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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0763300 |
| Transcript ID | LotjaGi1g1v0763300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pectinesterase; TAIR: AT4G02320.1 Plant invertase/pectin methylesterase inhibitor superfamily; Swiss-Prot: sp|O81301|PME40_ARATH Probable pectinesterase/pectinesterase inhibitor 40; TrEMBL-Plants: tr|A0A1J7G4W6|A0A1J7G4W6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0763300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:133601469..133605816) extracted from Lotus japonicus Gifu genome v1.2.
TTCTAAGAACACCGAGCATGTGTCAAAATTTTATTGATGAAACATAACATTAGGGGACAAGTTTCACTCAATGCTAGCTA GTGTCCTCTGTGAGATCTGAACCCACACTAGTTCATTTATGCTCCAACTACCCTATCTGTCCACCGCATTCCCATCAGTA TACCACTTCACGAACACTATTAATCTCATCAGTCATAGAGCTTGATCCAGCTCCTATCACTTATTTTCTCCTTCTCCACG ATGTACAACCCCATGAGGAAAAAAACAGCACCCTTCCTAACTCTTATACCCATTCTCACCCTTGTTTTCGTGGTCCTCAT CTTTTCAGTAACTCACATCCAAAAAGCAACAAAACCACAAGCAACACACCACCTCCATATTCAAAAGCACATCCAACTCC AAGTGGCACACTCCACATGCGAAGGAACACTCTACCCAGAACTATGCGTCTCAACTTTATCCTCCTTCCCAGATCTCACC TCAAAATCCCTCCCACAAATGATTTGCTCTGCCCTCAACCACACCATCGACGAGGTCAAATTGTCCTCCTCCAACTGCAG CAGCATCCAGAACCTCCGAAACCTCGACAAACTCGAGCAGAGAGCCCTCGACGACTGCCTCAATTTATTCGATGACACCA CCGCAGAGCTCAAAAGCACCATTGCTGATCTCTCTCAAACCACAGTAGGCTCCAATGGCTACCATCACTGTCAGACACTT CTTAGCGGCGCCATGACAAATGTGTACACTTGTCTCGACGGTTTTGCTTACAGTAAAGGGAGCGTGAGGAGCAAAATACA GAAGGAGTTGTTTGACATTAGCCATCACGTGAGTAACTCACTCGCCATGCTTAAGAAAGTTCCTGGAGTGAAGAGACAAC TGTATTCCAGTAAGTCTGAGACTTTCCCTGAATATGGTAAGTTGAAAGATGGGTTTCCATCTTGGGTTTCCCCTAAAGAC AGGAAGCTACTACAAGCTGCCGTGAATGAGACCAAGTTTGATCTTGTGGTGGCTAAAGACGGCACCGGAAACTTCGCCAC TATAGGGGAAGCTGTGGCTGCTGCTCCTAACTCCAGCGCAACTAGGCAAGTACAAATTTATTCAACTTTTTTTACTAATC ATGTTTTTCCCTACACAATACTCGAAATTGAGACATGATACTTAATTAAGGAAGATCTGATATTAATTATATATACATCA TAATTTGTATACTCTATTGGCTATTCTCATTAATTAGTTGTTATCAATGTGGTCTTTTTCATTATTTTTGCCATTAGTGA TGTGAAGTTGAATTGTGTTTTCATAGGTTTGTTATACACATAAAAGCTGGGGCTTACTTTGAGAACGTGGAGGTGATAAG GAAGAAGACGAATGTGATGTTTGTGGGAGATGGGATTGGAAAGACTGTTGTGAAGGCCAACAGGAATGTCGTGGATGGCT GGACCACCTTTCAATCAGCTACTGTCGGTGCGTTGTTAAGTCGACTAATTTCTTTCTTTAATCTTCCTAGTTAGTACAGT AGGAGTACTATTTTTCTCATCAATAATTCATCAATAATGATAGAATGATATGTGAACGTACACGTAAAAAAAGTTCATGA CGTACGCTCAAAAGACATGTTGATTAGTGACTGTTTTTAATTTCGATAGACATTTTAGGGTCCAGCTTCTCTTATTCACT TTAGGTGAAAAATAAGCATTATTTGTGAGTAATTATTTTAAAAAGGTAAACAAAATAACTCAATTAATTATTGTAAATGA CGCAAATAGGCAATGATATTTGGAGTATATGCACGCTTCAATTATGAGGTGTGGTAAGTTATGAGGTCTCTAGTAACTAG TAAGTTATTTGGACGCCCGACCACTTCCTGTCTCCTTATGAGGTCTCTAGTAAGTTATTCAGAGATCAGACTTCTCATTC TCATACTTTTGCATGCATCAATCGTTTTCTTCACCCACTTCTTTCCAATTATCCGGTACTCTTGTCTTCCCATGATTCTT CTACAATGGTGGATTCTGCTTGTAAAAAATAGTGTAGTTGAACTTGGAATTACTAAAGAAGACCTCTGCATTATTGCTCT TGTACGCTCCCGTAAAGTAGACCTACCTTCATTTTGTTTTTTAGTCACAAACGTGCTTTTGGAATTGGACAACATAAGTA GTCCACACACATTGCTCCAACCCAACAAAAGAAGAATTTTGTTTTAATTTGGACCTTCCATACTTTAACTACATTAGGCC CACTTTTCCAATCTCTTCTTCTATATATGCTTAATTTTGTTTTTGGAAATGTTCTTCTAGGCTTAATTTGCTGCCAAAAC ATGGATACTTCACTTTGCTGTTTTTTTCATCAATGCTTCGCTATTTTTTTTTCTTTATCAATGCATTACTTTGGGGTTGG GCTTGGGGGTATACATGAGGGTGGGATTTGCATGAATCAACCTCTCGTAATTTCAATTTATGTCTGGTACCTTGAACATT TTTATGTTATAATTTGCCCACTAATTAAAGGAAAATGATGGTCATAGTGCATGCATTAATCATCCATCCATCATCAAAGT GATGAGAAACGAAGATAATAGAAAGAAGTACTAATTGATGTGATATAAAATATACTCCCTCCGTTCCTTATTAACTGTCC ACTTTAAAGAAAAAAATTTATTCCTATATATCTGTCAACTTAGAGTTTCAAGAGAGCATTAAATGATGTTTTTCCAAGAA ATGTCCTTGCAGGAACAATAAATGAGGAAAGATAATATACATATTAATGGGTGAAATAGGAAATCAAATAATACTTTTAT GAAAAGTAACAAAATTAATTGCACTCCTTAATATGTGTGTTTCTTCTCTTCCCGGATAGTTAAATAGGAACGGAGGGAGT AAGAGAGATAGATTAAAAGTGAGATGTGTTTTGAATTTCACAATATTTATTTGTATGAATATCATTACTCCTAATTAAAC TCACTATTGGTCCTCGTAGGATAGCTTAAGTTGTAGGAGCTAAGCAACATATGAGTTGGGTAGGGGAGGTCAAGGAAATG ACGGGTGTAATTTATCTTTCCGATGTAAAAAAAAAACTCATTAGAGGATACATCCCATGCAGCTTTTAGTGACGGCATTT TACCGTCACGAAATAAAAAATAGAGAAAAAAATAACTATACTACTTTGCGGCGATAAGAAACTGCCACAAAAATGAACAA ACTGACATTAAGCGTCTGATATTTGTGGTTTCGTTTTCAGCTGTGGTAGGAGACGGATTCATAGCAAAAGGCATAACCTT TGAGAACTACGCCGGAGCCAGCAAACACCAAGCCGTGGCCCTGAGGAGCGGTTCCGACCTCTCCGCCTTCTACCAATGCA GCTTCGTCGCCTACCAAGACACTCTCTACGTCCACTCCCTCCGCCAATTCTACCGCGAATGCGACATTTACGGCACCGTC GACTTCATCTTCGGCAACGCCGCAGTGGTCTTCCAAAACTGCAACCTCTACGCTCGCAAGCCCGACCCAAAACAGAAGAA TCTATTCACCGCACAAGGTAGAGAAGATCCAAACCAGAACACTGGGATTTCCATCTTGAATTGCAAGGTTGCTGCGGCTG CAGATTTGATCCCGGTGAAGGCGTCGTTCAAGAGTTACCTGGGTAGGCCTTGGAAGAAGTATTCGAGAACGGTTTTTCTG AATTCTTACATAGAGGATTTGATTGACCCTGTTGGGTGGTTGGAATGGGATGGAACGTTTGCATTGGATACTCTGTATTA TGGGGAGTACAAGAACAGAGGACCTGGTTCCAATACAAGTGCTAGAGTTACATGGCCGGGTTATAAGGTCATCAGTAGTT CTACTGAGGCAAGTCAATTCACAGTTGGGGAGTTCATACAAGGTAATAATTGGTTGAGCTCTACTGGAATTCCATTCTTC TCTGGTTTGAGTTGAAGGGTTATGGTTTATATAGTTTACTATGCTCTTTTTGTTTCCTTGTTATGCACTAAAATTATAAT GTGAATTGTTGCAATAATGGGTGGGAAATAAGCAATGAATAATCAAAAGTATTTAGAAGCATTGACTTTTGTGCTTCTTC CTTCTACATGGAAATCAGTGTAGACCTTCCTCTTGTCTTGACTAAGGATCAAGATGTAATAATAATGTGTTGGAGGTGGA GGGGGAAGCTGTTGAAAAAGTGTAAATGAATCTTATTTTATCTGATGAGTATTGTTTCCAATATATAGCTTTAAGCCACT TTGTTATCTTTACATGGTGTAATTAGTGACGGATCTAGAAATTTAATGTGGTGAGGGCAATATATACATGTAAATTCGTA AAAAAAAAATTAACATATACTATTAGAA
CDS sequence (LotjaGi1g1v0763300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTACAACCCCATGAGGAAAAAAACAGCACCCTTCCTAACTCTTATACCCATTCTCACCCTTGTTTTCGTGGTCCTCAT CTTTTCAGTAACTCACATCCAAAAAGCAACAAAACCACAAGCAACACACCACCTCCATATTCAAAAGCACATCCAACTCC AAGTGGCACACTCCACATGCGAAGGAACACTCTACCCAGAACTATGCGTCTCAACTTTATCCTCCTTCCCAGATCTCACC TCAAAATCCCTCCCACAAATGATTTGCTCTGCCCTCAACCACACCATCGACGAGGTCAAATTGTCCTCCTCCAACTGCAG CAGCATCCAGAACCTCCGAAACCTCGACAAACTCGAGCAGAGAGCCCTCGACGACTGCCTCAATTTATTCGATGACACCA CCGCAGAGCTCAAAAGCACCATTGCTGATCTCTCTCAAACCACAGTAGGCTCCAATGGCTACCATCACTGTCAGACACTT CTTAGCGGCGCCATGACAAATGTGTACACTTGTCTCGACGGTTTTGCTTACAGTAAAGGGAGCGTGAGGAGCAAAATACA GAAGGAGTTGTTTGACATTAGCCATCACGTGAGTAACTCACTCGCCATGCTTAAGAAAGTTCCTGGAGTGAAGAGACAAC TGTATTCCAGTAAGTCTGAGACTTTCCCTGAATATGGTAAGTTGAAAGATGGGTTTCCATCTTGGGTTTCCCCTAAAGAC AGGAAGCTACTACAAGCTGCCGTGAATGAGACCAAGTTTGATCTTGTGGTGGCTAAAGACGGCACCGGAAACTTCGCCAC TATAGGGGAAGCTGTGGCTGCTGCTCCTAACTCCAGCGCAACTAGGTTTGTTATACACATAAAAGCTGGGGCTTACTTTG AGAACGTGGAGGTGATAAGGAAGAAGACGAATGTGATGTTTGTGGGAGATGGGATTGGAAAGACTGTTGTGAAGGCCAAC AGGAATGTCGTGGATGGCTGGACCACCTTTCAATCAGCTACTGTCGCTGTGGTAGGAGACGGATTCATAGCAAAAGGCAT AACCTTTGAGAACTACGCCGGAGCCAGCAAACACCAAGCCGTGGCCCTGAGGAGCGGTTCCGACCTCTCCGCCTTCTACC AATGCAGCTTCGTCGCCTACCAAGACACTCTCTACGTCCACTCCCTCCGCCAATTCTACCGCGAATGCGACATTTACGGC ACCGTCGACTTCATCTTCGGCAACGCCGCAGTGGTCTTCCAAAACTGCAACCTCTACGCTCGCAAGCCCGACCCAAAACA GAAGAATCTATTCACCGCACAAGGTAGAGAAGATCCAAACCAGAACACTGGGATTTCCATCTTGAATTGCAAGGTTGCTG CGGCTGCAGATTTGATCCCGGTGAAGGCGTCGTTCAAGAGTTACCTGGGTAGGCCTTGGAAGAAGTATTCGAGAACGGTT TTTCTGAATTCTTACATAGAGGATTTGATTGACCCTGTTGGGTGGTTGGAATGGGATGGAACGTTTGCATTGGATACTCT GTATTATGGGGAGTACAAGAACAGAGGACCTGGTTCCAATACAAGTGCTAGAGTTACATGGCCGGGTTATAAGGTCATCA GTAGTTCTACTGAGGCAAGTCAATTCACAGTTGGGGAGTTCATACAAGGTAATAATTGGTTGAGCTCTACTGGAATTCCA TTCTTCTCTGGTTTGAGTTGA
Protein sequence (LotjaGi1g1v0763300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYNPMRKKTAPFLTLIPILTLVFVVLIFSVTHIQKATKPQATHHLHIQKHIQLQVAHSTCEGTLYPELCVSTLSSFPDLT SKSLPQMICSALNHTIDEVKLSSSNCSSIQNLRNLDKLEQRALDDCLNLFDDTTAELKSTIADLSQTTVGSNGYHHCQTL LSGAMTNVYTCLDGFAYSKGSVRSKIQKELFDISHHVSNSLAMLKKVPGVKRQLYSSKSETFPEYGKLKDGFPSWVSPKD RKLLQAAVNETKFDLVVAKDGTGNFATIGEAVAAAPNSSATRFVIHIKAGAYFENVEVIRKKTNVMFVGDGIGKTVVKAN RNVVDGWTTFQSATVAVVGDGFIAKGITFENYAGASKHQAVALRSGSDLSAFYQCSFVAYQDTLYVHSLRQFYRECDIYG TVDFIFGNAAVVFQNCNLYARKPDPKQKNLFTAQGREDPNQNTGISILNCKVAAAADLIPVKASFKSYLGRPWKKYSRTV FLNSYIEDLIDPVGWLEWDGTFALDTLYYGEYKNRGPGSNTSARVTWPGYKVISSSTEASQFTVGEFIQGNNWLSSTGIP FFSGLS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| Phobius | 12 | 33 | 22 | - | – | |
| TMHMM | 12 | 34 | 23 | - | – | |
| TIGRFAM | 20 | 206 | 187 | 7.3E-23 | ||
| PANTHER | 24 | 565 | 542 | 9.7E-267 | – | |
| PANTHER | 24 | 565 | 542 | 9.7E-267 | – | |
| Phobius | 34 | 566 | 533 | - | – | |
| SMART | 51 | 203 | 153 | 6.1E-34 | ||
| Gene3D | 54 | 209 | 156 | 1.8E-18 | ||
| Pfam | 57 | 203 | 147 | 1.3E-26 | ||
| SUPERFAMILY | 57 | 207 | 151 | 4.71E-28 | ||
| CDD | 58 | 209 | 152 | 3.4918E-39 | – | |
| Gene3D | 248 | 565 | 318 | 2.5E-134 | ||
| SUPERFAMILY | 252 | 564 | 313 | 7.85E-120 | ||
| Pfam | 254 | 551 | 298 | 4.0E-147 | ||
| ProSitePatterns | 398 | 407 | 10 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Enzyme inhibitor activity | Binds to and stops, prevents or reduces the activity of an enzyme. | ||
| Molecular function | Pectinesterase activity | Catalysis of the reaction: pectin + n H2O = n methanol + pectate. | ||
| Biological process | Cell wall modification | The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly. |
Expression pattern of LotjaGi1g1v0763300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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