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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0778700 |
| Transcript ID | LotjaGi1g1v0778700.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cysteine synthase; TAIR: AT4G14880.1 O-acetylserine (thiol) lyase (OAS-TL) isoform A1; Swiss-Prot: sp|Q43317|CYSK_CITLA Cysteine synthase; TrEMBL-Plants: tr|I3RZE0|I3RZE0_LOTJA Cysteine synthase; Found in the gene: LotjaGi1g1v0778700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:135065849..135069749) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGGAAGAGAAGACTACCATCGCTAATGATGTCACTGAAGTAAGCCATATTCAGTTATGTTCTTTTTTGTCTCTGTG ATGAACAATCTAGCTTAGTTACATGTGAATTCGTTTATGAAATGTGCAGTTAATTGGCAACACTCCATTGGTATATCTCA ACCGTATCGTAGATGGCTGTGTTGGTCGAATTGCTGCTAAGCTGGAAATGATGGAACCCTGCTCTAGTGTCAAAGACAGG TATACAGATTTCTCCATTCTTATATTGGAAAGTGAGCTAGCAAATTGGCGTCTAACCAGCGTCTAACCATTTAGGTTGTG TTTGGTTAAATAACTTAATTGAACACTTATAGAGTATTTTTTGAGAAACTTATTGAAATAAGCTCAAAATAGATTATAGA TAAGTATAAGCACCTGCATAAGCTAATTTGACCAGCTTATGAAATAAACTCAAAATAGCTTATAGGTCATAAGATATTTT TCAGAAGTTTACCCGAACATAAAATGCTCATACAATAAGATAAGCTCAAATAAGTTATTTCAAACGCAGCCTTACTCTTG ATTTGCTGGACTCTGAATCTTCACACCCTTCAGAATAAATGCCTAGATTGATGGAAGTTTTGGAATAGAAGTTATTGAGT CCCAATTCGTTTATCTGTCTAATGCAATTATAAGTAATAAGTATATAAAAAACTCCTTTTTATTAATGTATAATTTTATT TTCCTACAGGATAGGATATAGCATGATTGCAGATGCTGAAGAGAAGGGGCTCATTAAACCGGGTGAAGTTAGTTCTTGTT TTGGATTGTCCTTTCTTTCTTGTAAATTTGAATTCATGTTGAAGCTTCCTTATACTAGTTCTTTCTGATTTTGAGGGTAT ATTGTATGAGTAGCAGTTAATTAATTCTGTTGATTCTAACATCCTATTGCTTTCAAACTTTCAAACGTCTAAACAGGAGT AGTATGTAGGAAACTTGATTCATGTAAGGCTGTTACCGATTACTTGGGTATTGATATGGTTTGTTGTTGATCAATTTGTA GAGTGTCCTCATTGAGGCTACGAGTGGAAACACTGGCATAGGTTTGGCATTCATGGCAGCTGCTAAAGGTTATAAACTTA TTATAACCATGCCTTCTTCTATGAGTCTAGAAAGAAGAACCATTCTTCGAGCTTTCGGAGCTGAGTTGGTGCTCACAGAC CCAGCCAGGGGTATGAAGGGAGCTGTTCAGAAGGCTGAGGAGATACGGGAAAAGACTCCCAATTCTTATATTCTTCAACA GTTTGAAAATCCTGCCAACCCAAAGGTATTTTGTGAAGGAAAATGATTCATAAACATGCGCATAGTGCAAACACCCAATA TACAGCCAAAGTGAGAAAGAAAAAGAAGAGAGAAAAAAGTAATGGATGTGATATATGATGTGATGTGATAAGAAAAGAGA GATAGAGAGAAAATTGAGTGCCTGATTGTTTGGGGTCTAAGTATCAATACTGTTTGTCAATGTGCTGTGTTTGGGGGATC AGTTGATTGAAGAGTATTTACACACTCTTTCTTGCTTCTATTTTTAGGTCCATTATGAGACCACTGGACCAGAAATTTGG AAGAGCTCCAATGGGAAGGTTGATGCTCTTGTTTCTGGGATAGGGACTGGAGGTACAATAACAGGTGCTGGGAAATATCT GAAAGAGCAGAACCCTGGTGTCAAGGTTAGGCTTTTAATTTTCTGATTGTATGTTAGTCTTTTCTAAATTTCCACCTGTT TTTCTGATTACTCTTTCTTTATTCTTTAGCTATATGGTGTTGAACCATCTGAAAGTGCAATACTGTCTGGAGGGAAACCT GGTGAGTGTTGATTTTTTTATTTTTTTTCATTCATGGCAATTGTCTCCTATTGTTACACCAGCTAGAGTATTTAGAAAAT GTCTTCCAATATCTTATTGTATCTCATATGGTCTCTTAGTACTAGTCTTCATATAAATGATGATTTGTTTTCCTGTTTGA TTAGGATTATGAATCTAATTAGTATAAATAGGGGTTAAGTGTTGTACACACCTCATGGTCTATTACATAATCTTTAATTT AAACCATCATTGGCAAATCTAATTCCTAGTTTCCTATGTTTAAAGGCATGTGTGCTCTGCCATTCATCATTACTACATGG ATAATGCATGTGCTTAATGAGAACTTGTAAACACTTGAATACTGTGTACTTGTGTGCTTACTTCTGAATTCAAAATGGTA TCTGACTACATGACCTGGCTGCTTTTACTTGATTCCTTACCTTTGCTTCCCTCCTACAATGACAAGAAAAAATAAATTCA AACAGTACATTTTATGGTTTAGATTAATCAAATGCCTGCCTCATTTTATGTATCTTTCCGCTGACAAATGCATGTTTGTT AAATGGATATAAGGCCCTCATAAGATCCAAGGAATTGGTGCTGGATTCATCCCTGGCATTTTGGACGTTGATATTCTTGA TGAAGTTGTTCAAGTAAGCCACAAACCTTTTGTTAAGTTCTTTTGTGTTCAAATAAACAGAGATTCTCTTGATTGTAAGA TAGCCTGGCGTTCTTCTATTCTTACTCCTAATATTTTTATAGCATGTTCGAATCAGATTCTATTTCCTTAGATTGAGAAG CCACTCACACAAGTTTCTCCCCATAATTGATTTTGGCTTTATAATCAATTGTATAAGGATTTCCAAACATGCACTTAATC TTTGCAAAAGAAGTCCAATGTTGCACTAAGAATACATGCAAAATGTGACAAGAGAACATAGTGTGAGCTTACAAACAAAG CAAAATACAAATTCTAATATTTGTATGTTACTATTAAGTGTTAGACTGTTGGGAATAAACTTTGAACTACTTCAAGGAAA ATGGTACTTCAATTTTAATTAACATGAGTGTGCAATCTGTCATATCTTCTCTTTCCCCTCTGCTTGGTAAAGCGGGACTA AAACAAAAAGCTTCAATTTGAAGGCAGGAAGAAGTGAGTTAGTTGACTTAATTCACTTCATGTATAAGAAAGTAACTTGT TTTTAACTGTTTTTGTAGGTTTCAAGTGAAGAAGCTGTTGAAACAGCTAAACTTCTTGCTTTGAAAGAAGGTTTACTGGT AAGTTCATATGGATTATAAAATGGACTCCTTAGTGGTCTTATCTCTCTTCTGTGTATTGGCTTTGCTTTGATGTATATCT TTTGGTTTGTGTGCTTTTGTGAAAGCGAAGAAAGGGGGACGCAGTGTTTTTAATGCAATTTTTTTCTATTCTAATTATAT TTCAGGTGGGGATATCATCTGGTGCTGCGGCTGCCGCTGCAATTAAGCTTGCAAGGAGGCCAGAAAATGATGGAAAACTC ATTGTTGTAAGTTTATCTACTTTTCATCTGGCATCATATTTTCTTTTGTTGTCAGCAGTGCTGCTTTAGGTGCAATATCA ATGTGCTTAAAAGATTTTTGAAAAGTTGTTTCTTTAATTGCTGATCATTAGAAGAAGCTTCTGGCATTAGCTATTTGAGG TTTCATTGCTATAGATGCAGTTAATGGCTCTAACTGCACACACAGTTGATGTCATTTTTGTAGATGTATAAGCACTTTAT ATATTAAGAGTACTTTAGTTGTTTTCTGATGATTGGCTGTGTGCACAACAGCAGATTTCTGATAAGCAGTATTTTCACCT GATTTTCTTGAAGCTTCCTAATAAAATGCATAATTGGAATTAAAGAGAAAATTTACTCCTTTCAATATCACTCTCTTATT ATATTTACCATGTTCAATCACTAATAAGCCCATTGAATGCCTGACTAGGTGGTCTTCCCAAGCTTTGGAGAGCGTTATCT TTCATCTGTGCTCTTTGAAGCTACCAAGCGAGAAGCAGAGAGCATGGTCTTTGAGCCTTGA
CDS sequence (LotjaGi1g1v0778700.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGAAGAGAAGACTACCATCGCTAATGATGTCACTGAATTAATTGGCAACACTCCATTGGTATATCTCAACCGTAT CGTAGATGGCTGTGTTGGTCGAATTGCTGCTAAGCTGGAAATGATGGAACCCTGCTCTAGTGTCAAAGACAGGATAGGAT ATAGCATGATTGCAGATGCTGAAGAGAAGGGGCTCATTAAACCGGGTGAAAGTGTCCTCATTGAGGCTACGAGTGGAAAC ACTGGCATAGGTTTGGCATTCATGGCAGCTGCTAAAGGTTATAAACTTATTATAACCATGCCTTCTTCTATGAGTCTAGA AAGAAGAACCATTCTTCGAGCTTTCGGAGCTGAGTTGGTGCTCACAGACCCAGCCAGGGGTATGAAGGGAGCTGTTCAGA AGGCTGAGGAGATACGGGAAAAGACTCCCAATTCTTATATTCTTCAACAGTTTGAAAATCCTGCCAACCCAAAGGTCCAT TATGAGACCACTGGACCAGAAATTTGGAAGAGCTCCAATGGGAAGGTTGATGCTCTTGTTTCTGGGATAGGGACTGGAGG TACAATAACAGGTGCTGGGAAATATCTGAAAGAGCAGAACCCTGGTGTCAAGCTATATGGTGTTGAACCATCTGAAAGTG CAATACTGTCTGGAGGGAAACCTGGCCCTCATAAGATCCAAGGAATTGGTGCTGGATTCATCCCTGGCATTTTGGACGTT GATATTCTTGATGAAGTTGTTCAAGTTTCAAGTGAAGAAGCTGTTGAAACAGCTAAACTTCTTGCTTTGAAAGAAGGTTT ACTGGTGGGGATATCATCTGGTGCTGCGGCTGCCGCTGCAATTAAGCTTGCAAGGAGGCCAGAAAATGATGGAAAACTCA TTGTTGTGGTCTTCCCAAGCTTTGGAGAGCGTTATCTTTCATCTGTGCTCTTTGAAGCTACCAAGCGAGAAGCAGAGAGC ATGGTCTTTGAGCCTTGA
Protein sequence (LotjaGi1g1v0778700.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEEKTTIANDVTELIGNTPLVYLNRIVDGCVGRIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIKPGESVLIEATSGN TGIGLAFMAAAKGYKLIITMPSSMSLERRTILRAFGAELVLTDPARGMKGAVQKAEEIREKTPNSYILQQFENPANPKVH YETTGPEIWKSSNGKVDALVSGIGTGGTITGAGKYLKEQNPGVKLYGVEPSESAILSGGKPGPHKIQGIGAGFIPGILDV DILDEVVQVSSEEAVETAKLLALKEGLLVGISSGAAAAAAIKLARRPENDGKLIVVVFPSFGERYLSSVLFEATKREAES MVFEP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 322 | 322 | 3.5E-204 | – | |
| PANTHER | 1 | 322 | 322 | 3.5E-204 | – | |
| SUPERFAMILY | 8 | 313 | 306 | 1.96E-105 | ||
| TIGRFAM | 13 | 311 | 299 | 6.8E-141 | ||
| TIGRFAM | 13 | 311 | 299 | 2.9E-135 | ||
| Pfam | 13 | 298 | 286 | 1.2E-70 | ||
| Gene3D | 14 | 306 | 293 | 1.4E-125 | ||
| CDD | 17 | 307 | 291 | 1.81279E-150 | – | |
| ProSitePatterns | 38 | 56 | 19 | - | ||
| Gene3D | 50 | 152 | 103 | 1.4E-125 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Cysteine synthase activity | Catalysis of the reaction: O3-acetyl-L-serine + hydrogen sulfide = L-cysteine + acetate. | ||
| Biological process | Cysteine biosynthetic process from serine | The chemical reactions and pathways resulting in the formation of cysteine from other compounds, including serine. |
Expression pattern of LotjaGi1g1v0778700.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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