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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0768400 |
| Transcript ID | LotjaGi1g1v0768400.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | OTU domain-containing protein, putative; TAIR: AT3G62940.2 Cysteine proteinases superfamily protein; Swiss-Prot: sp|Q7ZV00|OTU6B_DANRE OTU domain-containing protein 6B; TrEMBL-Plants: tr|K7MZG8|K7MZG8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0768400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:134101009..134103388) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGGATACCCATGAAATTGAGGAGAAGGCGCATGAAGAAGTGATTTCAGACGAAGCATCTGAAAAGAAGCAGGAAAC TCGTGATGAAATTCTTTCACGTCACAGGTGATCCACTCTCCATGAGATTAACAGTTTCAGCTCTCATTCATTTAGATGGG TTTCAAAACTTCTGCACAAGCAGGCTTTATCTGAAGTACTATGTTTTTTTTAGTTTACTTCTATTTTGTCAAACAAGATA AAAGGAGTTTTGTGGTAGATTCATGGTTATCATACTTCATCATGGCGTAGCCTATTAAATCACAAGCCCAATTAGTAGAT AATATAGGATGTGGTTTCAATAGATTAGGTGACATGGAGATCTAGATAATAATGAATTGAAAGTAATATTGCATTCCAAA TGTTATATGATTTGTCAAGGATTCATTCTGTAGATCTAATATGTTCTTGATTAAGGCTTATTTGGTCTTGATTCTTCTTT AGTTTGGTCGCCACTAATAGGTCTATCTGGTACTTGGCATGTATTAGTTTTTCTCACAACCATCCAGATGCTCATGGTAG GTGAGATAATGGCCATGTGCTTACATATTAGAGTGCCTTGGCAGGGCACTCCCTGTTTTCAAAACCTTCCTCAGCACATT TCTTCACCCTGAACTCTAGATTACCACTACAAAATGTTTCTGTAACAACATTTGAGGTGTATTTCATGGATTTTTCTAGT TCTCTGTGGTACTTTCCCTATGTTATTCTTAGACATGCTCAGCAGTTTTTATTTCCTTCATTATTTTCTCCCTTTGTTTT TAGTCTGTGATTCTTTCCAATATAGACAGAACTTGCTGAAACTTCCTCTCATGTCAGCTCCCTTTAAAGTAAATGTCTAA AAATGATTATATATGTTAATTACAGTTTTTGATCTATAGTTCTGATTTTTCTTTTACAAGAATGAGTAAGATATCCAAGA AAACAAGGTGATCAAGAGTTTTAGTTAGGTTCCTCCTCTAGATTTTGACATAGACACGGTCTGCATCACACTAGTGAACT TAAACTTGGTTCTTTTTATTTTATATATATTTTTTAAAATAAATAAAAAAGGAGCTCTACATTCACTGGTGTGAGTGTAC CTCCCATTCCCGTAGCAACTTCAGCATTTGGTTTCGTGACACCTTTTGCTACTTTACAGTTTACACCTATAACAGCTGTA GTAAATAAAAATAAAATCAGGTACTATGGTTTAAGGTTGATTTACATATCCACACAGCCATATTCTTGTTTTCCACCAAC TGTTTGAGTAACTAATGGAAGCTAAATTTTTCTTGCATGGTAGACAACCTATCAAAAACAACATATCTTTCTTATCCTTT GTTTTCAAAATACATGGTTGATTTATTTTTCTTTCAATAAATCCCTAGTTATTTTTTGTTCATGTTTTTAACTTGACTAT CAAGGTTTGTGTTACTTCTTGAGTTCTTATGGTTCTTACACAATGCACCACAATGGCTGATGTTTTTTTCAGGAATGAGA TATCAGAGTTGCAGAAAAAGGAACTTGAAATGAAGAAGGGAGCAGCTCGGGGCAGCAAGGCTGAGCAGAAAACTAAGAAG AAGCAAGTGGAGGAAGAGGTTTCTCAACTTTCTGCTACGCTTAAGGAGAAACATGCCAAAGAACTGGCTGCATTAGGCTA TAGCAGTGCTAATCGAAATGAAAAGGGCAATTTGGACAGTTTGGTGAAGGCCATAGCTGGAGTATCTGTTAATAGTCAAC CTGAACATACAAAGGCCAGCAAGGCCAAACAGAGGCGAGACAAAAAAGCTCAACAAGAAGCAGAAAGGGAGCAGAGAATC CAAGCTGAGCAGAGTGAAATTATAAGTGATCGAATGATTGAAAATGAGAAATTGGAAAGGAAGTTGAAGCCTCTTGGTTT GACTGTTTCTGAGATAAAGCCTGATGGGCACTGCCTATATAGAGCTGTTGAGGATCAGCTGGCTGTTCGATCTGGGGGTA GATCTCCTTACACATATCAAGAACTTCGAGAAATGGTGGCTGCGTACATGAGAAATCACACATCTGATTTCATTCCTTTT TTTCTATCTGAGAATTTGATTGAAGCTGATTCTGATGAATCACTTACTCAGAAGTTCGAAAATTATTGTAAAGAAGTGGA GTCAACAGCGGTTTGGGGAGGACAACTAGAGCTTGGTGCCTTGACTCACATCCTGAAGAAGCATATTTTGATATTTTCAG GGTCCTTCCCAGACGTGGAGATGGGGAAAGAGTACAAATCCAATGATGCTATTGGCTCGTCTAATTCGAGTATTATGCTT TCTTACCACAGGCATGCGTTTGGGCTAGGTGAGCACTACAATTCTTTGGTCCCAACTTGA
CDS sequence (LotjaGi1g1v0768400.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGATACCCATGAAATTGAGGAGAAGGCGCATGAAGAAGTGATTTCAGACGAAGCATCTGAAAAGAAGCAGGAAAC TCGTGATGAAATTCTTTCACGTCACAGGAATGAGATATCAGAGTTGCAGAAAAAGGAACTTGAAATGAAGAAGGGAGCAG CTCGGGGCAGCAAGGCTGAGCAGAAAACTAAGAAGAAGCAAGTGGAGGAAGAGGTTTCTCAACTTTCTGCTACGCTTAAG GAGAAACATGCCAAAGAACTGGCTGCATTAGGCTATAGCAGTGCTAATCGAAATGAAAAGGGCAATTTGGACAGTTTGGT GAAGGCCATAGCTGGAGTATCTGTTAATAGTCAACCTGAACATACAAAGGCCAGCAAGGCCAAACAGAGGCGAGACAAAA AAGCTCAACAAGAAGCAGAAAGGGAGCAGAGAATCCAAGCTGAGCAGAGTGAAATTATAAGTGATCGAATGATTGAAAAT GAGAAATTGGAAAGGAAGTTGAAGCCTCTTGGTTTGACTGTTTCTGAGATAAAGCCTGATGGGCACTGCCTATATAGAGC TGTTGAGGATCAGCTGGCTGTTCGATCTGGGGGTAGATCTCCTTACACATATCAAGAACTTCGAGAAATGGTGGCTGCGT ACATGAGAAATCACACATCTGATTTCATTCCTTTTTTTCTATCTGAGAATTTGATTGAAGCTGATTCTGATGAATCACTT ACTCAGAAGTTCGAAAATTATTGTAAAGAAGTGGAGTCAACAGCGGTTTGGGGAGGACAACTAGAGCTTGGTGCCTTGAC TCACATCCTGAAGAAGCATATTTTGATATTTTCAGGGTCCTTCCCAGACGTGGAGATGGGGAAAGAGTACAAATCCAATG ATGCTATTGGCTCGTCTAATTCGAGTATTATGCTTTCTTACCACAGGCATGCGTTTGGGCTAGGTGAGCACTACAATTCT TTGGTCCCAACTTGA
Protein sequence (LotjaGi1g1v0768400.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEDTHEIEEKAHEEVISDEASEKKQETRDEILSRHRNEISELQKKELEMKKGAARGSKAEQKTKKKQVEEEVSQLSATLK EKHAKELAALGYSSANRNEKGNLDSLVKAIAGVSVNSQPEHTKASKAKQRRDKKAQQEAEREQRIQAEQSEIISDRMIEN EKLERKLKPLGLTVSEIKPDGHCLYRAVEDQLAVRSGGRSPYTYQELREMVAAYMRNHTSDFIPFFLSENLIEADSDESL TQKFENYCKEVESTAVWGGQLELGALTHILKKHILIFSGSFPDVEMGKEYKSNDAIGSSNSSIMLSYHRHAFGLGEHYNS LVPT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 69 | 69 | - | – | |
| PANTHER | 20 | 323 | 304 | 1.5E-67 | – | |
| PANTHER | 20 | 323 | 304 | 1.5E-67 | – | |
| Coils | 58 | 85 | 28 | - | – | |
| MobiDBLite | 117 | 144 | 28 | - | – | |
| MobiDBLite | 123 | 144 | 22 | - | – | |
| SUPERFAMILY | 150 | 323 | 174 | 1.47E-29 | ||
| Gene3D | 158 | 323 | 166 | 7.9E-35 | – | |
| ProSiteProfiles | 172 | 324 | 153 | 27.988 | ||
| Pfam | 178 | 318 | 141 | 5.2E-34 | ||
| Coils | 322 | 324 | 3 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0768400.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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