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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0781000 |
| Transcript ID | LotjaGi1g1v0781000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ammonium transporter; TAIR: AT2G38290.1 ammonium transporter 2; Swiss-Prot: sp|Q84KJ6|AMT31_ORYSJ Ammonium transporter 3 member 1; TrEMBL-Plants: tr|I1NC92|I1NC92_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0781000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:135326350..135330731) extracted from Lotus japonicus Gifu genome v1.2.
CATCAAAACATAGAGTTGTACCACATGACCAAATCTTGATCTAACACAAACATCGACAAAAAAAGAGTCGGGTTATCTTT TGCACATTGACGATACATCAGGGGCAACAAATGCATTTAAGCCTTAACATTTTGCTATTGTAATTGGTTGGAGTACCCAT TGTACTTCCCTATTTATATCATTTTTGCTTACCTAAAAAAAAATTCATGTCTTACTTCACCGGTTGTTTGCAACTCTTAC TTCCAGCAGAACAATTAGGCTTCTCACCACGTCTTGCTCACATTTCTACCCTCCACAGGAGTCCACAGCTGAAATCAGAC ACCAAGAAGATAATGAGTGAGAATGAACGAACTATGAAGGCATACCGGTGTAGGAAATAATTCATAAATACGTACTAGAA AAAAACAAATAAAATAAACAACAACAAAAAATATGAAATAAAATCTAAAAAATAAAATAAAAGAGCTTATCAAATAAATT TCTCGTCACCACTAGGCACTAATCAATAGTCACCTCTTGTTATTTATAGCTAGTCCAAAACCATATATATTCATGATAGA TAAAACTGTTCTAGATTTGAATCAATAGATCTACAGTCTGAAATCCTATATAATCATATAAGAAACTTCTATCACCATTT TGGGTTAACTCACCCTCATGAGATCGCAATCCTTTGTCCCAGCCATTACAACAAGTGTGTCACCCTAAAACAACAGACTA TGCAAGGTACTTGATTCATTGGTTTTTTCACATATGAATAACTTTCTGACAAGCTCAAGGGAACTAGATAGTATATAGAA ACTTAAGGAAATAGAAAGAGTTGCAGTTTTCAAATCCTACTTCTCAAAACTGACCAGCCCCGGCCCCCGGCCCCCGGCCC TTTATTTATATATATATTTTTCCCTTAAGATCCACAATAAGTGGCAATAAAAAAGTAGACTTGGTCATATATTTTTAATT GTGGAGCACTTCCCTTAAGTTCTGGCTGCAACGTTTAAAAAACAAACAATATACAATTAGGTTTCTGAGCATGAAACTCG GTCATAGTTTGTTAAGAAGAATAGAGATCCAAATGACCAGCACCCATAGACCATAATAGTTTTTTTTTTTTTTAAGCTGA CCACAAATAAAATCAAAGAGTTGGATTTAATTAATTGGTAAAAATATTTATTTATGCACATTGAGGTCCAAAAGATTTTT CTTAGTAAAATGAAAATACATATATTTGACTCTATTATGTTGCATACCAACGAAATGAAACAAAATTATAAGTTTAGCAT TAAAATATTTTCATGTAAAATATTCATACCCCATAATTTGAAATATTCTCTCATGACATGTTTTCACATTAATATTTACT CCAAGAGTAAGAAGTATATTTCTATTAGTTTCGCAATATTTTTTCATGTAAAATGTTCATCTCGTGAGAGTTTTTTACTA ATATTTGTCATTCTTATGATAATGACACAGTCGTCCACCACATTAATGACTTGTTGAAAAAAAAACAAATCAGAACAATA GAAAAAAAAAAGTACCATGAAACTAAATTCAGAAATAAACAACCTAAATCCTAACCAAATCTATAATTCAAAAAGTACTA ATTAAAGATAGATAAAAACTATCAAAATCTAACAAATTAAAACAAAAACTTATAAAATCCGGAAATAAATAAAAAACCAA AAATTAAATAAAAATACCCTAAAAACTAACTAAAACTCAAAAATTAAATTTAAAATAAAATAAAAGACCGACAAAAAAAC TCTTATATCCCCGAATCAACACCTATTTATCAATTATGTGTCTGGTGAAGTAACAAGTTCCTAATCAATACTCACTTAAC TATAGCATATGACAGAGATCAATGTGTGATTAATGAAGAAAATTCAAACTTTCTCGTCTGCCAAGTGCCAACAAAGCCGG CGTCCTCCGGTACTCACACAAAGAAAATGCAAACGACAAATTGGCATGCAGCCACATGCCTGCCAAAAAAACATAACAAT ATGATCATTAGTATCTTTTCTTTCATCATCTACAAGCATTACAATTGATTCTCACTTGAGTGTGCTTGGAGCTTTTCTTC CACAAATAAACACAGTACTGGTATTTAGTTAACATACGCAACATAACATATACATATACGAGTAATTCAACATGGCACTT CCTTCAAACCTATTACCGGATGAGGCAAGCCCGGAGTGGCTGAACAAAGGGGACAATGCGTGGCAGCTCACAGCTGCTAC ACTGGTTGGCCTCCAGAGCATTCCTGGGCTCGTGATCCTATACGGAAGCCTGGTGAAGAAGACATGGGCTGTGAACTCTG CTTTCATGGCCTTCTACGCCTTTGCCATGGTTCTCCTATGCTGGGTGGCGTGGGGTTTCTGCATGTCGTTTGGCGAGAAA CTCGTTTTCTTCTTGGGAAAACCTGGGGTGGCATTGGATGAGAATTTCCTCTTAGGGAAAGCTTTCTTGGGGATGTTCCC CAATGCTACTATGGTGCTTTTTCAAGGCGTGTTTGCAGGAATTACGTTGATCTTGATAGCCGGTGCGTTGCTTGGAAGGA TGAACATTCGCGCGTGGATGATGTTTGTTCCACTTTGGGTTAGTTTGTCGTATAGTGTCACTGCGTTTAGCATTTGGTGC CCTGATGGGTGGTTGGCGAAGCTTGGTGTCATTGATTTTGCTGGCGGTTATGTTATTCACCTCTCTGCTGGAGTTGCTGG TTTCACTGCAGCTTATTGGGTAACTAAGCATCTACTTTCGATCACACATGCATACAATTGGCATGCATGTTAGTGGTGAT TTTTAATTCTCACAAACATTAGCGGCCGCTTACTTGCCATTTATTCAAGTAAGCGATCACTAATGTCTGTGAGGATTAAA AATCATTATTGTATGTTAATTGTATGGCCCAAAAACCTATGTTCAAGAATCATTGTCGTTTACATGTGATGGTGTTTAAC CAGGTTGGTCCACGGCCAGAGAAGGAGAGAGAAATGTTTCCAGCAAACAACATGATTTTAGTGCTTGCGGGCGCTGGCCT GCTTTGGATGGGTTGGAGTGGATTTAACGGTGGAGCTCCCTTCGCGGCTAGCACAGTGGCATCGCTGGCTATTCTCAACA CACACGTATGTACCTCCGCTAGCATTGTTGTGTGGGTTCTGCTCGACACTTTCTACTTTGGCAAACCCACTGTTTTTGGT GCAGTACAGGGCATGATCACTGGCCTTGTTTGCATTACACCCGCCGCAGGTAACTCATACACCTATTTAGTGAAGTGAAT TTGGGTTCCAGAGCACGGGTTGAGTTGGTTAAAATACAACTCGAATAGATTATGAACTCGTCTAACATGATTTAATAATT TGTTGAAATTCATGAATATTTTTTATTAGTAAAATACACTTAAATTTTAATCAATCAATAAAAGAGTGTTAGAGATAATA TTGTAAAGATGTGTTGCGATTTTTCATTTTGATATGAAGGAAGTACTAAATTGTTCAATCAAAACACTAAACTTAATTTT TTTTTTTTAAATCAATCAAATATTTAAATTGGACATGAAAGTAACAATTTTGTGAACTGAATTGAATAGGAGTTGTGCAG GGGTGGGCAGCGATCTTGATGGGTTTGATTTCAGGAAGCATTCCCTGGTACACCATGATGATACTCCACAACAAGGTCCC TTTCTTAAAGCAAATTGACGACCCCATGGCGGTGTTCCACACCCACGCCGTAGCCGGGGCTCTCGGCGGCATTCTCACCG GCTTCTTCGCCGTGCCTAAGCTATGCCGTCTCTTCTACATGGTGCCTGATTGGGAAAAGTACATTGGCCTCGCCTATGGC CTCCAGAACGGTGCAACTCAAGCGGGGTTGAAACAGATGGGGATCCAAGTTGTGGCCATTGTTTTCGTGATTTGCTTCAA CTTTGTCTCCACTACCTTGATTTGCTTGCTTGTGAGGTTAATGGTTCCACTCAGGCTTGATTCTGATGAGTTGCAAGGTG ACAAGGCAATGCATGGAGAGGAGGCTTTCAACTTGCATGGTGGTGGTGGTGATCATCATGCTGTGAAATTTGAGAAGGTG AAGCATAATAAGGTTTATGACACTCCAGAATTTTCATTCATTAACGAGTCAACGTCGTCAGTTTTTGTCAACCTTCAAAT GGTGTGAAATCATCAATGTATATCAACCAAAATGTTATGCATCATGTCTAATAAACGTTGGAAGTCATCATGTTCAGCAT CACTGTGAAAGGAATTCAAAGTGTCATTACACATTAATGATGAATCTGGATTTACTCATTTGTACATATACCTTTCGAAA AATAAGGCTCGATAAGAGGGCATGTTTGGTTTCAATTTTAGTATTACTAAACATAATCTAAG
CDS sequence (LotjaGi1g1v0781000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCACTTCCTTCAAACCTATTACCGGATGAGGCAAGCCCGGAGTGGCTGAACAAAGGGGACAATGCGTGGCAGCTCAC AGCTGCTACACTGGTTGGCCTCCAGAGCATTCCTGGGCTCGTGATCCTATACGGAAGCCTGGTGAAGAAGACATGGGCTG TGAACTCTGCTTTCATGGCCTTCTACGCCTTTGCCATGGTTCTCCTATGCTGGGTGGCGTGGGGTTTCTGCATGTCGTTT GGCGAGAAACTCGTTTTCTTCTTGGGAAAACCTGGGGTGGCATTGGATGAGAATTTCCTCTTAGGGAAAGCTTTCTTGGG GATGTTCCCCAATGCTACTATGGTGCTTTTTCAAGGCGTGTTTGCAGGAATTACGTTGATCTTGATAGCCGGTGCGTTGC TTGGAAGGATGAACATTCGCGCGTGGATGATGTTTGTTCCACTTTGGGTTAGTTTGTCGTATAGTGTCACTGCGTTTAGC ATTTGGTGCCCTGATGGGTGGTTGGCGAAGCTTGGTGTCATTGATTTTGCTGGCGGTTATGTTATTCACCTCTCTGCTGG AGTTGCTGGTTTCACTGCAGCTTATTGGGTTGGTCCACGGCCAGAGAAGGAGAGAGAAATGTTTCCAGCAAACAACATGA TTTTAGTGCTTGCGGGCGCTGGCCTGCTTTGGATGGGTTGGAGTGGATTTAACGGTGGAGCTCCCTTCGCGGCTAGCACA GTGGCATCGCTGGCTATTCTCAACACACACGTATGTACCTCCGCTAGCATTGTTGTGTGGGTTCTGCTCGACACTTTCTA CTTTGGCAAACCCACTGTTTTTGGTGCAGTACAGGGCATGATCACTGGCCTTGTTTGCATTACACCCGCCGCAGGAGTTG TGCAGGGGTGGGCAGCGATCTTGATGGGTTTGATTTCAGGAAGCATTCCCTGGTACACCATGATGATACTCCACAACAAG GTCCCTTTCTTAAAGCAAATTGACGACCCCATGGCGGTGTTCCACACCCACGCCGTAGCCGGGGCTCTCGGCGGCATTCT CACCGGCTTCTTCGCCGTGCCTAAGCTATGCCGTCTCTTCTACATGGTGCCTGATTGGGAAAAGTACATTGGCCTCGCCT ATGGCCTCCAGAACGGTGCAACTCAAGCGGGGTTGAAACAGATGGGGATCCAAGTTGTGGCCATTGTTTTCGTGATTTGC TTCAACTTTGTCTCCACTACCTTGATTTGCTTGCTTGTGAGGTTAATGGTTCCACTCAGGCTTGATTCTGATGAGTTGCA AGGTGACAAGGCAATGCATGGAGAGGAGGCTTTCAACTTGCATGGTGGTGGTGGTGATCATCATGCTGTGAAATTTGAGA AGGTGAAGCATAATAAGGTTTATGACACTCCAGAATTTTCATTCATTAACGAGTCAACGTCGTCAGTTTTTGTCAACCTT CAAATGGTGTGA
Protein sequence (LotjaGi1g1v0781000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALPSNLLPDEASPEWLNKGDNAWQLTAATLVGLQSIPGLVILYGSLVKKTWAVNSAFMAFYAFAMVLLCWVAWGFCMSF GEKLVFFLGKPGVALDENFLLGKAFLGMFPNATMVLFQGVFAGITLILIAGALLGRMNIRAWMMFVPLWVSLSYSVTAFS IWCPDGWLAKLGVIDFAGGYVIHLSAGVAGFTAAYWVGPRPEKEREMFPANNMILVLAGAGLLWMGWSGFNGGAPFAAST VASLAILNTHVCTSASIVVWVLLDTFYFGKPTVFGAVQGMITGLVCITPAAGVVQGWAAILMGLISGSIPWYTMMILHNK VPFLKQIDDPMAVFHTHAVAGALGGILTGFFAVPKLCRLFYMVPDWEKYIGLAYGLQNGATQAGLKQMGIQVVAIVFVIC FNFVSTTLICLLVRLMVPLRLDSDELQGDKAMHGEEAFNLHGGGGDHHAVKFEKVKHNKVYDTPEFSFINESTSSVFVNL QMV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 475 | 475 | 4.4E-276 | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| PANTHER | 1 | 475 | 475 | 4.4E-276 | – | |
| Gene3D | 6 | 457 | 452 | 6.3E-121 | ||
| SUPERFAMILY | 16 | 421 | 406 | 5.1E-96 | – | |
| TIGRFAM | 21 | 437 | 417 | 3.0E-105 | ||
| Phobius | 23 | 47 | 25 | - | – | |
| Pfam | 23 | 438 | 416 | 2.1E-79 | ||
| TMHMM | 26 | 48 | 23 | - | – | |
| Phobius | 48 | 58 | 11 | - | – | |
| TMHMM | 53 | 75 | 23 | - | – | |
| Phobius | 59 | 81 | 23 | - | – | |
| Phobius | 82 | 114 | 33 | - | – | |
| TMHMM | 112 | 134 | 23 | - | – | |
| Phobius | 115 | 134 | 20 | - | – | |
| PRINTS | 118 | 134 | 17 | 3.7E-6 | ||
| Phobius | 135 | 140 | 6 | - | – | |
| TMHMM | 141 | 163 | 23 | - | – | |
| Phobius | 141 | 162 | 22 | - | – | |
| Phobius | 163 | 176 | 14 | - | – | |
| TMHMM | 173 | 195 | 23 | - | – | |
| ProSitePatterns | 175 | 200 | 26 | - | ||
| Phobius | 177 | 198 | 22 | - | – | |
| Phobius | 199 | 209 | 11 | - | – | |
| TMHMM | 208 | 230 | 23 | - | – | |
| Phobius | 210 | 230 | 21 | - | – | |
| PRINTS | 214 | 232 | 19 | 3.7E-6 | ||
| Phobius | 231 | 235 | 5 | - | – | |
| Phobius | 236 | 261 | 26 | - | – | |
| TMHMM | 240 | 262 | 23 | - | – | |
| PRINTS | 245 | 267 | 23 | 3.7E-6 | ||
| Phobius | 262 | 272 | 11 | - | – | |
| Phobius | 273 | 291 | 19 | - | – | |
| TMHMM | 283 | 305 | 23 | - | – | |
| Phobius | 292 | 296 | 5 | - | – | |
| Phobius | 297 | 317 | 21 | - | – | |
| PRINTS | 300 | 318 | 19 | 3.7E-6 | ||
| Phobius | 318 | 337 | 20 | - | – | |
| TMHMM | 331 | 353 | 23 | - | – | |
| Phobius | 338 | 361 | 24 | - | – | |
| Phobius | 362 | 387 | 26 | - | – | |
| Phobius | 388 | 413 | 26 | - | – | |
| TMHMM | 395 | 417 | 23 | - | – | |
| Phobius | 414 | 483 | 70 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ammonium transmembrane transporter activity | Enables the transfer of ammonium from one side of a membrane to the other. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals. | ||
| Biological process | Ammonium transport | The directed movement of ammonium into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Ammonium is the cation NH4+ which is formed from N2 by root-nodule bacteria in leguminous plants and is an excretory product in ammonotelic animals. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Ammonium transmembrane transport | The process in which ammonium is transported across a membrane. Ammonium is the cation NH4+. |
Expression pattern of LotjaGi1g1v0781000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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