Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi1g1v0732100.1

Overview

Field Value
Gene ID LotjaGi1g1v0732100
Transcript ID LotjaGi1g1v0732100.1
Lotus japonicus genome version Gifu v1.2
Description Receptor-like kinase; TAIR: AT2G48010.1 receptor-like kinase in in flowers 3; Swiss-Prot: sp|P93050|RKF3_ARATH Probable LRR receptor-like serine/threonine-protein kinase RKF3; TrEMBL-Plants: tr|A0A072U3F3|A0A072U3F3_MEDTR LRR receptor-like Serine/Threonine-kinase RKF3, putative; Found in the gene: LotjaGi1g1v0732100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:130368058..130374792) extracted from Lotus japonicus Gifu genome v1.2.

CTAGTTCACTTATTTATAAAGAAAAATTATTTGTCAATATCCATATGTAGAGACATTCAAAAGATAGCCAGAGTGAGAAA TAAAGAGTAGAAAGAAAAGTAATACATATGGTATATGATTGTCCCTACATAAAGAATGACTCATCAGCTTCATTAAGCAT GCTTCCTCTTCCTAAAAGACATAATGCCTTGTTTGGATTTCTATTTGGGAGGGTCACACCCAGTTTGCCTCATTTGTAAC ATTGTTTGGGACTCAGTTTCAACCATAAACCAACATTCATCGCAATCCAGTCCATGCGTTTCTTTTTTCTGAAATTAGTT TCAGTGACATAAATGACACAAATGATCTTCATTCTCCTTATCAAATCTTTCATTCTAGTTCATGTAGATGGCTGAGCTGG TTAACTACAGTTAGATAATTGATTAACTGAGTTAATTATCAACTCAATTAGTTATGTTCTTTCTCCTTTATACCTTGTAA TAAAAAGACACAATCCAATCCATATATTTCACTTACTTATGCATTTTAATGTTCAGTTTTATTTAATTTTTTGATTTTTA GTTTTAATACAAACACACACCAATTAGTCATGCAGGTAAGAGATGAGAGCTTCATTTGACATGCTTGAGGGCTTGATACC TTGAGAGCTTGTGTTCTTGCATCAAGATGTCCAAGTTCAACAAAGTACTAATTGAGTAAGTTGAGTTCGTGCAAGCATCT GCACCTACCACTTCCAAACCTCATGAACATCACCACCCGACAAGAATTCCTCAGCCGCATCCCCAACGACACCCTTCAAA CCTTTCAGAATGACTGCAACCAGTACCTCGCCAACAACGCCCGCTCTTGCCCCCTCTGCACCTCAATCGTCCTCACCTAC TTCACCGGATCCACCGTCAGCAAGGTCTCCGATTGCAGGTCGTACGCCACTATCTACGCCGCTTCTCTTTCCGATCAGTA CGGACCCACCAGCCCCGGAACCGCTAGTTGCTTGTTCGGCCTTGATTTCTCCAATTCTGGGATTCAAGCGGAGGAATAGT GAAAGAGCAAAGGAAGGTAAAGCTATTGAGATTACTCTGGGTGGTTCTGGTTTGGATTCAATGAGCCAGAGCACCACTTT GATTAGGTTCACATACAATGAGATTAAGAAAGCCACTAGGAATTTCTCCAGGGATAACATAATTGGGATGGGGGGTTATG GGAATGTTTATAAAGGGGTGCTTTCTGATGGAAGCCAGGTTGCATTGAAAAGGTTCAAGAATTGTTCTGTTTCTGGGGAT GCAAGTTTCACTCATGAAGTTGAGGTTATTGCTAGTGTCAGGCATGTGAATCTTGTTGCTCTAAGGGGTTATTGTACTGC CACCACTAATTTAGAAGGTCACCAGAGGATTATTGTGACTGATTTGATGGAGAATGGGAGTCTCTATGATCACTTGTTTG GTTCTGCAAAGAAGAAACTCAGCTGGCCGATTCGTCAGAAGATCGCTCTCGGCACGGCGAAGGGGTTGTCCTATTTGCAT TATGGGGCTCAACCTTCAATCATCCATAGGGATATTAAGGCTAGTAACATTCTTCTGGATGAAAAGTTTGAAGCAAAAGT TGCTGACTTTGGGCTAGCAAAGTTCAAACCCTGAGGGAATGACACACATGAGCACAAGGGTAGCTGGGACTATGGGGTAT GTGGCTCCTGAGTATGCTTTTGAGTGGGAAGAAGGCTCTTCAGTCAAACGACGAAGGCCAACCCACTGCTCTCACTGATT TAGCTTGGTCATTGGTTAGGAATGGCGCAGCTTTGGATGTTATTGAAGATGGGTTACCAGAACCTGGTTCCCCACAGGTT CTTGAGAAATATGTGTTGGTCGCTGTGTTATGTTCCCATCCACAGCTATATGCTAGGCCAACAATGGATCAGGTTGTTAA GATGCTGGAGACAGATGATTCAGTATCAGTGCCCTCAATTATGGAAAGACCAATCCCTTTCATTGCTGGGAGGCTTGACA TTGAGAAATCTGCCAGCAGTAACAACTCCGGTCAGCTCTGCAGTCCGACGGGTTATCAAGCGTATACAATGCAAGGTCGC CGCCTTTCTAATTCTAAAGAGGAAGAAGAAAGCTCATATATAACACAAAGTCGCCACCTTTCTAATTCTAAGGAAGAAGA CGAAGAAGAAATCTACAGATCCGGAACTGTGAGCAAAGACTGAGTCTGGGGAAATTGGATTGCCTTTCACTAGCTAGTGT TGACTTGATTTGTTTGTACATTTAGATTTTTAGAACGACGAGGGAACCACGGCCATAAAAACATTCCCAAGTCGTCATGG CCTCCGAGAGGTTGTCACGGTCTCTCACGGTTTCTACCGCGCTTCGGAGCTTCACTACATCAATCCTTGCCTAAGGACCC TTCCTCAATGATGCCCAACCTCCTCTGAATGTTTCAAGGATGAAAAATGGGAAAGAAGGGAAGAGATATTGAAAATTTTG TGATTTGGCCTTTTATTGAGTTTCCGCCGTCTTAAGTTCGCTTGAGTCTAGTTAAGTTCGTTCAAGTGAACTTTTCTTCA AGCTGAAGTACTTGCAAACCGCCTTCAGTTCGCTCAAGCCAACCTGAGTTCGCTCAAGCCAACTTCATAGCAAACCTTCT TTTTCCTTTATGTAAAATGATCACTTGAGCTAACTTTGGGCAAAGTTCCTTTCATCTGTTTTGTTTTTGGTCTGCTTGAG CCAACTTTGAGCCAACAATCCTCACTTGGTTTTCTTGCTCAAGAATCAACCATCTTCAAGTGATCAACTTATTCCTATAT CAAAATTAAGACATTAAATACTAAAAGCATAATGTTTATATTATTTTTATGCTAAGACTACATATTTTCTAAATAAGTTA CTTTGGGGATAAAATGATCAACAATGCAAGCATACATGTCAAATAAGTGCCTATAATGATAATGAAAACATGTAAATTTG GCACTTATCAGTTTGGCAACTTCAAAAGTACATTTGCCAAACTCAGTTTCGAGTTCAACCATAAGCCCACATTCATCTCA ATCCAATCCAGTCGATGCCTTTCTAAACTGTTCACCAAATTAGTTTCAATGACTCAAAAGATCTTCATTCTCATTTTCAA GTCTTTCATTCTAGTTCATGCAGATGACCGACCTGGTTAACCATAGTTAGATAATTGGTTAACTTAGTTAATTATCAACT CAATTAGTTGTGGTCTTTCTCCTTTATACCTTGTTATAAAAAGACACAATTCAATCATAAATTTCACTTGCTTATTGCAT TTTAATGTTAAGTTTTATTTAGTTTTTCATTTTAACTTATTTTTAGCTTTAGTACAAACACACACCAAGTCATGCGGGTC AGAGGTGGGAGCTTCATTTGGCATGCTTTATCTTTCTTGAGGGCTTGATACCTTCAGAGGTTATGTTCCGCATCAAGATG TCCAACCTCTACTAGGAGCACGTTTTTTTATCGACAGATTAAATGGAGATGGTTATTAGAGTTGATTGATTTTCACATCA AGGGGGTACATTTAGGAGGCCACAATTAGAGGACTAGGAAATAGATAATTATATATGTTTTTATCACTTAACTAATGCCA AAATATTACAAAAAGAGCATACGGTTAATGAAAGAAACATACTCATCTTTGGACCATAAGACCAAGTTAGGTTTTTCCGT TTTTAGCTCAGCCTCTCAGTTTCATTATGTGAACAATGATGAATGTGATACGAAAAGAGATAGAAAGAAAGAAAAAATAG ATTTTGTGTTAAGTGTCTAATTACCATTACTATTTATAAATTATAAATGTGAAATTAAAAATGCTCATTTAAAACAAGTG TTCACGCTTGGTGAGCAATAGAAGCAACAGAAGTAGGATCGCATAAAAATCTAGCCACTTTCGGTATAAATTGAATCAAC TCCTTTTACAAGATAAACATTTTCCTTTTATAGTGTGCATTAATACAAACCCTAGGTCTAATCACCTAATGGACTTTTGG ACATCATAACTACTCACCTCAAGAGCCCTTACAATTTGCCGAAGGCCTCATTTTGCCCTATTAAGCAAAAACCACAAGTA TTCCTAATGAATGGATCTAGATCGAAGGGGCGCTCTACTAGCTTCTGTGCGGCTCGTAGGCTTGCCTTACTCACTTTGTT GAGAGGTGGCCCCACCCTCGGGTCTACTTTACTAAGACCCTCTACTCTCTACGACCATAACCATTTTGAGGAAGATCGCT CGACCTAAGTTTCCCCGGTGTAGGCCTACGACCTACAAGGCGCTTGATCAGTCCAACAAATAGTAGTTGGGTGGGTTGAG TTCGTGGAAGCATCTTGCATCTTATAGTCAAAGTGTGTGTCTTTTTGGTAAATTTTTAAATTAATCAATTATCAACAAAA ACAACTTAAGTCGTAGTTGTCTTTGTTGGCTGCTTAGCTTTGATTGAACAAACAACCCCATCATCATCATCATTCAGACA GCATTAACAAACTCAACCATATTAACTAGTCAAACACACACCACAACCCCCCTCTCTCTCACCAACCATGTCACTCTCCT TCCTCATCTTCCTCCTCTTCTTCACCACTTCCCTCGCCGCCGACGACGCTCCATGCCCCTTCAACATCACCGTCCTCCGC GCCGTCAGCAACGGCCGCACCCCCACCTTCGACTCCAACTCCCGCTGCCAATACATCCTCCAAGCCCTCCACCTCCTCCA AGCCGACTACCTCCGCCGCACCTCCCGCTTCGTCCCTCCTCTCAACTCCTCCGAAGCCTGCTGGACCGCCTTCGAATCCT TCATCAACGAATTCGCCCGCCCCAGCTTCAACATCCGCTCCTCATGCGGCTTCCAAACCTCATGGATCTCCCAAGGTTGC ATGAACATCACCACCCTGCAACAATTCCAAGCCATCCCCCCAAACTCCACACTCCAAGCCGTTCGCGACAACTGCAACCA ATCCCTCACCAACAACGCCCCCTGCGCCCTCTGCACCACCAAGTTGTCAACCCTTCTCTCCTACTTCACCGGACCCACCG TCGGCAACGTCTCCGAGTGCAGACCCTATACCCAAATCTACGCCGCCAGTTTCTCCGATCAGTACGGACCCACCGACCCA GGAACCGCAAAGTGCTTGTTCGGTCTTGATTTCTCCAATTCCGGTTCCGGTAAGAGCAAAACCCTAGTAATCGCGCTTGT TACTGTTTTCTGTGTTCTGGGGTTGTTGATAGTTTTTGGAATTTGGGGGTACTTGAGATTCAAGCGGAGGAATGATGATA GAGCCAAGGAAGGTAAAGCTATTGAGATTACTCAGGGGGGTTCTGGGTTGGATTCAATGAGCCAGAGTACTACTTTGATT AGGTTTACCTACAATGAGATTAAGAAAGCAACTAGGAATTTTTCAAGGGATAACATAATTGGGATGGGGGGTTATGGGAA TGTTTATAAAGGGGTGCTTTCTGATGGAAGCCAGGTTGCTTTGAAAAGGTTCAAGAATTGTTCTGTTTCTGGGGATGCTA GTTTCACTCATGAGGTTGAGGTTATTGCTAGTGTCAGGCATGTGAATCTTGTTGCTCTTAGGGGTTATTGTACTGCCACC ACTAACATGGAAGGTCATCAGAGGATTATTGTGACTGATTTGATGGAGAATGGGAGTTTATATGATCACTTGTTTGGTTC TGCGAAGAAGAAGCTTAGCTGGCCGATTCGTCAGAAGATCGCTCTCGGCACGGCCAAGGGGTTGTCTTATTTGCACTATG GGGCTCAGCCTTCGATTATCCATAGGGATATTAAGGCTAGCAATATACTTTTGGATGAGAAGTTTGAAGCAAAAGTTGCT GACTTTGGGTTAGCTAAGTTCAACCCTGAGGGAATGACACACATGAGCACGAGGGTGGCTGGGACGATGGGGTATGTGGC TCCTGAGTATGCTTTGTATGGGCAATTGACGGAGAGGACTGATGTGTTTAGTTTCGGCGTTGTGCTTCTCGAGCTTTTGA GTGGGAAAAAGGCTCTTCAGTCGAACGACGAAGGGCAACCCACTGCTCTCACTGATTTAGCTTGGTCATTGGTTAGGAAT GGCGCAGCTTTGGATGTTATTGAAGATGGGTTACCAGAACCTGGTTCCCCACAGGTTCTTGAGAAATATGTGTTGGTCGC TGTGTTATGTTCCCATCCACAGCTATATGCTAGGCCAACAATGGATCAGGTTGTTAAGATGCTGGAGACAGAGGATTCAG TATCAGTGCCCTCAATTATGGAAAGACCAATTCCTTTCATTGCTGGGAGGCTTGACATTGAGAAATCTGCCAGCAGTAAC AACTCCGGTCAGCTCTGCAGTCCGACGGGTTATCAAGCGTATACAATGCAAAGTCGCCACCTTTCTAATTCTAAGGAGGA AGAAGAAAGCTCATACATAACACAAAGTCGCCGCCTTTCTAATTCTAAGGAAGAAGAAGAAGATGAAGAAGAAATCTCCG GATCCGGAACTGTGAGCAAAGATTGAGTCTGGGGAAATTGTATTATTGCCTTCCACTAGCTAATACAAGATTGATTTGTT TGTACATTTAGATTTTAAGATTGTATGTTTGCTGAAGCTTTTTCTGTTGTAAAACCAAAACGATGTACAAAACTTTGATT CTTTGTAGAGTTTGTTTCAATGGCAATAGAGGATGATCAAGTTTTGCTGATTTTGGTGTCACATTACAATATTGAGATTT GAACTAACCTTTCAT
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0732100.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGACTGCAACCAGTACCTCGCCAACAACGCCCGCTCTTGCCCCCTCTGCACCTCAATCGTCCTCACCTACTTCACCGGA TCCACCGTCAGCAAGGTCTCCGATTGCAGGTCGTACGCCACTATCTACGCCGCTTCTCTTTCCGATCAGTACGGACCCAC CAGCCCCGGAACCGCTAGTTGCTTGTTCGGCCTTGATTTCTCCAATTCTGGGATTCAAGCGGAGGAATAGTGAAAGAGCA AAGGAAGGTAAAGCTATTGAGATTACTCTGGGTGGTTCTGGTTTGGATTCAATGAGCCAGAGCACCACTTTGATTAGGTT CACATACAATGAGATTAAGAAAGCCACTAGGAATTTCTCCAGGGATAACATAATTGGGATGGGGGGTTATGGGAATGTTT ATAAAGGGGTGCTTTCTGATGGAAGCCAGGTTGCTTTGAAAAGGTTCAAGAATTGTTCTGTTTCTGGGGATGCTAGTTTC ACTCATGAGGTTGAGGTTATTGCTAGTGTCAGGCATGTGAATCTTGTTGCTCTTAGGGGTTATTGTACTGCCACCACTAA CATGGAAGGTCATCAGAGGATTATTGTGACTGATTTGATGGAGAATGGGAGTTTATATGATCACTTGTTTGGTTCTGCGA AGAAGAAGCTTAGCTGGCCGATTCGTCAGAAGATCGCTCTCGGCACGGCCAAGGGGTTGTCTTATTTGCACTATGGGGCT CAGCCTTCGATTATCCATAGGGATATTAAGGCTAGCAATATACTTTTGGATGAGAAGTTTGAAGCAAAAGTTGCTGACTT TGGGTTAGCTAAGTTCAACCCTGAGGGAATGACACACATGAGCACGAGGGTGGCTGGGACGATGGGGTATGTGGCTCCTG AGTATGCTTTGTATGGGCAATTGACGGAGAGGACTGATGTGTTTAGTTTCGGCGTTGTGCTTCTCGAGCTTTTGAGTGGG AAAAAGGCTCTTCAGTCGAACGACGAAGGGCAACCCACTGCTCTCACTGATTTAGCTTGGTCATTGGTTAGGAATGGCGC AGCTTTGGATGTTATTGAAGATGGGTTACCAGAACCTGGTTCCCCACAGGTTCTTGAGAAATATGTGTTGGTCGCTGTGT TATGTTCCCATCCACAGCTATATGCTAGGCCAACAATGGATCAGGTTGTTAAGATGCTGGAGACAGAGGATTCAGTATCA GTGCCCTCAATTATGGAAAGACCAATTCCTTTCATTGCTGGGAGGCTTGACATTGAGAAATCTGCCAGCAGTAACAACTC CGGTCAGCTCTGCAGTCCGACGGGTTATCAAGCGTATACAATGCAAAGTCGCCACCTTTCTAATTCTAAGGAGGAAGAAG AAAGCTCATACATAACACAAAGTCGCCGCCTTTCTAATTCTAAGGAAGAAGAAGAAGATGAAGAAGAAATCTCCGGATCC GGAACTGTGAGCAAAGATTGA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0732100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MTATSTSPTTPALAPSAPQSSSPTSPDPPSARSPIAGRTPLSTPLLFPISTDPPAPEPLVACSALISPILGFKRRNSERA KEGKAIEITLGGSGLDSMSQSTTLIRFTYNEIKKATRNFSRDNIIGMGGYGNVYKGVLSDGSQVALKRFKNCSVSGDASF THEVEVIASVRHVNLVALRGYCTATTNMEGHQRIIVTDLMENGSLYDHLFGSAKKKLSWPIRQKIALGTAKGLSYLHYGA QPSIIHRDIKASNILLDEKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERTDVFSFGVVLLELLSG KKALQSNDEGQPTALTDLAWSLVRNGAALDVIEDGLPEPGSPQVLEKYVLVAVLCSHPQLYARPTMDQVVKMLETEDSVS VPSIMERPIPFIAGRLDIEKSASSNNSGQLCSPTGYQAYTMQSRHLSNSKEEEESSYITQSRRLSNSKEEEEDEEEISGS GTVSKD
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 20 20 - –
MobiDBLite
mobidb-lite
1 50 50 - –
PANTHER
PTHR27001
74 415 342 1.0E-186 –
PANTHER
PTHR27001:SF675
74 415 342 1.0E-186 –
Gene3D
G3DSA:3.30.200.20
90 198 109 1.5E-29 –
SUPERFAMILY
SSF56112
101 418 318 7.46E-77
IPR011009
SMART
SM00220
119 369 251 7.7E-32
IPR000719
ProSiteProfiles
PS50011
119 412 294 35.326
IPR000719
Pfam
PF00069
120 331 212 3.9E-43
IPR000719
ProSitePatterns
PS00107
125 147 23 -
IPR017441
CDD
cd14066
125 394 270 6.06628E-94 –
Gene3D
G3DSA:1.10.510.10
200 404 205 6.0E-59 –
ProSitePatterns
PS00108
244 256 13 -
IPR008271
MobiDBLite
mobidb-lite
443 486 44 - –
MobiDBLite
mobidb-lite
446 469 24 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0732100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…