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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0779700 |
| Transcript ID | LotjaGi1g1v0779700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ER membrane protein complex subunit 2; TAIR: AT3G04830.1 Protein prenylyltransferase superfamily protein; Swiss-Prot: sp|Q6TGY8|EMC2_DANRE ER membrane protein complex subunit 2; TrEMBL-Plants: tr|I3T0Q0|I3T0Q0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0779700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:135158269..135162711) extracted from Lotus japonicus Gifu genome v1.2.
GTATTTCTGAACCGGAACCTGACCTGAGATCCTATTGTATGTGCTGTTGTTCTACACTTTCAATCTCAACGTTTGTGTCT GTCTTTGTCTGCGAGGGTCGTAGCGCACAGACTCAGTGATAGTTCCAATCCAACAACAGATCGAAACCCCTTCTGATTCG ATTTGTTGTTCGTTGGATCTGCGAATTGGGAATCAATCAATCATGGTGACCAAAACAGAGGAAACCCAATTGAACAGGCT TGAAAACCAGGTCGATAACGCCGGCGGCGGCGCGTGGGAGTACCTCTCCCTCGTCAGGAAGCTCAAGGTTCGCCGTTCTG ATAAAGTGTTGAAGCACGGCTTGTCCATCCTCAACGACCCCAAACAACGATCATCTCTCGGCCCAGATGGTCCTTCCCTC ACTCAATTACTACTGTGTTTTCTTAATTCTGTGATTTGTTCAATGATGATTGGTTGTTGTTTCTTGATGCAGAATGGACT TTGTATGAGCAGGTTGCACTTGCAGCTATGGATACCCACTCTCTTGATGTTGCCCAGGTTCTGATCTAAATTAATTGGCT TTCATTAGTTCAATTCATCATGCATTGTAATTCACAATCCTTGCAATGAATTGTATAATCTTAACCTCCTTTTGTTGAGA TGTATGTTTGGTGGTATCAAATTTGCTTGTATGGCTGTGCTCATGTTTGATTCTAGTTTTAATGGCCACTCATTGAAATA TTTTGTGCTTATTTTATTGTCTGATTCTACCTTTACTTACTCTCTTGTATGTCACTCCTGCTATGGATGTGTTAGGTAGT TTTGCTCATGGGTTTTATAAAGAATTATGAACTTGTTTGATGCATTTTGTTTCAAGGCAGCATGATACTTGTATTGGGGT ACTTAGCCTGTAACGACGGTCTTTGATTGCCCTTCATTTTCTCGCTGGTATATTATTTGTTTTAAGTTTGAGGATGCAGA AAATAATGGCTTTCTGAATTAGATATGACATAATTTGTTTACAGTGTTTATATCATTATAGTTAAGATTTCGATGCAAGA TGTGCGATCCTGTTTGGTGAACTTTTACTTTGTCCATTGTGTTCTGTATGTTGCCGGAATTGAGCACTTGCTTGCTGCAT TTGTCTCCTTCATATTTGATGAGAAACCTTCTAGTTTGAAAATTTATGTCTTGAAGTCAATAATAATGTATTTTTTTTAT CAGGACTGTACAAAGATTCTTCGGAAGAGATTCCCGGAGAGTAAAAGAGTTGGTAAGTTGATGCTTTATAATTTTTTACT CTATGTCTTTTCATGTTATGTATTTGAGTTAGTTAAGTGAATAGCTCTACTTAAGCATGGTCATTTATTACCATGTGACT GACTTTACAGTTTACACATGACTTCACATTAGCTTAGAGGGAAAAATAATTAAAGTGGCACCATCTGAACTCAGATACAG TCCAGTTTTATAGTTCTGCTTAGATGCAAATGCAACAAATGTGTAGGTAGCATTTTACTCTGGCTAATCTGATGATATAT ACCTTTCAGTCGCCCAGCAATACTTCTCCGCATAGGTGCTCCAATATACGAGTCACCGGTAGACTAAGGAAGAATTCATT TTTAAATAGCAGCTATTGATCTAAAAGGAAATAGCAATTATTGATCTAGTGGCATTTTTTACTTGACTCCTTCCTTACAT TTAATACTTCCGGAGTTATATCTGAGCACACTAGCTCTAATGTTATTTTGTCCCAAAACACAAGCAATTACATGCCCTTC CCTGATTGTTGATGCCTAGTTCTGGTTCTAGAGACAAATTTTTAGATTAGGGGGTGACTAACTTGGATGATTTGCATTCC ATTCCTTCAAGAGGGATGCCATATAAAGTAAATACATTCACAGTTAGAAGTCCAAATAAGTTTGTTGTGCATATGCCTGT TCTCGTTCCTTTCCTGAAAAAAATTGATTTTTGGTGACTAATTGTTACAGGCAGGTTAGAGGCAATGCTGCTTGAAGCAA AAGGGTCCTGGGAAATGGCAGAAAAGGCTTACACAAGCCTTTTAGAGGATAATCCTGTTGATCAAGTAAATTCACTTAAC CTTACAGAGAAACACAAAAAGGAAATAGTTGTTTGTTGCTTATTTACTCTGTATGATGAAACCAAAAATTTATAGTAGTA ACTTCTTTTTTTGGTCTTTTATTACTTTTTTTTCCCGGAAGGCTCGTCTTTCATTAATTTGATTTGATGTATAACATTCT GTCAGTTTTGACCTTAAATAGACTAGGTTTCTTTGTAAATTGTAATGGAAGCCAAAATCTGAAACTTTTTCCTATTTGGT TGTTTTGTTTTGTGCAGACGATCCATAAGAGGAGGGTGGCTATGGCAAAGGCACAAGGCAACATTTCTGGGGCTCTTGAT TTCCTTAATAAATATCTGGAAATGTGAGACAGCTGTTGAAGTTTTGTTTTCTTTTAATTACCTTCCTTTCTGAAACAAAC GATAAAAGGAAGTTGTTGCTGTCGATGAACGTTTATTTGAATTCCTTCCTCATTTTAACAGATTCATGGCAGATCTGGAT GCATGGAGAGAATTGGCCGAAATATACAGCTCCCTGCAAATGTGAGATTTTTATTCTATTGTTTCTCTTTTCTAGGGATT TATTTAAGTTGCTAATTGTTGAGCTGCACCTGTTTATTGACTACCTATCTTCTTGTTAGGTATAAACAAGCCGCATTTTG CTATGAGGAATTGATGTTAGCACAACCTACTGTTCCTCTCTATCACTTAGCCTATGCTGATGTAAGTAATTTCTTTATGA ATTGTGATTAATATATTTTGGTCTAGTCAAAATTTCTCCCTCTCCTTGTCTCCCTTGTTTCTTTGCTCCAATAATACATA GCAAGGTACTTAACATTGCTTGCTAGAGATTACGGGAGTAACCTAGCAAGAGTGATAAAACGTAGTCTTGACATTGCGGT ATTGCCAGGTACTTTATACGATTGGTGGGTTAGAAAATCTCCAGACTGCAAAGAAATATTATGCATCCACTATTGACTTA ACTGGAGGCAAGAACACCAGAGCACTCTTTGGTATATGCTTGGTGAGATGTTTCTCCCTCTATTCCAAGTGTTTATTTTG TGTGGTTTACTGTGAATGTTCATGTATCTATGATCCAAATATAAGTTATAATTTGGATGTTGGTTGAAACTCAGTTTTAT TGGTTGCCATGAAATTAACCCTTTAGTGTATGTTTGGTTCCATGTCTGGGGGCCTTAGAATCAATTCTCATTGACTAGGT CCAGAATCACTTAGAGAATTGATTTTAGTCCCAAAATCAAAATATGCGGAGGAGATGCTAGAGAGAGTAGCTTCTGCAGT GGATATAATCAACTGTGGGATTTCATAACCGGATTTTACAACATTACCCTAGAGAAATCACTTTTTCCATAAATATATCC AAAAATAAAATCACTTCACTTTTACCATAACCAATTTTTCCAAAATCAATTTCATTCAAAATGAATTCTGACAACACTGA TTCAACACACACTTAATTCTATTTCTGATTTCCCTTCATAAATTGTTGATTTTCTTCATAACAACTTGGAATTCCTAGAT TCTTCTTTTCAAAACTATTCATTTATATGCTTGAAAATTGAGTTTTGCTCCTATTCTCCAGTGCACCTCTGCTATTGCAC AGCTTTCAAAAGGGAAGAGCAAGGAAGAGAAAGAAGGATCACAGTTACAATCTCTAGCAGCCAAAGCATTGGAGAAAGAT TACAAGCAGAGAGCTCCTGACAAGCTTCCTCAACTTACAAGTGCCTTAAAGAGTTTAACATTGTCATCATGATGATGCAG AATTTCTTGAATAGTATTGTTATGTAGTCACTTTTTGACATTTTCTTAAATTATTGCCAGCCTGATTAGAACTCCCCTTC CATTTTCTTCTCAATATCGAAATGAGAATTCACCTTGTTCTGCAATTTTACCTTCCGTAATAAGTATTTATCTAAAGACA TGTAAATTTTCAATGATGTAGACCGTTTCTGTGAATGGATAGTCATGGGTTTTGGGAGTGCAGAGTTTGCTCTATCTTGT CTTCTTTTGGCATCACAGACTGTCACATTACAGTGGCTCAACTCAACCTTGTTTTCAGCATCAAATATTTGTTTCTTTTG CTGAATAGTCTTCTCTCGTGCACGGTTTTTTTAAATATCTGTTTAATTTAATCTCTTTTATTTTATAGCATTTAGATGAG ATTCATGAATCAAATTATGTCGACATGAGTTTTATTTAGGACAATTTATTTAGATGAAACAATGAGTGACATTTCCATGA AGTAAGAGTGTCCAAGTAATTCCAACAAGTTGACTATTTTTACGTTTAGCGACCCTATTGAGTATGTGAACTAGGTGTTG AAAAGCTATAAAAATAAGAAATTGTTTGAAAAAGATATATGAG
CDS sequence (LotjaGi1g1v0779700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGACCAAAACAGAGGAAACCCAATTGAACAGGCTTGAAAACCAGGTCGATAACGCCGGCGGCGGCGCGTGGGAGTA CCTCTCCCTCGTCAGGAAGCTCAAGGTTCGCCGTTCTGATAAAGTGTTGAAGCACGGCTTGTCCATCCTCAACGACCCCA AACAACGATCATCTCTCGGCCCAGATGAATGGACTTTGTATGAGCAGGTTGCACTTGCAGCTATGGATACCCACTCTCTT GATGTTGCCCAGGACTGTACAAAGATTCTTCGGAAGAGATTCCCGGAGAGTAAAAGAGTTGGCAGGTTAGAGGCAATGCT GCTTGAAGCAAAAGGGTCCTGGGAAATGGCAGAAAAGGCTTACACAAGCCTTTTAGAGGATAATCCTGTTGATCAAACGA TCCATAAGAGGAGGGTGGCTATGGCAAAGGCACAAGGCAACATTTCTGGGGCTCTTGATTTCCTTAATAAATATCTGGAA ATATTCATGGCAGATCTGGATGCATGGAGAGAATTGGCCGAAATATACAGCTCCCTGCAAATGTATAAACAAGCCGCATT TTGCTATGAGGAATTGATGTTAGCACAACCTACTGTTCCTCTCTATCACTTAGCCTATGCTGATGTACTTTATACGATTG GTGGGTTAGAAAATCTCCAGACTGCAAAGAAATATTATGCATCCACTATTGACTTAACTGGAGGCAAGAACACCAGAGCA CTCTTTGGTATATGCTTGTGCACCTCTGCTATTGCACAGCTTTCAAAAGGGAAGAGCAAGGAAGAGAAAGAAGGATCACA GTTACAATCTCTAGCAGCCAAAGCATTGGAGAAAGATTACAAGCAGAGAGCTCCTGACAAGCTTCCTCAACTTACAAGTG CCTTAAAGAGTTTAACATTGTCATCATGA
Protein sequence (LotjaGi1g1v0779700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVTKTEETQLNRLENQVDNAGGGAWEYLSLVRKLKVRRSDKVLKHGLSILNDPKQRSSLGPDEWTLYEQVALAAMDTHSL DVAQDCTKILRKRFPESKRVGRLEAMLLEAKGSWEMAEKAYTSLLEDNPVDQTIHKRRVAMAKAQGNISGALDFLNKYLE IFMADLDAWRELAEIYSSLQMYKQAAFCYEELMLAQPTVPLYHLAYADVLYTIGGLENLQTAKKYYASTIDLTGGKNTRA LFGICLCTSAIAQLSKGKSKEEKEGSQLQSLAAKALEKDYKQRAPDKLPQLTSALKSLTLSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 295 | 294 | 9.3E-112 | ||
| Gene3D | 25 | 298 | 274 | 4.9E-20 | ||
| SUPERFAMILY | 88 | 260 | 173 | 4.22E-15 | ||
| ProSiteProfiles | 98 | 236 | 139 | 11.046 | ||
| Pfam | 144 | 207 | 64 | 3.2E-6 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0779700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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