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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0768800 |
| Transcript ID | LotjaGi1g1v0768800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Membrane-anchored ubiquitin-fold protein; TAIR: AT1G22050.1 membrane-anchored ubiquitin-fold protein 6 precursor; Swiss-Prot: sp|Q6Z8K4|MUB3_ORYSJ Membrane-anchored ubiquitin-fold protein 3; TrEMBL-Plants: tr|I3SYY1|I3SYY1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0768800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:134118620..134122538) extracted from Lotus japonicus Gifu genome v1.2.
CAGAGAATAAAAATGAATAGACTCTCGTGACACCTGCAGTAACCGTTCCGGTACTGTTAGATCCCCTCTCTCTGTGAATA GTGAACACAGATAAAGAGAGAGAAAGCGAAAAAGAGCACAGTGAAGAAGAAACGAATCCACGCCACGTTCCAGATCTATA CACTACCACTCCTCACTGATCCTCCATCAATGGCTTCGTGACAAGGTATCATCAATTCTTCTCTCTCGCTATTCAATTTT TCCATGCTCAATTTCACTTCTAGCTCAAGTTTTTCAGATTATCCAGAATATATATATATATATTCAAATCGTATTCGTTT TCTTCAAAATTTTAGGGTTTAATTTGTGTTGATTACCGTAGAATCACATTCTGATCGGCTTCAATTTTAGGAAATCGAAC AATTGTGATCGGTCCTGGTTTTCATTTCGTAGAATCAATTTTTATGTGAATTCGATTTGATCTGTGGGAATCCGATCTCT CTTTTTTGGTGTTAAAGTTGCATATATGGACGCAGAGGCATCTCTCGTGAAGATTGTTCGGAGAAGCAATTGGATCATAT GAGGTATTCACTTGCTTGTATTGGTTCTTCTTCAGCTGTCAATTCAGATGTACAATTTTTCCAATCTTGCTGTAACAAGG AATTTTCCCTCAGATTTACACAGGTTAGTTCTGGATAGCAACGCCAACGCGCACATAGTTTCATTCTTCGTGTTTATGAT TCGGTGTGTTGTGTGTAAATAGATTGGACTAATTAATGGGAATGGGAACTCGTTTGCAGGTGAGCAAGGCGAGACTTAAT CCTTTGATCCAAGAAAGTACTGTTTTGCATTTCTACAAGCTTGGCAGAGGTGGACACAGGTTATCATGGCTGAAGGTGAA GGAGAGGACCGTATTGAGCTTAAGTTCCGCATATTTGATGGAACAGATATAGCACACAGTAATTACCCACCATCTACCAC AGTGGGTACCCTTAAGCAAAGGGTAATTGATGAGTGGCCTCAAGGTTAGTAGTCATCTTATGAGGTGTGTCTGTATTGAA TATATTATTTAGGAATAACCTGCCATTTGGATTTTGATTCTCTAAAAATTTGTAACATCAAAGTTCTTGAAAGATTTGAA ATAATATCAATATGGTCCAATTTGATGTCAAATGAAATACTGATTTAATGTTATGAGTTTTTGGACGACTAAATTAATGT TTAGTGTATCTCTCTAGGACCAAAATGCTTGTTTAGCCTTTTGTATCCATTTAGGATTAAATTATGTTTAAATCATGTTG ATAATTTCTTTTATTTTGAATCATTGCTGTTGAAGAAGTACTTTGTTCCTATTGGATACCACAAAGAACTAATTTAAAAG TACATTAAACTAATCTTTTTGGAGAATGACTGTAGAATGTATCCAGCTATTTTTCACTTCATGGATGACAACAACGATGC CTTGCCCCATTTAACGAACCATTAGTTAAAAATTTCAATTCTCTTATTGCTATATCTATCAATCATTTTAGTTGCAGAAT TGCATGCTGTTCTTAATGCATTTATCTTGTAGTTCTTGTGTGTCCACTGTCCAGTACTCCAAACTTGGTACTGTGGACGG ACCTAGAGAGAAAAAAAATTAATAGAATAATATTCAAATCTGTTTTTTCGCCTAAAAAAATTATACCACCTCTTCTAACT ATTGGCTAGTGAGTGCTAATTTTGTTAAATGTGTTAAATTTCCCCACATTTTTCTAGGACCTCCCTGCTTGGTACCTGTT CAAGTAAAAAATAAATGTAACCGGCATGATCATTCTTGCTGATAAATGACTCATTTTCTTTCCTCATGTCATGACCTAGA CACGTTAATATTATGTTTTTTTTTTTTTTTATCTTTTTCTGTAACACAATTGTCTTACCTTTTAATGGAATCTTTCCCTT TACAGACAAAACAGTTACACCGAATTCAGTAAATGACCTAAAACTTATACATGCTGGTAAAGTTTTGGCCGATAGCAACA AAACTCTTGCTGATTCCAGAATAACTTTTGGTGACAACCCCACTGGTGCTATTACCATGCATGTTGTAGTACAGCCTCCG GTAGCAAAAAAGAAGACAGGTTTGTTCAATCTTCTTTTTTTGTCAACTTTGTTCAATCTTTTTATCTGCTCTTTTGCTCA AGCAGTATGGTTACTTATGAGACCTATACCTCTACAGGGTGTGGGTAAAAACAGAGTAACTTTCGTTTAAACATGTTAAA AAGTTTTAAGGACATGGCAACATACACTGAAAAATATGCACAAAAAATGATACTATAATTTTGGAAGATTAAAGAAAAGG TTCCCATTTGTTGTCAGAAATTTCGGACGAAAATCATCTGTCTCTTGACGCTGTCCCCAACCCTGTCCAGTCAATCACAA TTTAACACGCCAATTGAATATTACACGTCACAGCTTATGTATTTTAATGTTGTCACACCCTCAGTTAGTTTTAAACTTCA TTGCCATCTTCTTCCACTCAGGAAGGAAAGTCATTCCAGCCAGCCCTAGATGAAGCCTGCACATTTGAAAACACATCGCT AGAATTCATTTGCCACCACTTTATACTATTCTTGGAATCACCACTCACTCCCATTCTTCGAACTCCTGGCGGCACCACAT GGTTACTATTGCTATGCTGATTTTTAAAGAAAAAGAAACACAAAACAGAGGAGGCTTTGCTTCGAATTCTTGTGTTATGC TCTGTGTAGTTTTAATTACAATCAAGCTCATTTTTTAATCATAATTTTTCTGTCATGCTCTCATTGATCTGTGTATAGTA ATGGGGACCAATTTGAAAGTGAACTTTACCCAGTACCCACTGACAAGTTTAAAATGTTATCCTCTCTAAGACCCTAAAAA GCACTTAACTAAACCAGTATATTTGCAGCTTCTGTTTGAAAAATATACATTGAGCTAAAATTTAGATCATTAAAATGCCT TCATTGCTACTTTTGCTAACACTTTAGCTGTCTTAGCTTCAGTTTCTGCAACCCCTGTCTCCCTGGCTGCTACTTCAGCT TATGCAATGGCAACTTCTTCATCTTCATTTGTTTTCTCTAAGATTTCTCAACAGAAAACATATTAGGCCCAAAATCAGTT ACTGCCAAAAACAATGCCTGCAAATCAAATGCAAGTTTATATGGCTACTTGTCTGTTACTATATTTTCTCATGTGCTTCT TTACTTGGTTATTTTGCAGATAAGAATCAGGATGGCAAGAAAAAAATGAATTCATGCTCTTGCACTATCCTTTAGAGTAG GAAGAATACGTTGTGGCTGCGCTTCAAGATAAGGTTGCACTTTTCCTACTTTTAACTCTTGGGATGATGGTATAGGCTGT GCGCTATCCAATGGCATTGCATTGGATTTTATCAAATCGTTGTTGCTTGTTTGCTTCTATTGTTGTTCAATTCATTTTTC TAGTCATTGTCTTATGAGTGAAAATCATAAATTAACTTAGCATTGTAAAACTCCATCCTCAACAAGTACAATAAGCAGGC CACAAACCTTGGCCATGTGTCCCGATCAGGCGGCCCCAGACATTTGATGACTGCACATATATACTTTGAGAAAATCTCCT AACCCCCCTGTTTCTGTACACATGATTGACTTTCTTCAGAAGCACTGAGCGGGTGTACCACACTACTACCATACTATAAT TTTTTTGTTGGTACATACTACCATATATAGTAAACATACACGTTCAGTTATTTCCTATTTTAGTTTTTTTTTTAAATACA AAATGAATAATATCTTTGAGATCGTGAGAGGTATAGTTCTGAAAACTCAGTGTAGCACTGAAAAAGTGTAAATTACTTCA TTTGATGATGACACTGACACCTGATAAGAAAAAGTACTTCTGTTTTAATTCTTGGTTTTAAACTTCTATGTTAATTCAC
CDS sequence (LotjaGi1g1v0768800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGAAGGTGAAGGAGAGGACCGTATTGAGCTTAAGTTCCGCATATTTGATGGAACAGATATAGCACACAGTAATTA CCCACCATCTACCACAGTGGGTACCCTTAAGCAAAGGGTAATTGATGAGTGGCCTCAAGACAAAACAGTTACACCGAATT CAGTAAATGACCTAAAACTTATACATGCTGGTAAAGTTTTGGCCGATAGCAACAAAACTCTTGCTGATTCCAGAATAACT TTTGGTGACAACCCCACTGGTGCTATTACCATGCATGTTGTAGTACAGCCTCCGGTAGCAAAAAAGAAGACAGATAAGAA TCAGGATGGCAAGAAAAAAATGAATTCATGCTCTTGCACTATCCTTTAG
Protein sequence (LotjaGi1g1v0768800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEGEGEDRIELKFRIFDGTDIAHSNYPPSTTVGTLKQRVIDEWPQDKTVTPNSVNDLKLIHAGKVLADSNKTLADSRIT FGDNPTGAITMHVVVQPPVAKKKTDKNQDGKKKMNSCSCTIL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 104 | 104 | 1.1E-34 | – | |
| PIRSF | 1 | 122 | 122 | 1.5E-42 | ||
| PANTHER | 4 | 122 | 119 | 2.2E-58 | – | |
| PANTHER | 4 | 122 | 119 | 2.2E-58 | ||
| SUPERFAMILY | 6 | 101 | 96 | 1.98E-24 | ||
| Pfam | 8 | 120 | 113 | 2.8E-36 | ||
| CDD | 10 | 98 | 89 | 7.44258E-41 | – | |
| ProSiteProfiles | 10 | 79 | 70 | 10.157 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0768800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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