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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0768400 |
| Transcript ID | LotjaGi1g1v0768400.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | OTU domain-containing protein, putative; TAIR: AT3G62940.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|Q7ZV00|OTU6B_DANRE OTU domain-containing protein 6B; TrEMBL-Plants: tr|V7D1I7|V7D1I7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0768400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:134101009..134102123) extracted from Lotus japonicus Gifu genome v1.2.
TTGTTTTCCACCAACTGTTTGAGTAACTAATGGAAGCTAAATTTTTCTTGCATGGTAGACAACCTATCAAAAACAACATA TCTTTCTTATCCTTTGTTTTCAAAATACATGGTTGATTTATTTTTCTTTCAATAAATCCCTAGTTATTTTTTGTTCATGT TTTTAACTTGACTATCAAGGTTTGTGTTACTTCTTGAGTTCTTATGGTTCTTACACAATGCACCACAATGGCTGATGTTT TTTTCAGGAATGAGATATCAGAGTTGCAGAAAAAGGAACTTGAAATGAAGAAGGGAGCAGCTCGGGGCAGCAAGGCTGAG CAGAAAACTAAGAAGAAGCAAGTGGAGGAAGAGGTTTCTCAACTTTCTGCTACGCTTAAGGAGAAACATGCCAAAGAACT GGCTGCATTAGGCTATAGCAGTGCTAATCGAAATGAAAAGGGCAATTTGGACAGTTTGGTGAAGGCCATAGCTGGAGTAT CTGTTAATAGTCAACCTGAACATACAAAGGCCAGCAAGGCCAAACAGAGGCGAGACAAAAAAGCTCAACAAGAAGCAGAA AGGGAGCAGAGAATCCAAGCTGAGCAGAGTGAAATTATAAGTGATCGAATGATTGAAAATGAGAAATTGGAAAGGAAGTT GAAGCCTCTTGGTTTGACTGTTTCTGAGATAAAGCCTGATGGGCACTGCCTATATAGAGCTGTTGAGGATCAGCTGGCTG TTCGATCTGGGGGTAGATCTCCTTACACATATCAAGAACTTCGAGAAATGGTGGCTGCGTACATGAGAAATCACACATCT GATTTCATTCCTTTTTTTCTATCTGAGAATTTGATTGAAGCTGATTCTGATGAATCACTTACTCAGAAGTTCGAAAATTA TTGTAAAGAAGTGGAGTCAACAGCGGTTTGGGGAGGACAACTAGAGCTTGGTGCCTTGACTCACATCCTGAAGAAGCATA TTTTGATATTTTCAGGGTCCTTCCCAGACGTGGAGATGGGGAAAGAGTACAAATCCAATGATGCTATTGGCTCGTCTAAT TCGAGTATTATGCTTTCTTACCACAGGCATGCGTTTGGGCTAGGTGAGCACTACAATTCTTTGGTCCCAACTTGA
CDS sequence (LotjaGi1g1v0768400.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGAAGGGAGCAGCTCGGGGCAGCAAGGCTGAGCAGAAAACTAAGAAGAAGCAAGTGGAGGAAGAGGTTTCTCAACT TTCTGCTACGCTTAAGGAGAAACATGCCAAAGAACTGGCTGCATTAGGCTATAGCAGTGCTAATCGAAATGAAAAGGGCA ATTTGGACAGTTTGGTGAAGGCCATAGCTGGAGTATCTGTTAATAGTCAACCTGAACATACAAAGGCCAGCAAGGCCAAA CAGAGGCGAGACAAAAAAGCTCAACAAGAAGCAGAAAGGGAGCAGAGAATCCAAGCTGAGCAGAGTGAAATTATAAGTGA TCGAATGATTGAAAATGAGAAATTGGAAAGGAAGTTGAAGCCTCTTGGTTTGACTGTTTCTGAGATAAAGCCTGATGGGC ACTGCCTATATAGAGCTGTTGAGGATCAGCTGGCTGTTCGATCTGGGGGTAGATCTCCTTACACATATCAAGAACTTCGA GAAATGGTGGCTGCGTACATGAGAAATCACACATCTGATTTCATTCCTTTTTTTCTATCTGAGAATTTGATTGAAGCTGA TTCTGATGAATCACTTACTCAGAAGTTCGAAAATTATTGTAAAGAAGTGGAGTCAACAGCGGTTTGGGGAGGACAACTAG AGCTTGGTGCCTTGACTCACATCCTGAAGAAGCATATTTTGATATTTTCAGGGTCCTTCCCAGACGTGGAGATGGGGAAA GAGTACAAATCCAATGATGCTATTGGCTCGTCTAATTCGAGTATTATGCTTTCTTACCACAGGCATGCGTTTGGGCTAGG TGAGCACTACAATTCTTTGGTCCCAACTTGA
Protein sequence (LotjaGi1g1v0768400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKKGAARGSKAEQKTKKKQVEEEVSQLSATLKEKHAKELAALGYSSANRNEKGNLDSLVKAIAGVSVNSQPEHTKASKAK QRRDKKAQQEAEREQRIQAEQSEIISDRMIENEKLERKLKPLGLTVSEIKPDGHCLYRAVEDQLAVRSGGRSPYTYQELR EMVAAYMRNHTSDFIPFFLSENLIEADSDESLTQKFENYCKEVESTAVWGGQLELGALTHILKKHILIFSGSFPDVEMGK EYKSNDAIGSSNSSIMLSYHRHAFGLGEHYNSLVPT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 31 | 31 | - | – | |
| PANTHER | 2 | 275 | 274 | 2.3E-64 | – | |
| PANTHER | 2 | 275 | 274 | 2.3E-64 | – | |
| Coils | 10 | 37 | 28 | - | – | |
| MobiDBLite | 65 | 98 | 34 | - | – | |
| MobiDBLite | 75 | 98 | 24 | - | – | |
| SUPERFAMILY | 102 | 275 | 174 | 9.42E-30 | ||
| Gene3D | 110 | 275 | 166 | 5.1E-35 | – | |
| ProSiteProfiles | 124 | 276 | 153 | 27.988 | ||
| Pfam | 130 | 270 | 141 | 3.5E-34 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0768400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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