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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0743100 |
| Transcript ID | LotjaGi1g1v0743100.2 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein phosphatase; TAIR: AT3G58500.1 protein phosphatase 2A-4; Swiss-Prot: sp|Q06009|PP2A_MEDSA Serine/threonine-protein phosphatase PP2A catalytic subunit; TrEMBL-Plants: tr|G8A1A9|G8A1A9_MEDTR Serine/threonine-protein phosphatase; Found in the gene: LotjaGi1g1v0743100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:131667604..131672536) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGTGCCAACTCGTTGCCATCCGAGTCCACTCACGATCTCGACGAGCAGATCTCTCAGCTCATGCAGTGCAAGCCACT CTCCGAGCAACAGGTTCCCTTCAATTTCCCCTCTATTTCTCGAGATCTTCTTCCTCTGCAAGCCACGTCTCGATTTTGCC TCGATTTGTTTAGTTATCAGTTTTTCCTTCTTTATCGCGCCCAATTTGGTTGATTTCGTGAAATGGAGACCACGATGCCA TGATTTTTTTGCTTTTTTGACCTGATTTGAGCCAATTAGGATGAGATAAATCAAATTTCTTCGCTGAAAAGCGATTTTTA GCTGTGAATTTTGCTTTCTGGTAGTTTGTGTGCGGAGATGTTGTTTTGCTGTGTGGAGGTTTGACATCTGAAGACATAGA TTTTCTGTATTTGAAATGTTATGACACTGGAATTTGGATATTTCTTAAACTGTTGCTAGTTCCCTAAGATTTTTGGGGAG ATTAAATGTTTCATTGTGTATAGTAACGTTATGGTGACTGGTGAGATTTATATATAGGAAGTCATGACTTTGTTTGGCAT CTTAATGCACTAGATGTTGGCTTACTATGAGTTATGTTTCTAACCTGTATGTTGAAGAACACTGTGATAGTGTGGTTAGC TGGATGTTTTTGAAGAATGATCAGATTAGATGAAAGGGTGCTGGTGGTGAATACATTCTTGTTGCTATTTTAGTGGTTTT ATGTAGTTGTTGCTCTTATTGCAGAAATATTGTCGTCTTTATTTTTTCCGGGCAAAACAACCCTTAGATAATGAAGTTTG TTTGCTTACACGTTACAATTTACTGAGATGGGAGATGTATGGATATCATTGCTATCTGAGTGATATATCTTTGGGGAGTT ATGTCCGTCATTTACTCCTTAGTCTTTTTGGTATTGTTATTCTAGGGAATATAAATATAAAAATAAACCAATCATCTTGT TATCTGCTTTATCTGTAGGTAAAAGAATTATGTGAGAAGGCTAAGGAGATTTTAATGGAGGAAAGCAATGTCCAGGTGTG ACCCTTTCTTCATGCCTTAATTTGCAATTAGGTGCTTTTCTGTTTCTCCAAACATTGTTCAGTTTCCCCCCTCATATCTG GGCTCATTTGTCTGATATCATTGCTTTTAATACCTGTTTTGTGGAAGAAGGAATGTAATTCATTTTCTCTCACATATAAT ACTTAATTTGCTTGTGGCCTTGTGCTTCATAGCTGTATGCGAACAGCACAATCCTGTATTTCAATGCACCTTTTAATTGC TAGTTTTTCATCTTAAAGAAATAAACATTAATTTTTTGGTTTCTCTCTGTACCACAGCCTGTGAAAAGCCCTGTCACAAT TTGTGGTGATATTCATGGCCAGTTTCATGATCTTGCTGAACTATTTCGAATTGGAGGAAAGGTATCATTTCTGACTATGA ATCTGTTTTGTATTCAATATTCATGACCTGTCAAATAACTTTTGAAGATTGAAGTGCATGGGGTATAGAGGAGTGAATTG TATAGTGCAGGAACAACTTGCTGACTTCACCATGAGCCTATTTTTTTGTTAAAGCTCCTTATTATTTTAATTGTGCAAAA TGTATTATGATTAGATTATGATTTATCATTAGTTTCTGGATATTATATTTTCTAATCATTGATATCTAAATTAACCTGTT TTGTTTACAGTGTCCAGATACTAACTACTTATTTATGGGTGATTATGTGGACCGGGGTTATTATTCAGTTGAGACTGTGA CTGTAAGTACAACCGAGACAAACTTATATGATGTTTTTCCTCAGCTTTTAGTAGTTATTTTTTGAAGATTCATAGTTTTT ATATGGTATTCATGCATTAGGATGACAAAAATCAGGTGGAAAATAGTTCTTAGTGGTAATTGATGAAGTTTTCGTGAGCT TTGAGATTCATTTCTGTCGTCTTTTCATATTAGGATGGAACTGAAAATGTAACTGCCTTCAAATTATCATATTCATAACA TAAGCACATATAATTAAGGGAATAGCTTTAGAACGTAGTGCAGAGTTTTTTTAATGTGTCAAGATATAGAAGGCTCAAAG AGATGAAAGGTGGATTGCATGTTCATAGTAATTTATATTATATCGCGATCATTTGTATAATTAAGTTTATCGGCATAAAC TTTTCAACTTGTGTATATCAGATATTGGTAGTATACAACTTTGGGCGTTGTGGAGTGAACTGATGGTGAAGTAACATTGA TATTTACTTTGGTTAATATCTTTGTTTCTTAATTTTTCTTTACTTAACAGTTTTGTATGATAGACACACTGATTAGTTAT TCTATCCAGCTCCTTGTGGCACTGAAAGTGCGGTATCATCAGCGAATTACTATTCTTAGGGGAAACCATGAAAGCCGTCA GGTTTGAGTTTTCACTCTTGGTTCAAAATTATAAATTTCTTGTTTGCAGAGGTCCGCAATGGCATTTATTTCTGAACAAA TATTACCCATTAGTCTTGAATGGCGTTTTAGTTGTATAATATATTGTTAGTGCTAAAAGTTTTTGGCTTTGGTTTGAAGA CTTTACAGAGAGCTAATTGTTCCTTAATCATCTTTCTGTTATGCAGATTACTCAAGTATATGGATTTTACGATGAATGCT TAAGAAAGTGAGTTTTCAACACCTTCTTTTAGAGTTCCTATGGAGCAAATCATAAGGTTTTCTGTCTAGAGATATTTTTG CAGTGTACAATGTTGTAGTATTACTGAGGTGGAGTCGCGAACTTCTTTTTAAATGTGAACTGCAGCAAAATCCCTTGCAA CACGCCCTTTTAGAAATTAACTCTTAATGTTGATTGCATAGTTTCTTGGTTAGTTGTTACTTTTATTTTATTTACTAAGC TGGAGTTCTGGGATGAACATCTGAATTTTGCTGATGATTAGGTCTGTCATTTAGCCTTTTGATTAAGTGGCAATATGACG TCTGATTGTATTGGTAATGATGTGACGGAAGTTGGATGGCATAAAATATCTTACTGATGATGTGTAAATCTGTAGATGCC CCTCTGTCCCAAAAAATAAAGAATATTGAATTCTATGAAATGTGGAAATTTTGGTCTGAATTGAAGAACAAAATAAGGAT GTTTGGTTTGATCCATTATTGGAGACTAAAACACCTAGACAAACTGATTACTTCAGGATGCATAAATATTTTGTAAATTG ACATGGAAGTGAGTAATGCTTTCAAAAGGGATATCGTTCAAAATCACAATAATAAGAAAATTCTGCTTTTGAGGGGAAAT ATTAAATCCTTTCCCAGGCTCAGTTTTATGAGTTCATGTTTTAATCAGTTGATATGTAGATTTTAGCTTATTTAGTTTGC TTTCTTGCGCCTAAACAATCCTATTATTTTTTATCTCCAACTTACATGATAATTTGTTTCCACTTTTTTGCAGGTATGGT AATGCTAATGTTTGGAAGACCTTTACAGACCTCTTTGATTTTTTTCCATTGACTGCATTGGTTAGTACTCCCCCCAATTT ATGCATTATGTTTGTATGTTGGAGTGTGTCTTGTTTGCATATGTAAGCTATTATGTAAATGGAAAATTTGGAAGATGTAG CAAATTTTTAGAATAAATTCTCTTTTTGCAATGAGTTGAAAATATCAGTATTTACCTTTTGTTTAATAGCTTCAAAGAAC TAACATGTGGCTCTTATCTTTTTCACATGGTATATGATCTTTTTCTCAAGTTAAAATCAACAGAATGCAATTTGTCTAAT GGCTTGTCTGATGAGCTCTGCCCATTTTGCAAATCGCAAACTAGCCTAAATTTCTGTTATATTCAGAAAATAAAATGCTT CAACTTTTGTGTAGATTGATGATAGGCTAAGATATAATGAAGTGGTAAGTCTTAGCACACCCAGATAGTTTGCTTTAGCA TGGATATGATTGTATTATAATATATTTATAGGTATTAAAATGTTATTACATTTCTGCCATAAGTTCTATAGTTTCTAAAA CGAGAATTTGTCTTTTGTGGCTCGTTCAATTGAGATTAATTGTCTTCATGATGCTTCAAGATTTTCGGTTGACTGTTGAA CAACCTTCATCTGTTTGACATAATAAATTGGAAACTGTAGTTTAAGTTTTTTTTTGCAATCTCTTGATTACTTGGCCTCT CAAATAGCATAGTCCTTTCCAGGTAGAATCAGAAATATTCTGTTTGCACGGTGGCCTGTCACCTTCAATTGAGACCCTTG ATAACATAAGAAACTTCGACCGTGTTCAAGAGGTTCCTCATGAAGGGCCCATGTGTGATCTATTGTGGTCTGACCCGGAT GACAGATGTGGCTGGGGGATATCTCCTCGTGGTGCTGGATATACTTTTGGCCAGGTAAGCATAGCTAATATTTCTTGACT CCCTACATAATTGAATATGTATTTTTTAAGCATTAGGAGACCTATTGTTGTTTTTTATTATTTTGCTAACTCCATTCACA TTCTTTCAGGATATATCTGAACAATTCAATCACACAAACAGCCTTAAGTTGATTGCGAGAGCTCATCAGCTGGTTATGGA TGGATTTAACTGGGCTCATGTAAATGTCCTTCTTGAGGAATGATCTTCTCTTTTCATTTGCTCACATTACAATTATAGGG GTAAAGTTTTGGATATGTGCATTGTTTTGTTGAAACAGGAACAAAAGGTGGTTACCATTTTTAGTGCACCTAACTACTGT TACCGATGTGGGAACATGGCTTCCATATTGGAGGTTGATGATTGCAAGGGACACACATTTATCCAGGTCTGTTTCACTGC CATTCAACATAATTTGCTCGTACGGTTTGGTAAAATAGTCTGTTTAAATTTGAAATACTTCATGCAGTTTGAACCTGCTC CAAGGAGAGGAGAACCTGACGTGACCCGAAGAACGCCTGATTACTTCCTGTGA
CDS sequence (LotjaGi1g1v0743100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGATGTATGGGTAAAAGAATTATGTGAGAAGGCTAAGGAGATTTTAATGGAGGAAAGCAATGTCCAGCCTGTGAA AAGCCCTGTCACAATTTGTGGTGATATTCATGGCCAGTTTCATGATCTTGCTGAACTATTTCGAATTGGAGGAAAGTGTC CAGATACTAACTACTTATTTATGGGTGATTATGTGGACCGGGGTTATTATTCAGTTGAGACTGTGACTCTCCTTGTGGCA CTGAAAGTGCGGTATCATCAGCGAATTACTATTCTTAGGGGAAACCATGAAAGCCGTCAGATTACTCAAGTATATGGATT TTACGATGAATGCTTAAGAAAGTATGGTAATGCTAATGTTTGGAAGACCTTTACAGACCTCTTTGATTTTTTTCCATTGA CTGCATTGGTAGAATCAGAAATATTCTGTTTGCACGGTGGCCTGTCACCTTCAATTGAGACCCTTGATAACATAAGAAAC TTCGACCGTGTTCAAGAGGTTCCTCATGAAGGGCCCATGTGTGATCTATTGTGGTCTGACCCGGATGACAGATGTGGCTG GGGGATATCTCCTCGTGGTGCTGGATATACTTTTGGCCAGGATATATCTGAACAATTCAATCACACAAACAGCCTTAAGT TGATTGCGAGAGCTCATCAGCTGGTTATGGATGGATTTAACTGGGCTCATGTAAGAACAAAAGGTGGTTACCATTTTTAG
Protein sequence (LotjaGi1g1v0743100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGDVWVKELCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVA LKVRYHQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKTFTDLFDFFPLTALVESEIFCLHGGLSPSIETLDNIRN FDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNSLKLIARAHQLVMDGFNWAHVRTKGGYHF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 1 | 234 | 234 | 9.2E-114 | ||
| Gene3D | 3 | 237 | 235 | 9.9E-109 | ||
| PANTHER | 6 | 231 | 226 | 5.5E-167 | – | |
| SUPERFAMILY | 6 | 233 | 228 | 2.37E-92 | – | |
| CDD | 6 | 230 | 225 | 0.0 | – | |
| PANTHER | 6 | 231 | 226 | 5.5E-167 | – | |
| Pfam | 29 | 220 | 192 | 3.8E-36 | ||
| PRINTS | 29 | 56 | 28 | 6.2E-80 | ||
| PRINTS | 58 | 85 | 28 | 6.2E-80 | ||
| PRINTS | 91 | 115 | 25 | 6.2E-80 | ||
| ProSitePatterns | 92 | 97 | 6 | - | ||
| PRINTS | 126 | 152 | 27 | 6.2E-80 | ||
| PRINTS | 155 | 182 | 28 | 6.2E-80 | ||
| PRINTS | 211 | 231 | 21 | 6.2E-80 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi1g1v0743100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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