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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0760900 |
Transcript ID | LotjaGi1g1v0760900.1 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | DnaJ; TAIR: AT4G02100.1 Heat shock protein DnaJ with tetratricopeptide repeat-containing protein; Swiss-Prot: sp|Q54IP0|DNJC7_DICDI DnaJ homolog subfamily C member 7 homolog; TrEMBL-Plants: tr|I1JQQ9|I1JQQ9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0760900 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:133401153..133405052) extracted from Lotus japonicus Gifu genome v1.2.
TAGATAGATAGGTTATGTGTGTAAATGACAGAGAAAGAATCTCAAGGGTGTGTGTTGCCAGCTATGAATTTGAAGGATGA AAGCTTTCTCTGAGGTCAAAGCTGTCAAAAATTCTCTTTCATACCTTTTATTTTATTTAATTCAATTCATTTTTCTTTAT CACCATACATACCCTTATAATTTACATTAACACATGAATTCCACACACTAAATACTGATATAAAAACCATAGTTTGCTCC TCATTTTCCTATTCTCATTTTCTCTCTCAAACCTCAAACCTCAAACCCTGTTCTGTTCTCTCTTCCTGGTTCTCTCACCC TTATATATTCCTCTCCCTTCATTATTAGAGCACAGAAATTATGTGCCTGCTTTCATTATAGGGGGAGAGGGAGAAACAAG GGAGAGAAACCTGAAAATTTTCAACAAATTTCACACTCCCTGATTCAATCTGCAATAACCAAAAAAAAAAATCAACAAAA ATGGCAGTCACTGCTCACTCTCTATCTGCTACAGAGAAGAAGCACTGGTGGCTCACAAACAGAAAGGTAAAGTTATAGCA CAGTACCTTTTAATCCATGATCTTAAAAAAAAAATCTGCAATTGTTTCAACTTTCAAGTAATGGTTCTGTGAAACAATTG ATGTTTTTTTTTGTGTTTGATTCATGTTTTTTTTTGTGACATTTTGCAGATTGTTGAGAAATACATCAAAGATGCTAGGA GTTTGATTGCAACACAAGAACAGAGCGAGATCGCTTCAGCTCTGAACCTTCTTGACGCAGCTTTGGCGATCTCTCCGCGG TTGGACCAGGCTCTTGAGCTGAGAGCGAGGTCGCTGTTGTATCTGCGGCGGTTCAAGGAGGTTGCTGACATGCTTCAGGA CTACATTCCTAGCCTGAGAATGGCGAATGAGGATCCTGTTTCAGTCTCCTCCTCTTCTGATTGCTCTTCCCAGAATCTTT CCAGGGAGGGAGTGAAGCTTCTCTCCTCCTCCCCTGACTCGCCGGTCCGGTACCAGAGTTTCAAGTGCTTCTCTGTCTCG GACCTCAAGAAGAAGGTGATGGCAGGGCTTTGTAAAAGTTGTGAAAAGGAAGGGCAATGGAGGTAAATTCACATACCCTT CACAGTTCACACCTGCATTCACATTATTCTGTTTCATTGGTTTTGACATTGCAACTTTTTTATTTATTGTTATTAAATAG GAATTTTAATTTTCTTCATTTTGGTTCAACTTTCATTAAATGAGTTTTAATTTATTGAATTTCGATATCAGATCGATCTA GGAGTAAAAGTAAGCTGCAAGCAACCTCAGATGGGTAGTAAATGCTAGTGCCTGCCATTCACCCAAATGGTTCCCAGCTT TTATTCTAAAAAACCCAATCAAATTTAATGCACATTTAATTTTTTTACTGTTATGATTTTCTCTATCACATACATGTGCA TACACTACATGTGCACACACTATTGTTTTCTAGTACTATCAAATTAGATTAGTTAGTCAATAATTCAACCTTATGTTTAT TTAATTTTGGAATCTCATAAAGTTTGTACAATCATCCAGTACTACCTTATGCTTCTAGTACTAATAATGTGCTACAGTGA AATGGGTTAGTGATAATAATAAGAGAATACTAGTAGGATGAAATATGAATGAAATTGATGAATATTAAACGTAATGTGTT AAAATTATGTTTCTCTTATCCACGTTAAATTAAACGTATTAAATTCTAGGTTCTCTGGTAATGCAAATACGTTAAATCAT GTTTGCGCCAAACCAAACATGTACTCTTGTTAATTTGACTAAGTTTTGTTTATGCAGATACTTGGTTTTGGGTGAAGCAT GCTGCCATTTAGGCCTAATGGAAGATGCAATGGTTCTTCTCCAAACAGGGAAACGCCTTGCCAGCGCGGCGTTTCGGCGA GAAAGCGTGTGTTGGTCCGATGACAGCTTTTCACTCTCCGGCATTCCTTTTGCCGGCGACGCCACAAACCCACCACCCAC GTCTCCTCCCAAAGCCCCTCTCACGGATTCCACCGAGAGCGTCACCCAGCTCCTCACCCACATCAAGTTCCTCCTCCGCC GCCGTGCAGCCGCACTCGCTGCCCTTGATGCCGGCCTCTACCCGGAAGCCATCCGTCACTTCTCAAAAATTGTCGATGGC CGCCGCGCCGCCCCACAAGGGTTCCTAGCAGAATGCTACATGCACAGAGCCTCCGCGCACCGTTCCGCCGGTCGAATCGC AGAGTCCATCGCCGACTGCAACCGCACCTTAGCCCTCGACCCAACCTGCATCCAAGCCCTCGAAACCAGAGCATCACTCT TCGAAACAATTCGCTGCTTACCAGATTCTCTTCACGATCTTGAACACCTGAAGCTTCTCTACAACTCCATCCTGCGTGAT CGCAAGCTTCCCGGCCCGGCGTGGAAGCGCCACAACGTGCGTTACAGGGAGATTCCGGGGAAACTCTGCACCCTCACCGC GAAGAGTCAAGAACTGAAACAGAGGCTGGCTTCAGGGGAGACTAGTAGCGTTGATTACTACGCTCTGATCGGAGTTCGAC GTGGTTGTTCTCGATCGGAGTTGGAGAGGGCTCATCTCTTGCTGTGTCTCCGGCACAAGCCTGATAGAGCAACAAGCTTC ATCGATAGGTGCGAGCTTGCAGATGAACGTGATGTTGATTCAGTGAAGGAGAGAGCGAAGATGTCTGCATTGTTGTTGTA TAGGTTGGTTCAGAAGGGTTACACGAGCGTGATGGGTACAATATTGGATGAAGAAGCTGCTGAGAAACAGAGGAAGAAAG CTGCATTGCAAGCTGCTGCGGCGGCGAATCAAGTTAAGATCAAAGCAGTGGCGAGTCATGAACCTGAGATGAACAAGCCA GATAGTAGGAGCTGCAATGTTGTGGAAGACAAGTCTACATTGGTGTCTTCTTCCACTGTGAATCCGGCGGTGTTTCAGGG TGTTTTCTGCCGTGATCTTGCGGTGGTCGGAAACTTGCTTTCTCAGGCAAGGTTTAATCAGCCAATTCCGGTGAAGTATG AAGCATTGAGCTGCTGATTTGGAATTAATTTCATCAAAAATGGAAAATTGGGGTATGTTGGAGATGTTACCGGCAGAGGG AATCTCAGGTTTCATTGTACAAATGCAGAAAAAAAAAAGTTGGGATGCCGGAAAATTTTGTCACCTTTATCTTTTTCTCT TTGATTAGCTATCTTTCTATCTATCAGATGTACAGATTATCAGTACTCAACACTCTACTTTTGGTTGAACCATCCCTTCA ATTTCTCTTTAAAATTTCATATCTTAAGTACTTAATGGTTTTGATTAACAGTAATTACCTGCTTTTGATTACAATAGATA TAAAATAAAACTATTGAATAGATAACTCTTTTACTGTGTGTATACTGTGTAGCTCTGAAAAGGAATTGAAGGTGATGGTG TTGGCTTTTTCCCATCTTTATCTGTTGTCTAATTATGTGAAGAAACTGAGCAAATGATGAATGGATATGGGGTAAAAGCA CAATGTTATGGGGGGTAAAAGCACAGTTTCGAAAATCATCATTAGTTCTTGTTGAGGCTGTCATGTCTTGAAAGGATAGA TTTTTTGAACGTGGTCATATTCCAGTAGTGGACACTGTTTTGAAGTGTAAAAAGGGTTGTCAGGTTTTTGTTTTCCTCTT CAGATTTCTGCACGTACAAAGGGTCTAATGTGCACTCGGTACAAGACAACAAAGGATTAGAATTAGATAGAAAATGTGAT TAACTTTCCTTTGCTTTGCACATGGGTTCTATACTGCAATTTTGTGCTCATTGATAATTAGTTGCTATCTTTCATGTTAA ACCAAGTGTTAAAGTGCGGGTTAGAGCTTGTAATAGTAGTGAATTTGAAGAGAATGGTAG
CDS sequence (LotjaGi1g1v0760900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGTCACTGCTCACTCTCTATCTGCTACAGAGAAGAAGCACTGGTGGCTCACAAACAGAAAGATTGTTGAGAAATA CATCAAAGATGCTAGGAGTTTGATTGCAACACAAGAACAGAGCGAGATCGCTTCAGCTCTGAACCTTCTTGACGCAGCTT TGGCGATCTCTCCGCGGTTGGACCAGGCTCTTGAGCTGAGAGCGAGGTCGCTGTTGTATCTGCGGCGGTTCAAGGAGGTT GCTGACATGCTTCAGGACTACATTCCTAGCCTGAGAATGGCGAATGAGGATCCTGTTTCAGTCTCCTCCTCTTCTGATTG CTCTTCCCAGAATCTTTCCAGGGAGGGAGTGAAGCTTCTCTCCTCCTCCCCTGACTCGCCGGTCCGGTACCAGAGTTTCA AGTGCTTCTCTGTCTCGGACCTCAAGAAGAAGGTGATGGCAGGGCTTTGTAAAAGTTGTGAAAAGGAAGGGCAATGGAGA TACTTGGTTTTGGGTGAAGCATGCTGCCATTTAGGCCTAATGGAAGATGCAATGGTTCTTCTCCAAACAGGGAAACGCCT TGCCAGCGCGGCGTTTCGGCGAGAAAGCGTGTGTTGGTCCGATGACAGCTTTTCACTCTCCGGCATTCCTTTTGCCGGCG ACGCCACAAACCCACCACCCACGTCTCCTCCCAAAGCCCCTCTCACGGATTCCACCGAGAGCGTCACCCAGCTCCTCACC CACATCAAGTTCCTCCTCCGCCGCCGTGCAGCCGCACTCGCTGCCCTTGATGCCGGCCTCTACCCGGAAGCCATCCGTCA CTTCTCAAAAATTGTCGATGGCCGCCGCGCCGCCCCACAAGGGTTCCTAGCAGAATGCTACATGCACAGAGCCTCCGCGC ACCGTTCCGCCGGTCGAATCGCAGAGTCCATCGCCGACTGCAACCGCACCTTAGCCCTCGACCCAACCTGCATCCAAGCC CTCGAAACCAGAGCATCACTCTTCGAAACAATTCGCTGCTTACCAGATTCTCTTCACGATCTTGAACACCTGAAGCTTCT CTACAACTCCATCCTGCGTGATCGCAAGCTTCCCGGCCCGGCGTGGAAGCGCCACAACGTGCGTTACAGGGAGATTCCGG GGAAACTCTGCACCCTCACCGCGAAGAGTCAAGAACTGAAACAGAGGCTGGCTTCAGGGGAGACTAGTAGCGTTGATTAC TACGCTCTGATCGGAGTTCGACGTGGTTGTTCTCGATCGGAGTTGGAGAGGGCTCATCTCTTGCTGTGTCTCCGGCACAA GCCTGATAGAGCAACAAGCTTCATCGATAGGTGCGAGCTTGCAGATGAACGTGATGTTGATTCAGTGAAGGAGAGAGCGA AGATGTCTGCATTGTTGTTGTATAGGTTGGTTCAGAAGGGTTACACGAGCGTGATGGGTACAATATTGGATGAAGAAGCT GCTGAGAAACAGAGGAAGAAAGCTGCATTGCAAGCTGCTGCGGCGGCGAATCAAGTTAAGATCAAAGCAGTGGCGAGTCA TGAACCTGAGATGAACAAGCCAGATAGTAGGAGCTGCAATGTTGTGGAAGACAAGTCTACATTGGTGTCTTCTTCCACTG TGAATCCGGCGGTGTTTCAGGGTGTTTTCTGCCGTGATCTTGCGGTGGTCGGAAACTTGCTTTCTCAGGCAAGGTTTAAT CAGCCAATTCCGGTGAAGTATGAAGCATTGAGCTGCTGA
Protein sequence (LotjaGi1g1v0760900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVTAHSLSATEKKHWWLTNRKIVEKYIKDARSLIATQEQSEIASALNLLDAALAISPRLDQALELRARSLLYLRRFKEV ADMLQDYIPSLRMANEDPVSVSSSSDCSSQNLSREGVKLLSSSPDSPVRYQSFKCFSVSDLKKKVMAGLCKSCEKEGQWR YLVLGEACCHLGLMEDAMVLLQTGKRLASAAFRRESVCWSDDSFSLSGIPFAGDATNPPPTSPPKAPLTDSTESVTQLLT HIKFLLRRRAAALAALDAGLYPEAIRHFSKIVDGRRAAPQGFLAECYMHRASAHRSAGRIAESIADCNRTLALDPTCIQA LETRASLFETIRCLPDSLHDLEHLKLLYNSILRDRKLPGPAWKRHNVRYREIPGKLCTLTAKSQELKQRLASGETSSVDY YALIGVRRGCSRSELERAHLLLCLRHKPDRATSFIDRCELADERDVDSVKERAKMSALLLYRLVQKGYTSVMGTILDEEA AEKQRKKAALQAAAAANQVKIKAVASHEPEMNKPDSRSCNVVEDKSTLVSSSTVNPAVFQGVFCRDLAVVGNLLSQARFN QPIPVKYEALSC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 572 | 572 | 2.0E-279 | – | |
PANTHER | 1 | 572 | 572 | 2.0E-279 | – | |
Gene3D | 216 | 357 | 142 | 2.5E-13 | ||
SUPERFAMILY | 250 | 345 | 96 | 5.0E-11 | ||
SMART | 284 | 317 | 34 | 0.0014 | ||
SUPERFAMILY | 395 | 433 | 39 | 7.33E-6 | ||
SMART | 398 | 480 | 83 | 0.0073 | ||
CDD | 399 | 433 | 35 | 6.68226E-7 | ||
Coils | 478 | 498 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0760900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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