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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0719000 |
| Transcript ID | LotjaGi1g1v0719000.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NBS-LRR disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XA39|RGA4_SOLBU Putative disease resistance protein RGA4; TrEMBL-Plants: tr|K7MYC5|K7MYC5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0719000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:128917940..128921864) extracted from Lotus japonicus Gifu genome v1.2.
CAAAGACTTTAACTCTCTACTACAAGCTTCAATCTCTTGTGTTTGATACCCTGGTAACCATTGCTATCTATGGCTGAATC ATTCCTCTTCTGCATTGCCGAATCACTGATAGCAAAACTTGCTTCTTGGGCATATGAAGAAACTTCCATGGTGCTGGGTG CATACAAAGATCTTCGAGAGTTTACACGAACTCTATCATACCTCAAAGCAGTGCTGTTAGATGCAGATCAGAAGCAGGAA GACAACCAGGAGCTTCAGGAATGGCTGAGGCAGATCAAACTCGTCTTCTCTGATGCTGAAAACGTGTTGGAAGAACTGGA GTATGAAAACCTTAGAAAGAAACATGGCATTGACAGTAACAAAATCAAGGTAGGACAGTTCTTCTCAAATTCCAATCCAA TTGTTATCCGTCATAGGATTGCTAGAAAGATCAAAGAAATCAAGAATGGATTAGATAGAGTAGCAGCTGATAGGCATAAG TTTGGTCTAAAAATCATTGATGTTGATGGAAGAGTGGTGCATAAGAGAGAAATGACATACTCCCATGTTGATTCAGATGT GATTGGAAGGGAACATGATAAAGAAAACATCATAAAGCTTTTGCTTTTGCATGGTAATGATAGAACTCTCTCTGTTATCC CCATTGTGGGGATTGGGGGTTTGGGAAAGACCACACTTGCAAAGCTTGTGTTTAATGATAGTAGGATGGATGAGTGTTTT GAGTTGAAGATGTGGGTGTGTGTTTCAGAAGGCTTTGACGTCAAGCAATTGATTGTTAAGATAATTAATTCTGCTAATGA TTCTAGTTCTGCTGATACTCCTGTTCACCACCAACAAAAATTTAAAGATTTGGATATCGAGCAGCTGCAGAATCGTCTCA GGAAGAAACTTAGAGGTCAGAAGTTCCTTCTGATCTTTGATGATGTGTGGAATGGAAGCCGTGTTGAATGGGTTCGGATG AGAGATTTAATACAGGTAGGTGCTGTTGGGAGTAAAATTGTAGTGACTACTCGTAGTCACAATATTGCTTCCATGATGGG CACCCTTCCATCTCACATTTTGGAAGGGCTTTCTCCAGAGGATTCATTGTCTGTGTTTCTCAAATGGGCATTTAAGGAAG GAGAAGAGAAAAAGTATCCACATTTGGTAAATATTGGGAGAGAGATTGCAAGAAAATGCGGAGGAGTTCCTTTGGCGGTG AGAACACTAGGGAGTTTACTATTCTCAAAATTTGACACAAATGAGTGGGAATATGTGAGGAACAATGAAATTTGGAATTT ACCGCAGATATCTGGAGATATTTTACCTGCTCTTAAGTTAAGCTATGATCAAATGCCATTCTATTTGAAACAATGTTTTG CTTTGTTCGCCCTTTACCCGAAGGATTATACATTTGATAGTTTTGATGTAACATCTCTTTGGGGGGCACTTGGTCTCCTT CCATCACAAAAGGGAAATCAGATATTGAAAAATGGTGCGAATCAATATTTGTATGAACTATTGTCAATATCTTTTATTCA AGATTTTGTGGACTATGGGATTGGTTTTACTTTTAAAATGCATTATTTGGTGCACGAGCTTGCTAAATCTGTTGCATTTG GAGACTGTCTTCTCACAGATTACTCTCTTGAATGTATGGACAGTGTGGCCAGGGGAGTCCGTCATCTGTCTTTTCGTAAA GATGTTTTGGGTGGTGAATTTGGTGTTCAGAGATTATCAGGTGTGAGAACCATACTATTTCCTATTGCTGGAGTTGGATC CCACAACAAAGCTTTCCTGGATGCATTCACCACAAGCTGCAAACACTTGAGATTTTTGGATTTAAGTGATTCTACATATG AGACTTTGCCTTTGTCCATTGGCAAGTTGAAACATTTAAGATTTCTAAGTCTTGAGAATAATACAAAAGTTAAGACACTT CCAGATTCCATCTGCAACCTCCTGAAGTTGGAGGTATTGATACTTATTGGGTGTACACAGCTTGAAACACTGCCTAAAGG TTTAAGAAAATTGATTAGTCTTCAACATTTGGAGATAACAACAAAGCTATGTGTTTTACCAGAGGATGACATTGAAAACT TGAGTTCTCTAAAAACTCTCAAAATTGAATGTTGCGACAATCTGGAGTCTTTGTTTGGAGGGATAAAACTCCCTAATCTG AGAGCATTGTGTGTTGCTAACTGCAGGAGTCTAAAGTCTTTGTCACTTGATAGTGATCATTTTCCTGCATTAGAGACTTT GTTAGTTGACAACTGTGACATGTTGAAATTGGCAGAGGTACAAGAGGGGCGAAACTCCAATTCGAGGTTGAAGGTTTTAA CTTTTGTTTCTTTGCCACAGTTGGTGACCTTGCCTCTTTGGCTTCAAGGGTCCATGACAACATTACAATTCTTGTCAATT TCAAGCTGCAACAGTCTTGTGGTGCTTCCTGAGTGGCTTTCAGCTATGAATTGTCTGAAAACACTTTGTATCACAGATTG CCCTAATGTGTTGTCTCTTCCCAATGACATCCATGGCCTTCCCACCCTCGAGCGTTTAGAAATTCATGGTTGTCCGGAAT CACTTGGAAAGTCTCAGCTGCAAGTTGGAGAGTCTTCACACAAACCTTAAACCATGGATGAATAGAAGAACTGGAGAGGA GGAAGAAGAATTGGAGCAAGAGAAAAAGGTAGAGGTAAGCTTTAATATCAGACACACATACATTTGGTTTTCATAAAAAT GTATACTGTTTTTCTTAGGACTTCTTTAATCTGCTTTTGTGTGATTTTTATTTACTTTTTTTTCTTTCTTTAGTGTATGA TTGGAGGAAGGAATAGTTGTTTCCCTACTTGAAGAGAAGGAAGGGCACACAATTAAAGGCCTGCAGTACAAAACTACAGA TGGTAAGGAATTATCAACTAAAAGGCCTCCTAGGCTCTTGCCATTTTTGTGATGGTCGTTTCTCAAACTAGCGCTGTTCT CTTTGTAATTCTAATATTAGAAACTTGTCAGCTTAAATATGTGAATTGTGATTTAGTTCCCATATTCAAAGTTGTTCTGA CTCTTTCTGTTAAGTAATTGGCACTCATGCGATCATCAACATTTTACAGATTCCCACTTATCTCTATCATGGTTTCTTAG CTGAAGTGGTCAAAGCAGCATCAGGACAATGCCAAATAGATAGATGCAAGAGAGTAGCTTCATATCCTCCTCCATGAGCC ATTCTGATGGCAAATGCATTCAACTTGCACCATCCTCTACCGGGAGGGGAATGACTACATCATTATCTGATATAGAAGTG CTGCGAATTGCGAAATCTTCTCTGGCCTTTGCATGTCCTGAATGATGCACCCAACCTTTGCCAACACCTTGAATCCTTGT ATATCTTGAGTTAGGTAATGTGCTCTCAGACCTTGAACTGAGGCAGCAATCTCTTCATCCTAATTTTTCATTTGAACTAA GAAAATGATAAGCATTCTTAAAGCTTTGTAGCTCTGCTTGTTCCTTAAGCTATCTTAAGTCTTAACCTTTCAATTTGCAG CCTTTACAAGGTATTTTGCTTATTCTCCAAAGTGTCGTCTCGTTGCTTTCAGGGTTAAACCCACAGCTCCTGCTTCTGTT TCCTACAACTGTTCCAGCTTACTGTAGAACACCTCAGCTGTATAAAACTGAATAGCAGTGAACAAGTCAGGTCAAGGTGT CCTCAAGATGAACTAGAATTGTTTTCCATCCTTCAGAAATCAGAAGGATTCAATTGACACATCCGTAAACATTGTAGCTT CAGTGTGTATTCTTGGTACTTGAAGAGTCAATATTTAGATGTATCAAATGATCACTTCTAAGAATTTGTAACTGCTTCAA GACTATCTTCACAGGGATGGTTTGAAAGCATTACTCTTTTGCACATAAAAAACATAAATGCAGCTCAGATGATAATATCC TTGCA
CDS sequence (LotjaGi1g1v0719000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGAATCATTCCTCTTCTGCATTGCCGAATCACTGATAGCAAAACTTGCTTCTTGGGCATATGAAGAAACTTCCAT GGTGCTGGGTGCATACAAAGATCTTCGAGAGTTTACACGAACTCTATCATACCTCAAAGCAGTGCTGTTAGATGCAGATC AGAAGCAGGAAGACAACCAGGAGCTTCAGGAATGGCTGAGGCAGATCAAACTCGTCTTCTCTGATGCTGAAAACGTGTTG GAAGAACTGGAGTATGAAAACCTTAGAAAGAAACATGGCATTGACAGTAACAAAATCAAGGTAGGACAGTTCTTCTCAAA TTCCAATCCAATTGTTATCCGTCATAGGATTGCTAGAAAGATCAAAGAAATCAAGAATGGATTAGATAGAGTAGCAGCTG ATAGGCATAAGTTTGGTCTAAAAATCATTGATGTTGATGGAAGAGTGGTGCATAAGAGAGAAATGACATACTCCCATGTT GATTCAGATGTGATTGGAAGGGAACATGATAAAGAAAACATCATAAAGCTTTTGCTTTTGCATGGTAATGATAGAACTCT CTCTGTTATCCCCATTGTGGGGATTGGGGGTTTGGGAAAGACCACACTTGCAAAGCTTGTGTTTAATGATAGTAGGATGG ATGAGTGTTTTGAGTTGAAGATGTGGGTGTGTGTTTCAGAAGGCTTTGACGTCAAGCAATTGATTGTTAAGATAATTAAT TCTGCTAATGATTCTAGTTCTGCTGATACTCCTGTTCACCACCAACAAAAATTTAAAGATTTGGATATCGAGCAGCTGCA GAATCGTCTCAGGAAGAAACTTAGAGGTCAGAAGTTCCTTCTGATCTTTGATGATGTGTGGAATGGAAGCCGTGTTGAAT GGGTTCGGATGAGAGATTTAATACAGGTAGGTGCTGTTGGGAGTAAAATTGTAGTGACTACTCGTAGTCACAATATTGCT TCCATGATGGGCACCCTTCCATCTCACATTTTGGAAGGGCTTTCTCCAGAGGATTCATTGTCTGTGTTTCTCAAATGGGC ATTTAAGGAAGGAGAAGAGAAAAAGTATCCACATTTGGTAAATATTGGGAGAGAGATTGCAAGAAAATGCGGAGGAGTTC CTTTGGCGGTGAGAACACTAGGGAGTTTACTATTCTCAAAATTTGACACAAATGAGTGGGAATATGTGAGGAACAATGAA ATTTGGAATTTACCGCAGATATCTGGAGATATTTTACCTGCTCTTAAGTTAAGCTATGATCAAATGCCATTCTATTTGAA ACAATGTTTTGCTTTGTTCGCCCTTTACCCGAAGGATTATACATTTGATAGTTTTGATGTAACATCTCTTTGGGGGGCAC TTGGTCTCCTTCCATCACAAAAGGGAAATCAGATATTGAAAAATGGTGCGAATCAATATTTGTATGAACTATTGTCAATA TCTTTTATTCAAGATTTTGTGGACTATGGGATTGGTTTTACTTTTAAAATGCATTATTTGGTGCACGAGCTTGCTAAATC TGTTGCATTTGGAGACTGTCTTCTCACAGATTACTCTCTTGAATGTATGGACAGTGTGGCCAGGGGAGTCCGTCATCTGT CTTTTCGTAAAGATGTTTTGGGTGGTGAATTTGGTGTTCAGAGATTATCAGGTGTGAGAACCATACTATTTCCTATTGCT GGAGTTGGATCCCACAACAAAGCTTTCCTGGATGCATTCACCACAAGCTGCAAACACTTGAGATTTTTGGATTTAAGTGA TTCTACATATGAGACTTTGCCTTTGTCCATTGGCAAGTTGAAACATTTAAGATTTCTAAGTCTTGAGAATAATACAAAAG TTAAGACACTTCCAGATTCCATCTGCAACCTCCTGAAGTTGGAGGTATTGATACTTATTGGGTGTACACAGCTTGAAACA CTGCCTAAAGGTTTAAGAAAATTGATTAGTCTTCAACATTTGGAGATAACAACAAAGCTATGTGTTTTACCAGAGGATGA CATTGAAAACTTGAGTTCTCTAAAAACTCTCAAAATTGAATGTTGCGACAATCTGGAGTCTTTGTTTGGAGGGATAAAAC TCCCTAATCTGAGAGCATTGTGTGTTGCTAACTGCAGGAGTCTAAAGTCTTTGTCACTTGATAGTGATCATTTTCCTGCA TTAGAGACTTTGTTAGTTGACAACTGTGACATGTTGAAATTGGCAGAGGTACAAGAGGGGCGAAACTCCAATTCGAGGTT GAAGGTTTTAACTTTTGTTTCTTTGCCACAGTTGGTGACCTTGCCTCTTTGGCTTCAAGGGTCCATGACAACATTACAAT TCTTGTCAATTTCAAGCTGCAACAGTCTTGTGGTGCTTCCTGAGTGGCTTTCAGCTATGAATTGTCTGAAAACACTTTGT ATCACAGATTGCCCTAATGTGTTGTCTCTTCCCAATGACATCCATGGCCTTCCCACCCTCGAGCGTTTAGAAATTCATGG TTGTCCGGAATCACTTGGAAAGTCTCAGCTGCAAGTTGGAGAGTCTTCACACAAACCTTAA
Protein sequence (LotjaGi1g1v0719000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAESFLFCIAESLIAKLASWAYEETSMVLGAYKDLREFTRTLSYLKAVLLDADQKQEDNQELQEWLRQIKLVFSDAENVL EELEYENLRKKHGIDSNKIKVGQFFSNSNPIVIRHRIARKIKEIKNGLDRVAADRHKFGLKIIDVDGRVVHKREMTYSHV DSDVIGREHDKENIIKLLLLHGNDRTLSVIPIVGIGGLGKTTLAKLVFNDSRMDECFELKMWVCVSEGFDVKQLIVKIIN SANDSSSADTPVHHQQKFKDLDIEQLQNRLRKKLRGQKFLLIFDDVWNGSRVEWVRMRDLIQVGAVGSKIVVTTRSHNIA SMMGTLPSHILEGLSPEDSLSVFLKWAFKEGEEKKYPHLVNIGREIARKCGGVPLAVRTLGSLLFSKFDTNEWEYVRNNE IWNLPQISGDILPALKLSYDQMPFYLKQCFALFALYPKDYTFDSFDVTSLWGALGLLPSQKGNQILKNGANQYLYELLSI SFIQDFVDYGIGFTFKMHYLVHELAKSVAFGDCLLTDYSLECMDSVARGVRHLSFRKDVLGGEFGVQRLSGVRTILFPIA GVGSHNKAFLDAFTTSCKHLRFLDLSDSTYETLPLSIGKLKHLRFLSLENNTKVKTLPDSICNLLKLEVLILIGCTQLET LPKGLRKLISLQHLEITTKLCVLPEDDIENLSSLKTLKIECCDNLESLFGGIKLPNLRALCVANCRSLKSLSLDSDHFPA LETLLVDNCDMLKLAEVQEGRNSNSRLKVLTFVSLPQLVTLPLWLQGSMTTLQFLSISSCNSLVVLPEWLSAMNCLKTLC ITDCPNVLSLPNDIHGLPTLERLEIHGCPESLGKSQLQVGESSHKP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | 2 | 126 | 125 | 1.69481E-10 | ||
| Pfam | 11 | 96 | 86 | 8.4E-17 | ||
| PANTHER | 38 | 797 | 760 | 3.2E-143 | – | |
| PANTHER | 38 | 797 | 760 | 3.2E-143 | – | |
| Coils | 66 | 86 | 21 | - | – | |
| Gene3D | 150 | 326 | 177 | 7.7E-40 | – | |
| SUPERFAMILY | 152 | 432 | 281 | 9.29E-66 | ||
| Pfam | 168 | 399 | 232 | 2.3E-43 | ||
| PRINTS | 189 | 204 | 16 | 2.3E-19 | – | |
| PRINTS | 273 | 287 | 15 | 2.3E-19 | – | |
| Gene3D | 334 | 400 | 67 | 4.7E-5 | – | |
| PRINTS | 370 | 384 | 15 | 2.3E-19 | – | |
| SUPERFAMILY | 496 | 828 | 333 | 8.33E-37 | – | |
| Gene3D | 547 | 840 | 294 | 7.0E-42 | ||
| PRINTS | 669 | 685 | 17 | 2.3E-19 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi1g1v0719000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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