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LotjaGi1g1v0755400.2

Overview

Field Value
Gene ID LotjaGi1g1v0755400
Transcript ID LotjaGi1g1v0755400.2
Related isoforms 5
Lotus japonicus genome version Gifu v1.2
Description Receptor-like kinase; TAIR: AT2G47060.4 Protein kinase superfamily protein; Swiss-Prot: sp|O80719|Y2706_ARATH Probable receptor-like protein kinase At2g47060; TrEMBL-Plants: tr|G7IBS1|G7IBS1_MEDTR Receptor-like kinase; Found in the gene: LotjaGi1g1v0755400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:132859079..132860896) extracted from Lotus japonicus Gifu genome v1.2.

GAGGTTTTTGGTTCTTCAAATCCCATGAACCACTTGATTTTTGAACTTTCAGGTTTCAATGGTTTCACGACTGAAGCATG ACAATTTTGTCCAATTGCTTGGTTATTGTGTTGACGGAAACTCTCGAATTCTTGTTTATGAGTTTGCATCTAATGGGTCT CTTCATGATATTTTACATGGTATGTGGTTTTGCTTTGGAAAATTGTTGGCATCTATGGACATTTGTCAAGTTCTTTTTCA ATATTAAAGGAATTGAGAAAAATTTGGATTTCGACATCAGTATTGTTTTTAGTTCCATGAGAAGCAATGGTACTACTTGA AAGATATATTATTATGTTCCTGTTTTTAGCATACATTGTTGTGTTTCTTATTAGTGTCCTTTACATACAGGCAGAAAAGG TGTTAAAGGAGCACAGCCTGGTCCTGTTCTGACATGGGCACAGCGAGTTAAAATTGCTGTAGGGGCTGCAAAAGGGCTTG AGTACTTGCACGAGAAGGCTGATCCCCACATTATCCACCGGGACATCAAGTCAAGCAACGTGCTAATCTTTGATGATGAT GTTGCTAAAATTGCAGATTTTGATTTGTCAAATCAGGCTCCTGACATGGCAGCACGTCTTCATTCCACCCGTGTCCTTGG AACCTTCGGTTATCATGCACCTGAGTAAGATATTATATCAAATTTTCAAGATGCATATTGTATAACATGCTTTATTGTAG CCCTATTAGTTATAGGCTTATAGCATATTACTACTAAACTTTCAGCACAATTGCCGAAGAATTATTGGAGCAGTAATACA AAATTTTACTTCTTCCAAAATTCACTTCAAAGGTGTTACCAACTTGCCAATTTGAATAGCTTTTTTGGTTTATATCTTTG TTGCAATCCAATGATCTGTCTAATATTATGAATGCAGATATGCAATGACTGGGCAATTGAATGCTAAGAGTGACGTATAC AGCTTTGGTGTTGTCCTTCTGGAACTTTTGACTGGAAGGAAGCCTGTTGATCATACACTACCACGTGGGCAGCAGAGCCT GGTTACTTGGGTAAATGCAAACCTCATTATTGTGATCTAATTTCATGTTGTCAGGAAATGTAAAATGCAGGCCAGCGAGC TGATGACAGTAATTGATGTGTTTCAGGCTACACCAAAACTAAGTGAGGATAAAGTCAGACAGTGTGTAGATGCAAGACTA GGAGGAGAATACCCACCCAAAGCTGTTGCAAAGGTGCTCACTGTTTCTTAGTATATTTTTCTTCCTTTATGTGGTTATTA TGCCATTTTCTTTGCCGAGGTGTTGTAGACTGTTTGCTATGGATTAGCAAACTAATCTAACATAGCTTACAAGAGATACT TGCAGAATTCTTATATCTTGTGTATTAGTAATGCTATGCTTGAGACTAAAAGTTGAACCTAACACTTTGTTGAATCATTT CCTTTATGGAGAAAATTCAGTGAATAATTTTTAATTAGTTTAACAATAGGAATGGAAGGGCTGTCTCTATAGTTTCGTCT TAGTTTCAGAAATTATGATCAAGCCAGCAGGTATCATAAGAGTCAGAAAATACTTAAAATGTAGAAACACTTTTATGTGG GTTACCGGCAACCAGGACCTAGAGATAGACTATTTACATAATTGAGACCAATTTTAATTTATAACAGCATGATACTTGAT TAATTACAGTTGGCTGCCGTTGCTGCACTGTGCGTGCAATATGAAGCTGATTTCAGACCAAACATGAGCATTGTAGTCAA GGCTCTTCAGCCTTTGTTGAATGCAAGGCATGGACCTGCTGGTGACGCACCAAACTAA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0755400.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTTTCACGACTGAAGCATGACAATTTTGTCCAATTGCTTGGTTATTGTGTTGACGGAAACTCTCGAATTCTTGTTTA TGAGTTTGCATCTAATGGGTCTCTTCATGATATTTTACATGGCAGAAAAGGTGTTAAAGGAGCACAGCCTGGTCCTGTTC TGACATGGGCACAGCGAGTTAAAATTGCTGTAGGGGCTGCAAAAGGGCTTGAGTACTTGCACGAGAAGGCTGATCCCCAC ATTATCCACCGGGACATCAAGTCAAGCAACGTGCTAATCTTTGATGATGATGTTGCTAAAATTGCAGATTTTGATTTGTC AAATCAGGCTCCTGACATGGCAGCACGTCTTCATTCCACCCGTGTCCTTGGAACCTTCGGTTATCATGCACCTGAATATG CAATGACTGGGCAATTGAATGCTAAGAGTGACGTATACAGCTTTGGTGTTGTCCTTCTGGAACTTTTGACTGGAAGGAAG CCTGTTGATCATACACTACCACGTGGGCAGCAGAGCCTGGTTACTTGGGCTACACCAAAACTAAGTGAGGATAAAGTCAG ACAGTGTGTAGATGCAAGACTAGGAGGAGAATACCCACCCAAAGCTGTTGCAAAGTTGGCTGCCGTTGCTGCACTGTGCG TGCAATATGAAGCTGATTTCAGACCAAACATGAGCATTGTAGTCAAGGCTCTTCAGCCTTTGTTGAATGCAAGGCATGGA CCTGCTGGTGACGCACCAAACTAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0755400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVSRLKHDNFVQLLGYCVDGNSRILVYEFASNGSLHDILHGRKGVKGAQPGPVLTWAQRVKIAVGAAKGLEYLHEKADPH IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRK PVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGEYPPKAVAKLAAVAALCVQYEADFRPNMSIVVKALQPLLNARHG PAGDAPN
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.30.200.20
1 30 30 8.5E-8 –
SMART
SM00220
1 235 235 7.2E-11
IPR000719
ProSiteProfiles
PS50011
1 235 235 31.566
IPR000719
PIRSF
PIRSF000654
1 239 239 3.5E-29 –
PANTHER
PTHR27001
1 242 242 6.2E-116 –
PANTHER
PTHR27001:SF786
1 242 242 6.2E-116 –
Pfam
PF07714
2 231 230 7.6E-39
IPR001245
SUPERFAMILY
SSF56112
2 231 230 2.16E-61
IPR011009
Gene3D
G3DSA:1.10.510.10
31 240 210 6.1E-60 –
ProSitePatterns
PS00108
81 93 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0755400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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