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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0760900 |
| Transcript ID | LotjaGi1g1v0760900.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DnaJ; TAIR: AT4G02100.1 Heat shock protein DnaJ with tetratricopeptide repeat-containing protein; Swiss-Prot: sp|Q5R8D8|DNJC7_PONAB DnaJ homolog subfamily C member 7; TrEMBL-Plants: tr|I1JQQ9|I1JQQ9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0760900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:133402022..133404209) extracted from Lotus japonicus Gifu genome v1.2.
ATGCTTCAGGACTACATTCCTAGCCTGAGAATGGCGAATGAGGATCCTGTTTCAGTCTCCTCCTCTTCTGATTGCTCTTC CCAGAATCTTTCCAGGGAGGGAGTGAAGCTTCTCTCCTCCTCCCCTGACTCGCCGGTCCGGTACCAGAGTTTCAAGTGCT TCTCTGTCTCGGACCTCAAGAAGAAGGTGATGGCAGGGCTTTGTAAAAGTTGTGAAAAGGAAGGGCAATGGAGGTAAATT CACATACCCTTCACAGTTCACACCTGCATTCACATTATTCTGTTTCATTGGTTTTGACATTGCAACTTTTTTATTTATTG TTATTAAATAGGAATTTTAATTTTCTTCATTTTGGTTCAACTTTCATTAAATGAGTTTTAATTTATTGAATTTCGATATC AGATCGATCTAGGAGTAAAAGTAAGCTGCAAGCAACCTCAGATGGGTAGTAAATGCTAGTGCCTGCCATTCACCCAAATG GTTCCCAGCTTTTATTCTAAAAAACCCAATCAAATTTAATGCACATTTAATTTTTTTACTGTTATGATTTTCTCTATCAC ATACATGTGCATACACTACATGTGCACACACTATTGTTTTCTAGTACTATCAAATTAGATTAGTTAGTCAATAATTCAAC CTTATGTTTATTTAATTTTGGAATCTCATAAAGTTTGTACAATCATCCAGTACTACCTTATGCTTCTAGTACTAATAATG TGCTACAGTGAAATGGGTTAGTGATAATAATAAGAGAATACTAGTAGGATGAAATATGAATGAAATTGATGAATATTAAA CGTAATGTGTTAAAATTATGTTTCTCTTATCCACGTTAAATTAAACGTATTAAATTCTAGGTTCTCTGGTAATGCAAATA CGTTAAATCATGTTTGCGCCAAACCAAACATGTACTCTTGTTAATTTGACTAAGTTTTGTTTATGCAGATACTTGGTTTT GGGTGAAGCATGCTGCCATTTAGGCCTAATGGAAGATGCAATGGTTCTTCTCCAAACAGGGAAACGCCTTGCCAGCGCGG CGTTTCGGCGAGAAAGCGTGTGTTGGTCCGATGACAGCTTTTCACTCTCCGGCATTCCTTTTGCCGGCGACGCCACAAAC CCACCACCCACGTCTCCTCCCAAAGCCCCTCTCACGGATTCCACCGAGAGCGTCACCCAGCTCCTCACCCACATCAAGTT CCTCCTCCGCCGCCGTGCAGCCGCACTCGCTGCCCTTGATGCCGGCCTCTACCCGGAAGCCATCCGTCACTTCTCAAAAA TTGTCGATGGCCGCCGCGCCGCCCCACAAGGGTTCCTAGCAGAATGCTACATGCACAGAGCCTCCGCGCACCGTTCCGCC GGTCGAATCGCAGAGTCCATCGCCGACTGCAACCGCACCTTAGCCCTCGACCCAACCTGCATCCAAGCCCTCGAAACCAG AGCATCACTCTTCGAAACAATTCGCTGCTTACCAGATTCTCTTCACGATCTTGAACACCTGAAGCTTCTCTACAACTCCA TCCTGCGTGATCGCAAGCTTCCCGGCCCGGCGTGGAAGCGCCACAACGTGCGTTACAGGGAGATTCCGGGGAAACTCTGC ACCCTCACCGCGAAGAGTCAAGAACTGAAACAGAGGCTGGCTTCAGGGGAGACTAGTAGCGTTGATTACTACGCTCTGAT CGGAGTTCGACGTGGTTGTTCTCGATCGGAGTTGGAGAGGGCTCATCTCTTGCTGTGTCTCCGGCACAAGCCTGATAGAG CAACAAGCTTCATCGATAGGTGCGAGCTTGCAGATGAACGTGATGTTGATTCAGTGAAGGAGAGAGCGAAGATGTCTGCA TTGTTGTTGTATAGGTTGGTTCAGAAGGGTTACACGAGCGTGATGGGTACAATATTGGATGAAGAAGCTGCTGAGAAACA GAGGAAGAAAGCTGCATTGCAAGCTGCTGCGGCGGCGAATCAAGTTAAGATCAAAGCAGTGGCGAGTCATGAACCTGAGA TGAACAAGCCAGATAGTAGGAGCTGCAATGTTGTGGAAGACAAGTCTACATTGGTGTCTTCTTCCACTGTGAATCCGGCG GTGTTTCAGGGTGTTTTCTGCCGTGATCTTGCGGTGGTCGGAAACTTGCTTTCTCAGGCAAGGTTTAATCAGCCAATTCC GGTGAAGTATGAAGCATTGAGCTGCTGA
CDS sequence (LotjaGi1g1v0760900.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTCAGGACTACATTCCTAGCCTGAGAATGGCGAATGAGGATCCTGTTTCAGTCTCCTCCTCTTCTGATTGCTCTTC CCAGAATCTTTCCAGGGAGGGAGTGAAGCTTCTCTCCTCCTCCCCTGACTCGCCGGTCCGGTACCAGAGTTTCAAGTGCT TCTCTGTCTCGGACCTCAAGAAGAAGGTGATGGCAGGGCTTTGTAAAAGTTGTGAAAAGGAAGGGCAATGGAGATACTTG GTTTTGGGTGAAGCATGCTGCCATTTAGGCCTAATGGAAGATGCAATGGTTCTTCTCCAAACAGGGAAACGCCTTGCCAG CGCGGCGTTTCGGCGAGAAAGCGTGTGTTGGTCCGATGACAGCTTTTCACTCTCCGGCATTCCTTTTGCCGGCGACGCCA CAAACCCACCACCCACGTCTCCTCCCAAAGCCCCTCTCACGGATTCCACCGAGAGCGTCACCCAGCTCCTCACCCACATC AAGTTCCTCCTCCGCCGCCGTGCAGCCGCACTCGCTGCCCTTGATGCCGGCCTCTACCCGGAAGCCATCCGTCACTTCTC AAAAATTGTCGATGGCCGCCGCGCCGCCCCACAAGGGTTCCTAGCAGAATGCTACATGCACAGAGCCTCCGCGCACCGTT CCGCCGGTCGAATCGCAGAGTCCATCGCCGACTGCAACCGCACCTTAGCCCTCGACCCAACCTGCATCCAAGCCCTCGAA ACCAGAGCATCACTCTTCGAAACAATTCGCTGCTTACCAGATTCTCTTCACGATCTTGAACACCTGAAGCTTCTCTACAA CTCCATCCTGCGTGATCGCAAGCTTCCCGGCCCGGCGTGGAAGCGCCACAACGTGCGTTACAGGGAGATTCCGGGGAAAC TCTGCACCCTCACCGCGAAGAGTCAAGAACTGAAACAGAGGCTGGCTTCAGGGGAGACTAGTAGCGTTGATTACTACGCT CTGATCGGAGTTCGACGTGGTTGTTCTCGATCGGAGTTGGAGAGGGCTCATCTCTTGCTGTGTCTCCGGCACAAGCCTGA TAGAGCAACAAGCTTCATCGATAGGTGCGAGCTTGCAGATGAACGTGATGTTGATTCAGTGAAGGAGAGAGCGAAGATGT CTGCATTGTTGTTGTATAGGTTGGTTCAGAAGGGTTACACGAGCGTGATGGGTACAATATTGGATGAAGAAGCTGCTGAG AAACAGAGGAAGAAAGCTGCATTGCAAGCTGCTGCGGCGGCGAATCAAGTTAAGATCAAAGCAGTGGCGAGTCATGAACC TGAGATGAACAAGCCAGATAGTAGGAGCTGCAATGTTGTGGAAGACAAGTCTACATTGGTGTCTTCTTCCACTGTGAATC CGGCGGTGTTTCAGGGTGTTTTCTGCCGTGATCTTGCGGTGGTCGGAAACTTGCTTTCTCAGGCAAGGTTTAATCAGCCA ATTCCGGTGAAGTATGAAGCATTGAGCTGCTGA
Protein sequence (LotjaGi1g1v0760900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLQDYIPSLRMANEDPVSVSSSSDCSSQNLSREGVKLLSSSPDSPVRYQSFKCFSVSDLKKKVMAGLCKSCEKEGQWRYL VLGEACCHLGLMEDAMVLLQTGKRLASAAFRRESVCWSDDSFSLSGIPFAGDATNPPPTSPPKAPLTDSTESVTQLLTHI KFLLRRRAAALAALDAGLYPEAIRHFSKIVDGRRAAPQGFLAECYMHRASAHRSAGRIAESIADCNRTLALDPTCIQALE TRASLFETIRCLPDSLHDLEHLKLLYNSILRDRKLPGPAWKRHNVRYREIPGKLCTLTAKSQELKQRLASGETSSVDYYA LIGVRRGCSRSELERAHLLLCLRHKPDRATSFIDRCELADERDVDSVKERAKMSALLLYRLVQKGYTSVMGTILDEEAAE KQRKKAALQAAAAANQVKIKAVASHEPEMNKPDSRSCNVVEDKSTLVSSSTVNPAVFQGVFCRDLAVVGNLLSQARFNQP IPVKYEALSC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 490 | 490 | 9.3E-241 | – | |
| PANTHER | 1 | 490 | 490 | 9.3E-241 | – | |
| Gene3D | 133 | 275 | 143 | 1.9E-13 | ||
| SUPERFAMILY | 168 | 263 | 96 | 3.8E-11 | ||
| SMART | 202 | 235 | 34 | 0.0014 | ||
| Gene3D | 295 | 414 | 120 | 4.0E-5 | ||
| SUPERFAMILY | 313 | 351 | 39 | 5.83E-6 | ||
| SMART | 316 | 398 | 83 | 0.0073 | ||
| CDD | 317 | 351 | 35 | 4.12798E-7 | ||
| Coils | 396 | 416 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0760900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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