATTATGACTAGCTAAGATGATGAGGTTTTGGAGCAACAAAATATTCCCTCTGGATCTAGAG TTTGATGCTTTGCATTTGCTTGGATTTTAATTGGCATGATCTGTATTTTGTCATGAATTTATGATACCCTAGAGGTTTAG AAGACATAGACAGGCCTGTCCTGAGAGCTGGTCCTAAATAGTTTGTAGTACTCTACATGTGAATACTTGAACAAGCCAAA TTGCATGTTTCTGTTGTTTGTTAGAACTAGATTTACTAATTACTAATATTGGGTGCTACGAAAAGCTAAATGCTGAGGTT GATTTATTCTTTGCATTCCACAGTTGGCATAACTTCGTACATTTTGCCATTCTTTCCTTTTTCTGTTTCAGTTCTCAAGT TCCTTGGTCCTGTTGCTTTTTTGTTAATTTTGTGCTTGTATAACAGGTGCTCTGCAAATCATATCCTTCAGAGTTTGTAT CATATTTCCACTACTGCCGATCATTGCGGTTTGAGGACAAGCCTGACTATTCATATTTAAAGAGGCTTTTTCGAGATTTA TTTATTCGAGAAGGTCTGCTACACAAGATATCTAATTTTTGCAGTAGCATTACATACATTTTTTTAGAAACCTAACGTGT TAAATAATATGACAAAATGCTGCAGGTTATCAATTTGACTATGTTTTTGACTGGACTGTTTTGAAGTATCCGCAGATTGG TGGCAGCTCCAGAGGACGGGTTAGTACTTTCATTTTCATATCTTGTTTGGGTTTTGCATACTAGTTGGAGAAATGATATC AACGCACTCTTTTAAACATTCACTTCAACACATCCCATGTGATGGTTTATCTTTTAATAGGTCAACATATTTGCCTCACT TTTTAATTATTTTTGAAAATTTAAATAATAAACCAATCACATAGAGTGTTTTGGAGAGTATGTTGCTAACATTCCTCTTC GAGTAGAGGTCACTTACGGTATTTGTTCTAATAACAGCATGACAGTGGCAAGGCAGCTATGCATGCAGGACCATCTGTAC AAAAGCCAGAAAAGATTTCAGGTTCGCTCTCTTTTGGTCAAATAAAATGATAAAATTTGTTATCCTACTAGTGATTTTCA TTGCTGACATCAATAGTGATCAAAATGCGGTGCTTTTCCGAGCTTTGTTTTCATGTAATCATCAGTTGTTCAATTGCTTC TTTCAGTTGGGAAAGAGATTCGAGAGAAGCTATCTGGTGCTGTTGAAGCATTCTCGCGGAGGAACCCAACAAGTTCTAGT CCTCGTCGTGATCATTCCAAGCATAGGAGTTTTGAGGATGTAGCTGTACACAAGGATCCGGTAAAAGAATTTTTCTAACA ATATAAATCTATGAATATTGAATAATCACTTATAAGATAAAGTTTTCCCATAAGAAGAGTATTGTTTATCTAAATATTTT GTTGTGAAGATTCTGCATACTATAAACTGTCTGAAAGAAATCCTTGGTTAAAGGTGCCTGTTAGAAAATGAATCAGTTTA CATTTTTCTGTAATGCATGAATTTGAGCTAAACATTTTAGGTAACAACTTCGGTTAAGGGAATGAGTTTTATTTTAATTA TATTTATTTTTGTTAATTTATACATATACTTTCAATACCCATGTTTGCCGCCGAATGTTGATTTGAAACTCTGGCTTGAT TTTCCTTGTCTGTTAGTCACTTCAATGAGATTTAAGTGTGTGATTGGGTCTCTTTTTCTTTTGTAAACAATTGCAGGTAG ATTCCCCACACTAAGTCCTAACAAAACAATAATCAAAATGAAAAATTGAAAGGTGTAAAAATCACAACAGCAACAAATCA ATATTTTAAGCATGAATAAGAGAAGTAAAGGGGGTAGGAGGGATTGTTGAAGTTTTTTAAATGATGATATTGCTGTTCGT CCTGATGATTGATGATTTTGTTACTATTTTATTTGTATGGTTTGATTCTAAAACTAAGTGCATGTTTTGAAATCCTTCTA CAATTCTAGAGCAAAAATCAATTCTGAGAATAAGCTTATGTGAGTAGCTTTTGGATGATATATTTGATTTTGATGAAAGA AAATTTGATCCAATAAATGTCAGTCTCTATCATTTGCTTTTACACCCTTTCTTTACCTTTCTCTTTTCCTGTTTTCCTCA TGGCTGAAACCTATGAATATTTGTTCATATTCTCTACTGAATGATTCTTACGTTTAGTTTTACCTTGTCTATTCAGTATC ATGATCAAGAGAAGGGACGCAGTTCCTCTCGATATGGCAGCAGCTCAAGAAGACCCGTAATCTCATCATCAACCAGGCCA AGTTCCTCAGCCGATCATACTGACAGTCGTACTGGCCGACTAACCTCAAGCGGTAGCCGCCCATCCGCAACACATAGAAA TCAACCCTCGTATGAGGCCAAACAGCCAACTTTCGTGCGCTCTGGATCCACGCGAGGCAATCGTGATGATCCTCTGAGGA GTTTTGAGCTCCTCTCTATCAGGAAGTAATAACAAGTGTATCCAGTTTCATTCTTCAGAAGACATTTTCCAAATTCTAAC GTGCATGTCACTGTTTACGCAAAAACGATCTCAAGCACTGTGGAGTCATGTTCCATGTATATTACTGAATTAACAAGCAT TGTGGAGTCATGTTCCATGATCAACTTCACTTCCTGACAACTGGACCAAGGTGGACTTTTTTCTACCCCCCAGAGTCTTG TGAAGGTGATATCTCAGCTGCTGTAACATGTTCCTAAAACATGCTCCAGAGAACTCAATCAGGGTTCTTTTTTCTGGTTA ATTTTTTTTACTAGATAAATGTGTTTACCTTTTTCCTGAAAAAAATATTAGATGAAACCAAGAGTTGTAGTTTATGATAC AATTGTTATTGTTTGTTCACGATTTACCTATGTGTTGAAAATGGAATTATTGAGAAGTTAGAATTCTGCTTGAGACCTTC CATTATCCATTTCTTTTCCAATCCATGCTCACATGTTGGATATTGGCAAACTGAGAACCATGTATAACTTGCTATAGGGG GTTTATGTTTTGGAAATTTGATGTGTTGGCAGGTATAATTAAAACACTTTAAAATAAAATTTTAACCTAAAACTAGTTAA TTAATTTTTTTAGTGCATAGTTCATTATAAAACTTTATTTTGGTGCATAGTTCATTAAAAAACTTTTTTTTTGGGGTGCA TAGTTCATTAAAAAAAGTAATATAAAATAAGTTATATTAGCATTTGAATTAAAGTTCCACATGTGTTATTTCTCTACTTT GGCTGATTTTTCTTTGAAAATTTAGTTGAGAATGATTGTAGGATTGGTTCAACTACGAATTGAGCTACCATACCAAATCA CACCTTAGGTTCACTTTTTTGTTTAGAGTACATGTAGTGAAATAATCACGTTCAAGTCAGATAGACTCATTTTAAGCGGT AAAGCATCGTAGATTCCCTTCATGATTTAAGTATTTTAAACCAAAGTTAAATCTAGAGGTAACTGGTGAGTAAAAG 

CDS sequence (LotjaGi1g1v0707300.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATGGATCATGTGATTGCTGGGAAGTTTAAATTGGGAAGGAAAATTGGAAGTGGGTCTTTTGGGGAACTTTATATTGC TGTTAATGTACAAACTGGAGAGGAGGTGGCTGTCAAGTTGGAACCTGTGAAGACCAAGCATCCACAGCTTCACTATGAGT CAAAATTGTATATGCTTCTTCAAGGAGGAACTGGGATTCCCCATCTCAAGTGGTTTGGAGTTGAGGGAGACTACAATATC ATGGCAATTGACCTTCTTGGACCAAGTCTAGAAGATTTGTTCAATTATTGCAACCGGAAGTTAACATTGAAGTCAGTCTT GATGCTTGCTGATCAATTAATTAACAGAGTTGAATATATGCATTCAAGAGGTTTCCTTCACCGTGACATAAAGCCAGACA ATTTTTTAATGGGCCTAGGACGTAAAGCAAACCAGGTCTACGCCATTGACTTTGGCCTTGCAAAAAAGTATAGGGATCTT CAGACTCATAGGCACATCCCATACAGGGAAAACAAGAACCTTACTGGCACAGCTCGTTATGCAAGTGTCAATACTCATCT TGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGTTATGTGCTCATGTACTTCTTAAGAGGAAGTCTTCCTT GGCAGGGACTGAAAGCTGGAACCAAAAAACAAAAATATGATAAAATCAGTGAGAAGAAGATGTCAACTCCCATAGAGGTG CTCTGCAAATCATATCCTTCAGAGTTTGTATCATATTTCCACTACTGCCGATCATTGCGGTTTGAGGACAAGCCTGACTA TTCATATTTAAAGAGGCTTTTTCGAGATTTATTTATTCGAGAAGGTTATCAATTTGACTATGTTTTTGACTGGACTGTTT TGAAGTATCCGCAGATTGGTGGCAGCTCCAGAGGACGGCATGACAGTGGCAAGGCAGCTATGCATGCAGGACCATCTGTA CAAAAGCCAGAAAAGATTTCAGTTGGGAAAGAGATTCGAGAGAAGCTATCTGGTGCTGTTGAAGCATTCTCGCGGAGGAA CCCAACAAGTTCTAGTCCTCGTCGTGATCATTCCAAGCATAGGAGTTTTGAGGATGTAGCTGTACACAAGGATCCGTATC ATGATCAAGAGAAGGGACGCAGTTCCTCTCGATATGGCAGCAGCTCAAGAAGACCCGTAATCTCATCATCAACCAGGCCA AGTTCCTCAGCCGATCATACTGACAGTCGTACTGGCCGACTAACCTCAAGCGGTAGCCGCCCATCCGCAACACATAGAAA TCAACCCTCGTATGAGGCCAAACAGCCAACTTTCGTGCGCTCTGGATCCACGCGAGGCAATCGTGATGATCCTCTGAGGA GTTTTGAGCTCCTCTCTATCAGGAAGTAA 

Protein sequence (LotjaGi1g1v0707300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MMDHVIAGKFKLGRKIGSGSFGELYIAVNVQTGEEVAVKLEPVKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNI MAIDLLGPSLEDLFNYCNRKLTLKSVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYAIDFGLAKKYRDL QTHRHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMSTPIEV LCKSYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTVLKYPQIGGSSRGRHDSGKAAMHAGPSV QKPEKISVGKEIREKLSGAVEAFSRRNPTSSSPRRDHSKHRSFEDVAVHKDPYHDQEKGRSSSRYGSSSRRPVISSSTRP SSSADHTDSRTGRLTSSGSRPSATHRNQPSYEAKQPTFVRSGSTRGNRDDPLRSFELLSIRK 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D 1 336 336 3.2E-109
PANTHER 3 450 448 2.3E-265
PANTHER 3 450 448 2.3E-265
SUPERFAMILY 5 291 287 3.91E-83
CDD 9 283 275 0.0
ProSiteProfiles 10 279 270 29.488
SMART 10 288 279 4.9E-12
Pfam 11 228 218 1.0E-24
ProSitePatterns 16 39 24 -
ProSitePatterns 125 137 13 -
MobiDBLite 302 462 161 -
MobiDBLite 326 340 15 -
MobiDBLite 350 381 32 -
MobiDBLite 382 444 63 -
MobiDBLite 446 462 17 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0707300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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