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LotjaGi1g1v0732300.1

Overview

Field Value
Gene ID LotjaGi1g1v0732300
Transcript ID LotjaGi1g1v0732300.1
Lotus japonicus genome version Gifu v1.2
Description Breast carcinoma-amplified sequence 3 like; TAIR: AT1G03380.1 yeast autophagy 18 G-like protein; Swiss-Prot: sp|Q8GUL1|AT18G_ARATH Autophagy-related protein 18g; TrEMBL-Plants: tr|A0A0B2SF76|A0A0B2SF76_GLYSO Breast carcinoma-amplified sequence 3 like; Found in the gene: LotjaGi1g1v0732300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:130385154..130391680) extracted from Lotus japonicus Gifu genome v1.2.

GAAGAAGATTAGAAGAGTGAGAAAAGCAAAGAGAACAGTGTAACCAAACTGAGACGAAGTCTCACAACACTGTTGCAGCC ATGGCTGAGAAACAACGAAAGCGAAAGCGAACTGTAAGGTAAACTTCGACACAAACTCACGAACTCAACAAAAAAAAAAA CAGAGTTAGCAGAGGAAGACGAAGACATCGGAACTTGCCTTTCAAGTCAAACGCGACTGCGATCGCTTTTTTTGCTGATC GGATATGTTGTTTGTTACCGGCGTCGGAGGCGGTGGCGGTTGCGGCTGACGGTGGCGGAATAGAAACCGAGACTAAGACC AGTGCCGAAGGAGAACAACAACGACAATCATGAAGAAAGGGAAGGGGAAGAACAACGGCTTGCTGCCGAATTCCTTGAGG ATCATCTCTCTTTGCCTCAAAACTGTCTCCACCAACGCCACCACCGTTGCTTCCACCGTACGCTCCGCCGGCGCCTCCGT TGCCGCTTCAATTTCCTCTACTTCCGAGGATCACAAAGACCAGGTACTACTACAATCAATTAGTAGATACATACAATACA GTTCAATACTCAATCAATTTGGCTGATGATTTTACTGTTTTCCTTTTTAGTTTGCTCAGTTCAATTTTTGCTCATGTATG TATCTGGTGTCATGTTCTTTGTGATAGGTAACCTGGGCTGGTTTTGATAAACTAGAGATTGATCAATCTACCTTCAAACA TGTCCTGTTACTTGGTTATCTAAACGGATTTCAAGTTCTTGATGTGGAGGATGCTTCTAGGTTCAGTGAGTTAGTCTCGA AGCGCGACGGTCCGGTTTCTTTCTTACAGATGCAGCCGTTTCCTATAGGATGCAATGGCCAAGAGGAGGGGTTCAGAAAG TCGCATCCGTTGCTGTTGGTTGTTTCTGGCGATGATGCTGGTAATGGAAACCAAAACAGTAACAATTTGAGTGGTTTAGG AAGAGATGGTAATGTGGAGACTCTACCTGGGAATAGTGGAAACTATGCGACGGCTGTTCGGTTTTACTCCTTGAAGTCTC AATGTTACGTTCATGTTCTGAGATTCCGAACTTCCGTGTGTATGATCAGATGTAGTTCGCGGATTGTAGCTGTTGGTCTT GCCACCCAAGTATGCAGTGGTTTCACCGATATCTTTTTGAACTGTTTAATATTTACATTAGAACATATCACGGATCTATT CGACTTAGGTTTTCATGTCATGTATGCTGTGATTGATTTACTTTCTTGATGATTTTTGCAGATATACTGCTTTGATGCTG CAACCCTTGAGAATAAGTTCAGTGTTCTAACTTACCCTATTCCCCAGCTTGCTGGACAAGGAAAAACTGGTGTTAATGTT GGTTATGGTCCAATGGCTGTGGGTCCAAGGTGGTTAGCATATGCTTCCAACAGCCTGCTTCCATCAAATTTAGGTTGCTT AAGCCCACAAAACCTTGGTGTTTCTCCTGGAGTTAGTCCATCAACTTCTCCAAGCAATGGTCATTTAGTGGCTCGTTATG CAATGGAGTCCAGTAAACATTTGGCCGCTGGAATAATCAAATACTGTCAAGAGCTGCTTCCTGATGGTTCTGCTTCTCCA ATTCCGTTGAATTCAGGTGGGAAAGTCGGCAGGGTTACAGGAATTGATATGGATAATGCAGGCATGGTTGGTATTGTTTC ATGATGGGCACAACTAATTGATAATTTATTGTATGTGAATGTTAATCTCTGACTTGTTCTTGGTTCACCGGTTTATTGCA GGTAGTTGTTAAGGATTTTGTTTCCAGAGTTGTCATTTCACAATTCAAAGCTCACTCAAGTCCTATATCTGCACTATGTT TTGACCCTAGTGGGACCCTTCTTGTCACTGCATCAGTCTATGGGAATAGCATCAATATATTCCGGATAATGCCGTCACGC ACATACAAGGGTTCAGGAGTTCCAGGCTACAACTGGAGCTGTTCTCATGTGCATCTTTATAAACTTCATCGTGGAATAAC ACCAGCTGTTAGTATATAGTAGTTATAATGTACTTATTTTATTTGTTTTAATTTGATATTACTTTTAGCCTCCATTGATG CCCTTTTGATCTCCTTGTTTTCTTCTTTGACAGATGATTCAGGACATTTGTTTCAGTCATTTTAGTCAGTGGATTGCTAT TGTCTCATCCAAAGGAACTTGTCATCTTTTTGTTTTGTCACCCTTTGGAGGTGATACTGGTTTCCAAGTAATTAGTTCTC AGGGTGAAGAACCCTCCCTACTTCCAGTTTTTTCTCTACCATGGTGGTCTACTTCCTCTTCGGTTTCTCATCTGCAATCA TTGCCTCCTCCAGCACCTGTTGTCCTTTCTGTGGCTAGCCGGATAAAATATAGCAGTTTTGGGTGGCTTAATTCAGTTAA TAATTCTGCTGCTAATGCGACAGGAAAAGTTTTTGTTCCGTCTGGTGCTATTGCTGCCATCTTTCACAATTCCTTATCTC ATTCACAACAACCCATTAACTCAAAGGAAAACCCCTTGGAATATATATTGGTATACACACCTTCAGGTCATGTAGTTCAG CATGAACTTCTGCCATCTGTTGGTTCAGAAACAAGTGATAGTGTTTCAACGAACCAGTCAACTTCACTCCTTCTGCAGGA GGATGAGTTCAGAGTCAAAGTTGAACCTATTCAATGGTGGGACGTATGTAGACGGTCAGAATGGCCAGAAAGAGGGGACC CTTTCAACAATACATTCGATAACGATAAAGAAGGAGGTATGGAGAAAGTTCAAGAGAAAATGTGTTATGGTAACATCCAT CGATTGGATTTTCTGGATATAAGTGATGGTATCAGGGAAAAGACGGTTAAACCTTCTAGTGGGAATCCCCAAGATAGGTC TAATAGCTATCTGTCTAATGCAGAGGTTCAAGTGAATTTCAGAGGGCTGCCTATATGGCAAAAGTCCAAGGTATTCATTG TATTCTGTTTTTATTTTCATATACAATGCTAGGCACTGGTGGTTAACGATCTTGTTTCTTCAGATTGGTTTCTATACAAT GAGTTGTGTAAGAACTAGTTTTAATGCTGGTGGAGAGTCTGAAATTGAAAAAGTGTCTGCTAAAGAAGTTGAAATAAGAC GGAAGGAGCTGCTGCCTGTTTTTGACCATTTTCACAGCATCAGACCAAGCTGGAACGAGAGGTGGTGACTATTTTCTTTT TTAATTCCTTGCAGATTTTGCTATGTATCTGAGTCTGATGCCATTACTTTATAAAATCATGTCATTATATCTTATTAATA CTTCTTTTAGATAAAAAAAGTTGGATTTTAAAACTGATATGTGATATAACAAAATGGGCTTTACCAAAGACATTGTAGAA TCAATCAACCCCTATATAGAAACAATGCAGCACACGGCTTTTGTATTAGACATCTTACTAGTTGGCTTCTGTGCTGCTGA ATTGTAGGGTTTAGTCTGTGATGGATGAAAAGAAAAAAAATTAATTAGAATAAAATTGTCCTGATATAATATATTGGCTG TGATTTTACATAAGACAAAACATTAATCATTATTTTATATGAATTTTAGATTCGCAATCCTAATCAAATGAGGAAACATA TTAAGACTCCTAAACTAAATTAAATAAGGAAACAGATCAATGTAAATAAGGAAATAAAGAAACCAATCCTAAAGAATAAT CTAAATTACCTTAAACTACTCTAAGGTATGATCAAGGTAATATAAGTTATCTGTTTATACTCTGACATTACCTATCATGC TAAAGTTTAGTTAGTGTTAAACTTAGTTTGGGGAACTAAGCAACATAATAGTGATGAGAAAGGTCACCGAGGATGTTAAT GCTTTGATACCATAATTAAATTTTAGGGTTTTGTCTTTTTTAAGGTATAGGAAGAGGAAAAAAATTAGAATCGAATTGTT CTGATATAACATATTGGGTGTGATCTTACGGAAAACAAAGCCCTTACCTTCATTTATACTAATGGTAGACTCCTAATCCT CAAATGAGTTTCCAACTACAATCTTGGGATTGCAAATTCACCCTAACTGACTCACCTTATCATGTTAAATGGTTTTCCTG TGTTGTCTCATCTTTGTTGAATGTTCAATCTGGCTGGCTGGCTGGCTGCTGATTTGAATGCAAAAAATTGTCGTTTTGAC CTTTTCCTTTTGATTTATCTGCATTGAGTACCGGTTTCAAAGGGAAGAAAAGGGCATAGAAAAATAAATTAACACCAATA TAATCAAATGTTACAAGTGTTCTCTTATGGTCTTGACTCTTGAGTAGAAGGCATGAGGAGTGAGGACATCTATATTTTAG TTTCTTCTGCTCGCATTCAGTTTAAGAATTGGAGGCATTTGCTTACTATATAACCTTGACCAGTAAGTATTCTTTTTTTT TTTTGGAGAAAATTGACCAGTAAGTATTAACAAAATACATTTATATTTTGGTTTGCATGTGCTTGTAAACGATATTTTCT TGTGATCATACTGTTCAGTGTTTCCTTGATGCTTACTTGGCTGTTTGATTTAGAAGCCTTGCTGGGGAAAGATATTTAAG CCCGACGCCTCCTGTTCCCAATCATGCTGAAGACAAGGAAACGGCTGATGTGACGGTTATTTGTCATTCAAATCCAGCTT CATTGAGTTCCACTGAAAGTTCAGAAGGAGGTAAAAAACCTAGCCTATAGGAAATTAAAAATGAAATAAAATCAACCAAC TGGTTTTAGAATTGTAACTTTTGCAGAGTAAAAAGGATGCAGTCGTCATGGATGCATATTTCATAATATTACTTTTATTT TTTGTTTTCCTTTAATTGAGTGCTTCATAAGACCTTCCACATCATTTAAGCAATTTCTTATGTTCTGCGATGAACACAAT CTTCTATGTCTATTTTTAGTTTTTAGTACTTCATTTGAATCTCCTTGTCATTTTATTAATTTGCTTTAGGTTCATCAAGA AGAATTGAAAATCTGCTTGACCTGGATCAAGTTGCTTCCAGTTACCAAATGCTTGGTGAAATATACCAAGAAAGAATGGG GGCAATCAATGCTGACCCTTCCTTACAAAACCATTTTGTGATGGAAAGTCCACTTCTATCTGGAAACTCAAAACAAGTTG ATTTTCATGTTGACCATTGTGCCACTGCCGGTCCAATATTCCAGGGGAGAAATATGACTTCTGAAGGAAGAGATTCTGCT GGTATCGGGATCAGCGAGGACTCAGCATTAGTCCAGGAACAGGCTTCAGATATAGGTGAATTTGTGGAAGTAGCCATGGT AATGCAATATGCAAGTGTCAAGCTATCTTTCCAGGGTGGCCACTGCAAGACACTGGAGCATGATGGAAGTAATGTGTTAA CTGAAGTTGTTGCTGATGATGTTGACAGCAGTAGTAGCCTCCGTGAGAATGCGGAATTGGAGGAGGATGGGGAGGATGAT GAAATGCTTGGTGGCATATTTGCCTTTTCGGAAGAAGGTAAAATATAAATCTGTATCTGCAGCTGCATCTATTCTCTAAA TCTTCTGAGATTGTTCTGATGGTATCATTATGTTATACTTCATTATCAATGAATTCATGATTTACACTTCTTTAGGTTGA TGACCGCCGGAGCGCGCCTATGAAGTCATCTGTGGGAAATATGAAAGCATTGTGAATACTGTGAATAAGAAATGGCATAT GTGCAAAATATTAGATTGATTTGTTTCTTAGTTGGCGATCTCCGTCTCCGTCTCTCTCCCCTGTACATTGTGTAGATTGG AATTCATATTTTCATGGGTTAGCTAACTTTGGGGCCTATGTTTGGAAAACTCTGGCTGAGGGTTTGAGTTTGCATTCACA GTGCTAAGCTGATCATTTATCAAGTTTTTATGTAAATACGAACAGTGCTAAGCTGATCATTTATCAAGTTTCCCTTCAAA TTATATAACAGTTTTTTTTCTTTTTCAATTTGGTTATTAGGACAAGAAAGGAAAGTTGTAAAAGCTCAATTGGAAGGGTG TTCATTGATGTTTCTCCTTCCCTGGATGCTACTTCAGCTGGTTTTTAATTTAGTAAAATGCCCTTGTCAATTTATGTGTC TATGGAATAAGTTTGATGAGGGAGCATCTAAAAGTTGAGGTGCTTAGATCTAACCCAGTGCATACTCAGGTTTAAAGTGA ACTTTAAGATGAGATCTTCTTAAACTAATAAAAAAATTATTAGAATTATTATTTGTTTGATTTAAAATTTATTTTTACTG TCATAATTAATTTTAGTTAGCAATTTCTTTCCAATTGATAATAAAGTCAATATATATAATGTGTGTTTAGATAAACAGTT TAATTAAGCGCTTATTCATAAAATAATTTGGAAATTTTCTTATGCCGCCTTGCTCTAGGACATAAGGGAGCTAATTGGTA GAAGTTTCACCATATGTTGAGAGAGGGGAAATCATGTTGACTTTCTAATTCTAGCTAAGTTTGTGTGTCGCAAGATTAAC ATTTGTCCTTCTTAGATTTTCCCTTGGAGGGTATAAGCCAGCTCTTG 

CDS sequence (LotjaGi1g1v0732300.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAAGAAAGGGAAGGGGAAGAACAACGGCTTGCTGCCGAATTCCTTGAGGATCATCTCTCTTTGCCTCAAAACTGTCTC CACCAACGCCACCACCGTTGCTTCCACCGTACGCTCCGCCGGCGCCTCCGTTGCCGCTTCAATTTCCTCTACTTCCGAGG ATCACAAAGACCAGGTAACCTGGGCTGGTTTTGATAAACTAGAGATTGATCAATCTACCTTCAAACATGTCCTGTTACTT GGTTATCTAAACGGATTTCAAGTTCTTGATGTGGAGGATGCTTCTAGGTTCAGTGAGTTAGTCTCGAAGCGCGACGGTCC GGTTTCTTTCTTACAGATGCAGCCGTTTCCTATAGGATGCAATGGCCAAGAGGAGGGGTTCAGAAAGTCGCATCCGTTGC TGTTGGTTGTTTCTGGCGATGATGCTGGTAATGGAAACCAAAACAGTAACAATTTGAGTGGTTTAGGAAGAGATGGTAAT GTGGAGACTCTACCTGGGAATAGTGGAAACTATGCGACGGCTGTTCGGTTTTACTCCTTGAAGTCTCAATGTTACGTTCA TGTTCTGAGATTCCGAACTTCCGTGTGTATGATCAGATGTAGTTCGCGGATTGTAGCTGTTGGTCTTGCCACCCAAATAT ACTGCTTTGATGCTGCAACCCTTGAGAATAAGTTCAGTGTTCTAACTTACCCTATTCCCCAGCTTGCTGGACAAGGAAAA ACTGGTGTTAATGTTGGTTATGGTCCAATGGCTGTGGGTCCAAGGTGGTTAGCATATGCTTCCAACAGCCTGCTTCCATC AAATTTAGGTTGCTTAAGCCCACAAAACCTTGGTGTTTCTCCTGGAGTTAGTCCATCAACTTCTCCAAGCAATGGTCATT TAGTGGCTCGTTATGCAATGGAGTCCAGTAAACATTTGGCCGCTGGAATAATCAAATACTGTCAAGAGCTGCTTCCTGAT GGTTCTGCTTCTCCAATTCCGTTGAATTCAGGTGGGAAAGTCGGCAGGGTTACAGGAATTGATATGGATAATGCAGGCAT GGTAGTTGTTAAGGATTTTGTTTCCAGAGTTGTCATTTCACAATTCAAAGCTCACTCAAGTCCTATATCTGCACTATGTT TTGACCCTAGTGGGACCCTTCTTGTCACTGCATCAGTCTATGGGAATAGCATCAATATATTCCGGATAATGCCGTCACGC ACATACAAGGGTTCAGGAGTTCCAGGCTACAACTGGAGCTGTTCTCATGTGCATCTTTATAAACTTCATCGTGGAATAAC ACCAGCTATGATTCAGGACATTTGTTTCAGTCATTTTAGTCAGTGGATTGCTATTGTCTCATCCAAAGGAACTTGTCATC TTTTTGTTTTGTCACCCTTTGGAGGTGATACTGGTTTCCAAGTAATTAGTTCTCAGGGTGAAGAACCCTCCCTACTTCCA GTTTTTTCTCTACCATGGTGGTCTACTTCCTCTTCGGTTTCTCATCTGCAATCATTGCCTCCTCCAGCACCTGTTGTCCT TTCTGTGGCTAGCCGGATAAAATATAGCAGTTTTGGGTGGCTTAATTCAGTTAATAATTCTGCTGCTAATGCGACAGGAA AAGTTTTTGTTCCGTCTGGTGCTATTGCTGCCATCTTTCACAATTCCTTATCTCATTCACAACAACCCATTAACTCAAAG GAAAACCCCTTGGAATATATATTGGTATACACACCTTCAGGTCATGTAGTTCAGCATGAACTTCTGCCATCTGTTGGTTC AGAAACAAGTGATAGTGTTTCAACGAACCAGTCAACTTCACTCCTTCTGCAGGAGGATGAGTTCAGAGTCAAAGTTGAAC CTATTCAATGGTGGGACGTATGTAGACGGTCAGAATGGCCAGAAAGAGGGGACCCTTTCAACAATACATTCGATAACGAT AAAGAAGGAGGTATGGAGAAAGTTCAAGAGAAAATGTGTTATGGTAACATCCATCGATTGGATTTTCTGGATATAAGTGA TGGTATCAGGGAAAAGACGGTTAAACCTTCTAGTGGGAATCCCCAAGATAGGTCTAATAGCTATCTGTCTAATGCAGAGG TTCAAGTGAATTTCAGAGGGCTGCCTATATGGCAAAAGTCCAAGATTGGTTTCTATACAATGAGTTGTGTAAGAACTAGT TTTAATGCTGGTGGAGAGTCTGAAATTGAAAAAGTGTCTGCTAAAGAAGTTGAAATAAGACGGAAGGAGCTGCTGCCTGT TTTTGACCATTTTCACAGCATCAGACCAAGCTGGAACGAGAGAAGCCTTGCTGGGGAAAGATATTTAAGCCCGACGCCTC CTGTTCCCAATCATGCTGAAGACAAGGAAACGGCTGATGTGACGGTTATTTGTCATTCAAATCCAGCTTCATTGAGTTCC ACTGAAAGTTCAGAAGGAGGTTCATCAAGAAGAATTGAAAATCTGCTTGACCTGGATCAAGTTGCTTCCAGTTACCAAAT GCTTGGTGAAATATACCAAGAAAGAATGGGGGCAATCAATGCTGACCCTTCCTTACAAAACCATTTTGTGATGGAAAGTC CACTTCTATCTGGAAACTCAAAACAAGTTGATTTTCATGTTGACCATTGTGCCACTGCCGGTCCAATATTCCAGGGGAGA AATATGACTTCTGAAGGAAGAGATTCTGCTGGTATCGGGATCAGCGAGGACTCAGCATTAGTCCAGGAACAGGCTTCAGA TATAGGTGAATTTGTGGAAGTAGCCATGGTAATGCAATATGCAAGTGTCAAGCTATCTTTCCAGGGTGGCCACTGCAAGA CACTGGAGCATGATGGAAGTAATGTGTTAACTGAAGTTGTTGCTGATGATGTTGACAGCAGTAGTAGCCTCCGTGAGAAT GCGGAATTGGAGGAGGATGGGGAGGATGATGAAATGCTTGGTGGCATATTTGCCTTTTCGGAAGAAGGTTGA 

Protein sequence (LotjaGi1g1v0732300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MKKGKGKNNGLLPNSLRIISLCLKTVSTNATTVASTVRSAGASVAASISSTSEDHKDQVTWAGFDKLEIDQSTFKHVLLL GYLNGFQVLDVEDASRFSELVSKRDGPVSFLQMQPFPIGCNGQEEGFRKSHPLLLVVSGDDAGNGNQNSNNLSGLGRDGN VETLPGNSGNYATAVRFYSLKSQCYVHVLRFRTSVCMIRCSSRIVAVGLATQIYCFDAATLENKFSVLTYPIPQLAGQGK TGVNVGYGPMAVGPRWLAYASNSLLPSNLGCLSPQNLGVSPGVSPSTSPSNGHLVARYAMESSKHLAAGIIKYCQELLPD GSASPIPLNSGGKVGRVTGIDMDNAGMVVVKDFVSRVVISQFKAHSSPISALCFDPSGTLLVTASVYGNSINIFRIMPSR TYKGSGVPGYNWSCSHVHLYKLHRGITPAMIQDICFSHFSQWIAIVSSKGTCHLFVLSPFGGDTGFQVISSQGEEPSLLP VFSLPWWSTSSSVSHLQSLPPPAPVVLSVASRIKYSSFGWLNSVNNSAANATGKVFVPSGAIAAIFHNSLSHSQQPINSK ENPLEYILVYTPSGHVVQHELLPSVGSETSDSVSTNQSTSLLLQEDEFRVKVEPIQWWDVCRRSEWPERGDPFNNTFDND KEGGMEKVQEKMCYGNIHRLDFLDISDGIREKTVKPSSGNPQDRSNSYLSNAEVQVNFRGLPIWQKSKIGFYTMSCVRTS FNAGGESEIEKVSAKEVEIRRKELLPVFDHFHSIRPSWNERSLAGERYLSPTPPVPNHAEDKETADVTVICHSNPASLSS TESSEGGSSRRIENLLDLDQVASSYQMLGEIYQERMGAINADPSLQNHFVMESPLLSGNSKQVDFHVDHCATAGPIFQGR NMTSEGRDSAGIGISEDSALVQEQASDIGEFVEVAMVMQYASVKLSFQGGHCKTLEHDGSNVLTEVVADDVDSSSSLREN AELEEDGEDDEMLGGIFAFSEEG 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 981 981 0.0
PANTHER 1 981 981 0.0
SUPERFAMILY 175 455 281 1.23E-15
SMART 182 217 36 420.0
Gene3D 280 512 233 6.9E-10
SMART 355 395 41 1.3E-4
Pfam 360 389 30 0.0082
SMART 413 456 44 3.7
Pfam 502 746 245 4.7E-73
MobiDBLite 953 983 31 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0732300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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