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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0737400 |
Transcript ID | LotjaGi1g1v0737400.1 |
Lotus japonicus genome version | Gifu v1.2 |
Description | BEL1-like homeodomain protein 1; TAIR: AT2G35940.1 BEL1-like homeodomain 1; Swiss-Prot: sp|Q9SJ56|BLH1_ARATH BEL1-like homeodomain protein 1; TrEMBL-Plants: tr|V7D1A0|V7D1A0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0737400 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:131190348..131196411) extracted from Lotus japonicus Gifu genome v1.2.
ATCCAACCACAAAAATTCCCAAATAAGTTGATAAGAAAAAAAAGAAATGGAAAAATTCCGAAAACGACAACAAGATATTT AATGGAGAAAAAATGAGCAATGAGATCCCTCCACCCGCTACTTGTCCATCATCATCATCATCAACCTCTCTTTTTTCTTT TCTTTTCTTTTCATTTTCTCATTAAACAAACAATTAATTGAGCTTTGTGGAAGGAGACGTTTCCTCGTTTTTCAGCTGTT TGTATCTTCTGACACACCTTGATTGCGTTTTCATTATATATATAATTTTTTTTATAGATTTCTCAGCTCAACAGAACTGG TCTCTCTCTCTCTCTTTCTCTCTCGGTCTCTTTTTCCTTGAAAAGTTCTTTGTTGCTCATCAAAGGTAGCATGGATTGCA TCAAATGATTTGAAAACAGAGGGTCAAATCAAAAAGAACTTCCCCTGTATTGATCTATTCACTCACAGGTACTCTTCAAA AAAGCTACTGAAACCAGTTCACTCACAAAATTTTCCCCTACCCAGAATTTCATACATTTAAAAAATCATTTTCTTAATAA GAAAATGGTCATAAATGTGTGGATAATGAGGTGAATAAAGATGTGTATCTTTTTTGCAGAGTCTTTTATAACCATCTCTC TCTCCTCAAACTCTTTTTTATTTTTTTCCTTTTTCAGTTGGTGTGGAATTGCAGAGGATTTTGAGTCTGACACAGAGCTT TCCCTCTTTGGAACTGAAGGGACTGATGAAATCCAAAACATAGATAGATCACGTTGACAGGTGGGTGGGTTTTAATTTGA TGCATCTATCTACATCGATCTTCTTTGATTTGATGTGTTCTTACTTCTTAGCTTCCTTCTATGTATGTTAAGCCATAACT GTAACTCTGCTTTGTCTGTCTCTTTTGTGTCTCTAAATTCTGCTTCTCATAGGTTTTGGGTCACTGTAATTGAAATTCTC CTTTTCTTTGCATTTCTCAGACGATCATGAAGCACGTGCGCACCCCAATTTATGTCACACCAGGTACACTGTTGCTATTT GCTGTGATATCATTTCATAAACTAAGACATAAACAATCTCCTTTCCTTCCTTCTCTCTGTCTCAAAAATTTCTCTTTCTC TCCATAAAACTTCATCTATTAATTCCTTTGGTTCTTATCTTTATTTGGAACAAGTGAAACATGATCTCAAATAATTCAAG ATGCTTAATTAATGTTAATCGGTTTTTCTGATTAATTCATCATTGCTTACTCCTCTAACTTTGTTTATTTCTTCAGGATT CTTTTCAGAAGGCTTCGAGAGCCAGATTAAAGTATCATCAATTATTGGGAGTTGTTTGATGGGTTGATCCGCAAATCATA CCCAAATATTCATCACAAAGCTTAAGGTATATTGTGTTGCTATGATACAAATAATTATTACATTTTTGGGGTTAACACTT ATGTCTGTAAACAATTCTCAAATTGATTTTGAAGCCATAATCAATTCTAATTTTTTTTTTAAGAATTTCAAATTTAATCA CATAAAAAAAAAGTTGATCTAAACACTTTATATATATGTTTGAATTTACCGTGAAAAATCACGCTAAAATTGAAATTAAG GTATACAGCTACAAAAACTAAAATAAAATACTTCTCTCTTATTAGTAATGGAAGTTTTCCACCATGAATTCAACCAACTA CACATGTGTTTGTGAGCTTGTTTTTTTTGGTTTTTTTGATGTGGAGTGTGTTGGATTGGATGTGAACAACTTTGAAAGGC TTGTTGTGTATTTGTAACTAACGTACTAGCTTAGTCTCTTTTTCAGTGAAGTGACAACATATTTTTACCCGAAACCGATG GCGACGTACTATCATGGTAACTCCGAAATCCAATCAGCTGGCGGCGGCGCCGACGGACTCCAAACTCTAGTTCTCATGAA TCCCGGCAGCTACATCCAATACTCAGACAACACGCCGCAGCAACCACCGCAGTCCCACACCGCCGGCAATCTCGTCTTCC TCAACGCCGCCTCTGCCGCAAGCAACAACAACAACAACTCCTTCTCCCCCCACGCGCCGCCCACTCACGGCCAACAATTC GTCGGCATCCCTCTCCAAGCCTCGTCCTCACAAGACCTCAACCACCACCACCAGCAGCACCATCATTCCATCGACGTTCC ATCCTTGCATGGCTTCATGCCCCGCATGCAGTACAATCTCTGGAACACAATTGACGGCAACCCGGCGGCGCGTGACACAC CACGCGCTCAGCAAGGGCTTTCCCTGAGCCTCTCCCCGCAGCAGGTGCAGATGGGGTCTTTTCGGGAGGGACAGGCGCAG GCACTGTCTGGCGGGTCGCCGTCTTCCGCTTCTGGGGTGACTCACAATGGTGCTTCCGGGGTTCAGAGTGTGCTTCTGAG CTCAAAGTATTTGAGAGCAGCGCATGAGCTTCTAGAAGAGGTGGCGAATGTTAACACTGAATTGGCGAAGAAGAGTGGTG GACCGAACAATAGGCTGATCGGAGAGTCGTCGGTGGCAGGTAGTGGAGGTGGGGAAGGGAGTGAGAAGCGTAGCGCTGAG CTTTCAACTGCGGAAAGACAAGAAATTCAGATGAAGAAGGCAAAGTTAATCAGCATGCTTGATGAGGTATTAGTTGTTCA CTTTAATTATAGTTTTTGGCACTTTTTTGTGATTTCTTCTTTTGGTGCTTGTTTTTATTTTAACCATTGATTCTCCTAAT CAAAGACTAAGATTAATTTTAATAAAAATGACTTAAATATTTTTTTTTTATAAGCAAATGACTTAAATATTTGATTTTGA TTTGTATAAAATGTGAGGCTGACTTTAACTTTGACGAAAACACATTTAGCATAAATTGACTAAAAATATATTCAACCTAT TTTAAAGTGTGTGCTGATAGAAATATAAATTCCTCTTGAATCTCTGTGTTTATGGCATTTCACATGAGTGTGTTTGATTT TATGTAGTTCGGTCCCTGGTGTACATTTGTACACATTTCAATGCATAAAAGTTAACGGATGTGAAGGGTTGGATCGGTTA AATGTTTGTTTGCATTCACCTAACATTTATACCAATACAACTTAATTGAGCACCTGCTGGTAATAATCACTTATCATATA GGCGATTATTCTTAAGCTAATTTAAATAGCTTATTGAAATAAGCTCAAAATATCTATTCATAAGTTAATCTGATTTAATT GTGAAAATAAGCTCAAAATAGCTGAAAAGTAGGTAATGAACTATTTTTAATTTTTTATAAATTTACCCAAACACCTACAT AAAAGCACCTAGTTTATAAGATTATAAGATAAGGTCAAATCTTCCAAATGCAATGTGTGGATTTTCCTTAACGCAATTTC AAAGAAAATTCATGCCTTTAAATGGAATGAAGAAAAAGTAATTTTGGATAAATGTAATGAGAATCTAAGGACACACATAA AGTGTTAGCTTAGAGGCTAATTAGACTGTGATGACATTATTCCTAAATTCTACACCCTTCTTTCATTGATTAATGAATGG AAGTCAAGTTGTACTATAGATTATAGAAAGGTAAAGATTACTTTGGTGATTGCTGATCGATTGATATGTTTTTCACATCT TTTTGCTATTGTTGGTTGAAGGTGGAGCAAAGGTACAGACAGTACCACAACCAGATGGAGATTGTGGTTTCATCGTTTGA GCAAGCTGCAGGGATTAGCTCAGCGAGAACTTACACTGCACTTGCACTGCAAACAATCTCCAAGCAGTTCCGGTGTCTGA AAGATGCAATAACAGGCCAAATTCGAGCAGTGAATAAGAACTTGGGAGAAGAGGATTGCTTTGGAGGTAAAATGGAAGGT TCAAGACTCAAATATGTAGACCATCATCTAAGGCAACAGCGAGCTCTCCAACAATTGGGAATGATCCAGCACAATGCTTG GAGACCCCAGAGAGGATTGCCTGAAAGATCTGTTTCTGTTCTTCGCGCTTGGCTCTTTGAACACTTCCTCCACCCGTAAG TACCCTTAATGCATGTTTGGTCTAGCGTTGTCAGAAGTGATTTTAAATAGAATTGACTATGACAAAATTGATTATGTTAA AATGACTTGAAAGTGACGTAATTCATGTTTGTATGTGTTTGCTATAAAAGTGGTTTTCATTTTCATAGAAAAATAAAAGA ATTGTCGTGTGAATAGCTAAAATCACTTTTATCTTAAGTCAAAAGTCTAGTCTTTTTGCCTTGGCTTCAACATAATTTTG TGAGCTTGAAATGCTTCTATGATTTCACCCAAACATGTTCTAATGATGAAAACCACGTTAGTGAAGAATAGAAGTGTTTT TATGGATGAGCAATGTGAAACCAAACATATACATTAGGAATCAATTTTGGTATCCAGAAGCTACTCATATAAGTTTCTCA ATTGATTTTCACTTAAGATTTCCATTATTGTGCTTAACATTCCTAACTCTCCTCCTATTTTAAGTTTTACTATTACCTTA AAGATTGTGGATAGTGTAATATTATGCTGAAATCACTGATTTTGGTTTCAGCTATCCAAAGGATTCGGACAAGCACATGC TTGCAAAACAAACAGGACTTACTAGGAGCCAGGTAAAAAACATTCTTCACTGAATGGTTCTTTACTTCTTCATCTCAATT TTGACAGTCATCATGTTGATAAAGATTTGGACTATAACAGGTTTCAAATTGGTTTATAAATGCTCGAGTTCGGCTTTGGA AGCCAATGGTGGAAGAGATGTACATGGAGGAGATGAAGGAGCATGAGAACAATGGGTCTGAGGATAAATCAAGCAAGAGC AATGAAGATTCTTCAAAGAAAATGGCTGCAGCATCTCAAGAGAAAGGTCCTATCTCTGAAACTGAAGCTGGAAGTTTCAA TTCCAAAGGCCAAGACAATCCTGCAGTTTCAGTTTCTAGACCACCAACATCACCAATGGGAGGAAATGTCAGAAACCAAT CAGGATTCAGCTTCATGGGATCATCAGAACTTGAAGGAATCACACAAGGAAGTCCCAAGAAACAAAGGAACCAGGAAATG ATGCATTCGACAAACAGTGTCCCTTCAATCGACATGGATGTCAAGTCCAATGATGCAAACAATGAGCATCTTTCAATGAA ATTTGGTGATGAGAGGCAGCAAGGCAGAGATGGGTACTCTTTCATGGGAAACCAAACAAACTTCATGGGAGGTTTTGGAC AGTATCCAATTGGTGATATTGGTAGGTTTGATGCTGAGCAATTCACACAAAGGTTTTCAGGTAATGGAGTGTCTCTCACT CTTGGTCTTGACTCATTACCAGGAACTCATCAAACATTTCTCCCAAACCAGAACATTCAACTGGGAAGAGGCCTTGACAT CAGTGAACCGAACGAGTTCGACGCCATGAACACTTCTTCTCCTCACTCTTCAGCTGCTGCTTATGAGACTATCAGCATGC AAAACCCAAAGAGGTTTGCAGCACAATTGTTGCCAGACTTTGTGACATGAATAAGTGTCTGAAGGGTACACTGCACAATT TCTTCTGATTTCCCTGATTATGAGGGGGAGTAATGAAAAATAGTAGTGTAAATAAAGAAGGAATTTTACATTAGTATAGG TTTATACCCTACATAGAACCATTTTAGTTCTTAGATAGTACAGAATTGGAGAGTTTATGGTTGAGGTTGTATATTATTTT TGTCGGTTCTGAAGGTGGGAATGGGATAGAGGGATTGATGTCATAAATATTATTTTGGTAAACATACCAATATATCTTCG ATTGAGAATATGACGTTGTGATATTTTGCAAATCTTCCCTTGAAGAGATCAGGACCAATTTCAAGAATGATCACCCCAGA AAGGTGACTGATTTGTGATAGACACAGAAATGGAGGTAAAATGATTTCTAGATTCTTTTGTATTTACATGGAGGAGGCTA CACTGATTTATCGTTCAACATGATACTGAATTAATTGTAGAGAATAGAGACGGGAAAATTACAATCCATAAAATCAATGA GTAAATACCAATAATGGTAACTATACTTACGTATATTGAGTACGTTAAATATTCAGCATTGTGG
CDS sequence (LotjaGi1g1v0737400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGACGTACTATCATGGTAACTCCGAAATCCAATCAGCTGGCGGCGGCGCCGACGGACTCCAAACTCTAGTTCTCAT GAATCCCGGCAGCTACATCCAATACTCAGACAACACGCCGCAGCAACCACCGCAGTCCCACACCGCCGGCAATCTCGTCT TCCTCAACGCCGCCTCTGCCGCAAGCAACAACAACAACAACTCCTTCTCCCCCCACGCGCCGCCCACTCACGGCCAACAA TTCGTCGGCATCCCTCTCCAAGCCTCGTCCTCACAAGACCTCAACCACCACCACCAGCAGCACCATCATTCCATCGACGT TCCATCCTTGCATGGCTTCATGCCCCGCATGCAGTACAATCTCTGGAACACAATTGACGGCAACCCGGCGGCGCGTGACA CACCACGCGCTCAGCAAGGGCTTTCCCTGAGCCTCTCCCCGCAGCAGGTGCAGATGGGGTCTTTTCGGGAGGGACAGGCG CAGGCACTGTCTGGCGGGTCGCCGTCTTCCGCTTCTGGGGTGACTCACAATGGTGCTTCCGGGGTTCAGAGTGTGCTTCT GAGCTCAAAGTATTTGAGAGCAGCGCATGAGCTTCTAGAAGAGGTGGCGAATGTTAACACTGAATTGGCGAAGAAGAGTG GTGGACCGAACAATAGGCTGATCGGAGAGTCGTCGGTGGCAGGTAGTGGAGGTGGGGAAGGGAGTGAGAAGCGTAGCGCT GAGCTTTCAACTGCGGAAAGACAAGAAATTCAGATGAAGAAGGCAAAGTTAATCAGCATGCTTGATGAGGTGGAGCAAAG GTACAGACAGTACCACAACCAGATGGAGATTGTGGTTTCATCGTTTGAGCAAGCTGCAGGGATTAGCTCAGCGAGAACTT ACACTGCACTTGCACTGCAAACAATCTCCAAGCAGTTCCGGTGTCTGAAAGATGCAATAACAGGCCAAATTCGAGCAGTG AATAAGAACTTGGGAGAAGAGGATTGCTTTGGAGGTAAAATGGAAGGTTCAAGACTCAAATATGTAGACCATCATCTAAG GCAACAGCGAGCTCTCCAACAATTGGGAATGATCCAGCACAATGCTTGGAGACCCCAGAGAGGATTGCCTGAAAGATCTG TTTCTGTTCTTCGCGCTTGGCTCTTTGAACACTTCCTCCACCCCTATCCAAAGGATTCGGACAAGCACATGCTTGCAAAA CAAACAGGACTTACTAGGAGCCAGGTTTCAAATTGGTTTATAAATGCTCGAGTTCGGCTTTGGAAGCCAATGGTGGAAGA GATGTACATGGAGGAGATGAAGGAGCATGAGAACAATGGGTCTGAGGATAAATCAAGCAAGAGCAATGAAGATTCTTCAA AGAAAATGGCTGCAGCATCTCAAGAGAAAGGTCCTATCTCTGAAACTGAAGCTGGAAGTTTCAATTCCAAAGGCCAAGAC AATCCTGCAGTTTCAGTTTCTAGACCACCAACATCACCAATGGGAGGAAATGTCAGAAACCAATCAGGATTCAGCTTCAT GGGATCATCAGAACTTGAAGGAATCACACAAGGAAGTCCCAAGAAACAAAGGAACCAGGAAATGATGCATTCGACAAACA GTGTCCCTTCAATCGACATGGATGTCAAGTCCAATGATGCAAACAATGAGCATCTTTCAATGAAATTTGGTGATGAGAGG CAGCAAGGCAGAGATGGGTACTCTTTCATGGGAAACCAAACAAACTTCATGGGAGGTTTTGGACAGTATCCAATTGGTGA TATTGGTAGGTTTGATGCTGAGCAATTCACACAAAGGTTTTCAGGTAATGGAGTGTCTCTCACTCTTGGTCTTGACTCAT TACCAGGAACTCATCAAACATTTCTCCCAAACCAGAACATTCAACTGGGAAGAGGCCTTGACATCAGTGAACCGAACGAG TTCGACGCCATGAACACTTCTTCTCCTCACTCTTCAGCTGCTGCTTATGAGACTATCAGCATGCAAAACCCAAAGAGGTT TGCAGCACAATTGTTGCCAGACTTTGTGACATGA
Protein sequence (LotjaGi1g1v0737400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATYYHGNSEIQSAGGGADGLQTLVLMNPGSYIQYSDNTPQQPPQSHTAGNLVFLNAASAASNNNNNSFSPHAPPTHGQQ FVGIPLQASSSQDLNHHHQQHHHSIDVPSLHGFMPRMQYNLWNTIDGNPAARDTPRAQQGLSLSLSPQQVQMGSFREGQA QALSGGSPSSASGVTHNGASGVQSVLLSSKYLRAAHELLEEVANVNTELAKKSGGPNNRLIGESSVAGSGGGEGSEKRSA ELSTAERQEIQMKKAKLISMLDEVEQRYRQYHNQMEIVVSSFEQAAGISSARTYTALALQTISKQFRCLKDAITGQIRAV NKNLGEEDCFGGKMEGSRLKYVDHHLRQQRALQQLGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAK QTGLTRSQVSNWFINARVRLWKPMVEEMYMEEMKEHENNGSEDKSSKSNEDSSKKMAAASQEKGPISETEAGSFNSKGQD NPAVSVSRPPTSPMGGNVRNQSGFSFMGSSELEGITQGSPKKQRNQEMMHSTNSVPSIDMDVKSNDANNEHLSMKFGDER QQGRDGYSFMGNQTNFMGGFGQYPIGDIGRFDAEQFTQRFSGNGVSLTLGLDSLPGTHQTFLPNQNIQLGRGLDISEPNE FDAMNTSSPHSSAAAYETISMQNPKRFAAQLLPDFVT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 670 | 670 | 1.3E-296 | – | |
PANTHER | 1 | 670 | 670 | 1.3E-296 | – | |
MobiDBLite | 157 | 176 | 20 | - | – | |
SMART | 180 | 315 | 136 | 1.1E-59 | ||
Pfam | 185 | 314 | 130 | 2.1E-46 | ||
MobiDBLite | 210 | 224 | 15 | - | – | |
MobiDBLite | 210 | 245 | 36 | - | – | |
Coils | 247 | 274 | 28 | - | – | |
Gene3D | 359 | 437 | 79 | 7.9E-29 | – | |
ProSiteProfiles | 360 | 423 | 64 | 12.195 | ||
CDD | 363 | 423 | 61 | 2.50485E-12 | ||
SMART | 363 | 427 | 65 | 5.3E-9 | ||
SUPERFAMILY | 364 | 430 | 67 | 5.99E-17 | ||
Pfam | 380 | 419 | 40 | 6.2E-18 | ||
MobiDBLite | 433 | 540 | 108 | - | – | |
MobiDBLite | 433 | 451 | 19 | - | – | |
MobiDBLite | 466 | 540 | 75 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi1g1v0737400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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