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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0784800 |
| Transcript ID | LotjaGi1g1v0784800.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cell division cycle 5-related protein; TAIR: AT1G09770.1 cell division cycle 5; Swiss-Prot: sp|P92948|CDC5L_ARATH Cell division cycle 5-like protein; TrEMBL-Plants: tr|A0A072U4G1|A0A072U4G1_MEDTR Cell division control protein, putative; Found in the gene: LotjaGi1g1v0784800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:135736852..135742799) extracted from Lotus japonicus Gifu genome v1.2.
CTTAGATAAACCTTTCCAGAGAGTGAAGGGGGAAAGAGGGGGCGTCTCTGCATTTCATTTCAAACACCATAAATCGGAGG ACGACGACGGTCGCTGTTTGCTGCGGCCGCCGTACTACACACTCAACGCTCTGCATTGAGATATTCCTGTTTTCCATCAT CATCTTCTTCGTTTTTCGCGAGCTCAGAAAACTAACCCTAGAAAAATAGAGAGAGAGTGGGTTCAGAAACCCTAACAAAA AACGTGCGAAGATGAGGATTATGATCAAGGGCGGTGTTTGGAAGAACACCGAAGATGAAATCCTCAAAGCTGCTGTTATG AAATATGGTAAGAATCAGTGGGCTCGAATCTCTTCCCTTCTCGTTCGTAAATCTGCCAAACAGTGCAAAGCTCGTTGGTA CGAGTGGCTCGATCCTTCCATCAAAAAGGTTAGGTTCTCTCTTTTTTCCCGATTCTGCTAGCATCTGTGAAAGTTGAAAT TCCAGTGTCGAATGAGAATTGAATTTAGGGTTAATTGGTTGATTTTGTGTTTTTTTTTTATTGTAGACTGAGTGGACTAG AGAAGAGGATGAGAAACTGCTGCATCTTGCGAAGCTTATGCCGACGCAATGGAGAACAATTGCTCCGATTGTTGGCCGTA CGCCTTCGCAGTGTCTTGAACGGTATGAGAAACTGCTTGATGCTGCTTGTGTGAAGGATGATAATTATGAGCCGGGTGAT GATCCGCGGAAACTGCGTCCTGGGGAGATTGATCCGAATCCTGAGTCGAAGCCTGCGCGTCCTGATCCGGTTGATATGGA TGAGGATGAGAAGGAGATGCTTTCTGAAGCGCGAGCTCGGTTAGCGAATACTAAAGGGAAGAAAGCTAAAAGGAAAGCTA GGGAGAAGCAACTCGAGGAAGCTAGGAGGCTTGCTTCTTTGCAGAAGAAGAGAGAACTGAAGGCTGCTGGAATTGATATT AGGCAGCGGAGGAGGAAAAGGAGAGGGATAGACTATAATGCTGAAATTCCCTTTGAGAAGAGGCCTCCTCCTGGGTTTTT TGATGTCGCTGATGAAGATAGACCTGTGGAACAGCCCAAGTTCCCTACTACAATTGAAGAGCTTGAGGGAAAAAGAAGGG TTGATGTTGAAGCACAGCTAAGAAAGCAAGACATTGCCAAGAATAAAATTGCTGAGAGGCAAGATGCTCCGTCTGCTATT CTACACGCCAACAAGCTGAATGACCCTGAAACAGTAAGGAAAAGATCAAAACTGATGCTTCCACCACCCCAGATTTCTGA CCATGAATTGGATGAGATTGCAAAGTTGGGTTATGCCAGTGACCTTGCAAGCAGTGAGGAACTCACAGAAGGTAGTAGTG CTACGCGTGCTCTTCTAGCTAATTATGCACAAACCCCCAGCCAAGGAATGACACCTTTAAGAACTCCTCAGAGAACACCA GTTGGTAAAGGAGATGCTATCATGATGGAAGCTGAAAATCTAGCCAGGTTGAGGGAGTCTCAGACACCATTGTTAGGAGG AGATAACCCAGAGTTGCATCCTTCAGATTTTTCTGGGGTCACTCCTAAGAAAAAGGAAATTCTGACTCCAAACCCAATGC TGACTCCCTCTGCAACTCCTGGAAGTGCAAGCCTTACTCCCAGAAGTGGTATGACACCATCAACTTCAAGGGATGGCTTT TCTGTTGGCATGACTCCAAAGGGAACCCCGCTTAGGGATGAGCTACATATTAATGAAGACATGGATATGCATGAAAGTGC TAAACTTGAGCTACGGAGACAAGCTGATATGAGAAGAAGTTTGCGCTCTGGTTTAAGCAGCCTTCCACAGCCAAAAAATG AGTACCAGATAGTGATGCAACCAGTTCCAGAAGATGTTGATGAACCTGAGGAGAAGATTGAAGAGGACATGTCTGATAGA ATGGCTAGGGAGAAGGCAGAAGAAGAGGCACGGCAACAGGCATTACTTAGAAAACGATCAAAAGTACTTCAAAGGGGACT TCCTAGGCCTCCTGCTGCATCTTTGGAGCTTATTAGAAACTCCTTAATAAGAGCTGATGGGGACAAGAGTTCATTTGTTC CACCAACCTCTATTGAGCAAGCTGATGAGATGATAGGAAAAGAGCTCCTAACTTTATTGGATCATGACAATGCTAAGTAT CCACTCGATGAGACAGCGAGTAAGGAGAAGAAAAAAGGAGCCAAGCATGTAGCAAATGGGCCTGCTGTCCCTATGATAGA AGATTTTCAGGATGATGAATTGAAAGATGTATGTGTTCACTAAAGCACACACACACACACATAAACACGCGCACACACCC CTAGATATATATATATGTATATATATATATATGTATGTATGTATATATATATATCTGTGTTTGTGGGTGTATGTGCGTGT GTTCATTTGCCGGATATGATGGTACAAACTTTTAAAAGTAGCTGTTGATTTTGATGTTATTCCGCTTTAATCTTGACTAT GGTATAATTAGAGTTGAGCTCTTAAGTGGGTGGTTGATAATATCTATATTGCTTGCTATTTATTTATATGTTGTTCTTGA CAGGCTGATCATCTGATAAAGGATGAAGCTCAGTATCTCCGTGTGGCAATGGGGCATGAAAGTGATTCCCTTGACGATTT TGTTGAAGCTCATACAACTTGCATTAATGATTTAATGTACTTTGTCACCCGTAATTCTTATGGTCTATCAAGTGTTGCTG GAAACATGGAAAAGCTAGCTGCCTTGCAGAATGAATTTGAGAATGTGAGAAGCAAGTTGGAGGATGGTAAGGAGAAGATG GTGCGCCTCGAGAAGAAGGTGACAGTGCTCACTCAAGGCTACGAGGTATGTTATTGCTATCCTGCATGTAAAATCTGAAT TTGCTTTTACTTGCAGTGTTCCCTTGATATTGTTGTTACTTTTCCCGTCTAATTCCTTGGATACCAGTTGATGTGGTCTT TTTCTTGTTTAAGAATAGGCTTGCAGTAAATTTACTAATATATAACCACCTTATCAGTTGTTTGGTGCTAACTTAGTATT GGATAACATTATCCATCAAATATCTCTTATCCACAAAAATGATGAAAATAACTTAATCAAGTCAAGAATGAGATTTACTT AACTAGGTTTTAATGTATAAACTCGTATAAAAACTTCCCAATTACAAAGACCTATGAACCATATCGCTTTCTGAATATGT TAGCATGCATAAGCGCCAACAATTTGCCTTCCCAATTTATACTTGATCAGCTGTGGGGCGATTCACATTTGTTCCAGCGT ATAGAGGGCCAGCTAGAATGGGTTATGAGTGTAGGGTTTAGGGTTTAGGTTGGGTTGGGTTAGTTGGAATTAAGCTCTTG CACTTCAGCTTACTTTTGGACCTATTTGACTCTCTGGTAGTATTTAATTTGAGGGCTGGTTGGAATTTGCTCTGATGACA ACCGGAGCTGTTGTTATAAAACTAATGTATTTTAAAAAATGAATCTTTTTTAAACTAGTGTTGTGATTTTGTTTAGATTA TATAGTATACCTTTTTTCATATTATAATATTTATAATATTTACAACAAATTGAATCAATGTCATATTTTCTAATAATATT TTTTGGTAAAGTGCTTAACTATACATATAAACAATATAGAATACTAGAATAAAATTAGATTGTACTACATAGATAATAAA GAATAGTGCACGTGACTAATAGATGTTTAGATTGTCTAGAGTACTCTTATTGAAGTTTTGTTAATATGTATGTACAGACC TTATATTTTAGTTGGTTGTATCTAGTGGTATTTTTTTCTCTAAAAAGTTATTACATTGTAGATAAATACAGTATCATTTT AAATGAAGGGTATTTTAGTGAAGGTGTTAATATATCGTAACCAATGATATACAGTATATACCCAAACATAGAATAGTATT ATTATCTTATACAATACTATCTAATATGATGTCACACTAAACACTAGTATTGTAATTATATGAGGCCTTATACTATTCGA CCTCATCCTATTATGCATACTGGACAAGCCCTTGGGTTTAAGTGATTTTGGATAAAAGTGTCAGGACCAAAGAAAGTTAT GTTGCAACTTAGTTATGGCAGTGAAGGAAATATAAACTTGTCCAAGTTTATTCAAACCCGCTCGTCTATAAATGTGCGAG CAGACACATAGAAGATATCTGTTTGCTATTGTAAGGAATTGGAAGTACATTATCTGTTTGTCCTCATGTTGTCTATTCAA CAAAGTTACTTTTTTTACCCACAGGGGCTTATCATGTTGGAAAATATTGTCTAGTATATTTATTTATTTGACTGCTTATA CTTTGGCTATTGCATTTTCAGATGAGGGCAAAAAAAAGTCTTTGGCCGCAAATTGAGGCCACTTTCAAGCAAATGGACAT AGCTGCAACAGAATTTGAGTGTTTTCAAGCTTTGCAAAAGCAGGAGCAATTAGCAGCAACTCACAGGATAAACAATATTT GGGCTGAAGTACAAAAGCAAAAGGAACTGGAGAAAACCTTACAAAAGAGATATGGGGATAATATGGCAGAGTTGGAAAGG ATACAAAATATTATGGACCAGTTCAGGTTACAAGCACAACAGCAAGAAGAAATTGAAGCACAAAACCATGCACTCGAGTC CTCTGAAGCCGCAGCTGATAAAATTGATGTGCAGGGTACAGAGAATCATGAAGCCGCGCCCCTCTCAGTTGACCAGCAAG TAGACATTGTGCAAGATCAGGTTATTTCTAGCTCCATAAATGATATGGATGTGGACTCTTGTAAGGAAGATAAGGCGCAC AACACTGACATTAAGTTGCCAGATGTACCTGCTGCAGCGGATGACAGTGGAAACGTGGCAGAAGGTAATAACATTGACAA CAGAGAGATCACACTAGATAAGAGCGTTGCAGTGGAAATTGGCAGTATTCAGGCAAATGGGAAGGATAGAGATGTGGAGA ATCCAGATGAGGTTGTGAATGCTGTAGTTGACAAACCGGATGAGGATGTGAAGGCTGTAGACCAACCTGATAGCACAAGA GAAACCACCCTTGATGAGGGGGATAACATACAAGTTGCTGATGGTAAAAGGGAGGAGGTAAATTAGTTCGGAGATTGCAT CTGGAAGTTCTAACATTGAAGTTTTGGGGCATCAGATTGGGGAGTTGTTGCTCAATCCAAATTTCGATGAGTCATTATCC AAATGGAAACTTAGTCCTTCCTTATGGGGACGGTCATCAGAAAAAAATTGCAATGATTTATATGATCAGCTGATAAACAC AGAATGTTGAGATGGTTCCTGTTTCTGGCAATTTTGTTATTGTTATTATCACCAAGTGGATATTGGCGATATGCTCTTTT AGACTTTTACATGCTTGATGTAGAGCATAGGATTTTGTCAATGAGTTAGATTTTATTGTCCACGCCTCTTAAAACCCTTT ATATGGAAAACTATAAAGCTCTTTTCTTTGCCATGGATGAATCCTGTTTCAGCTTGAACTGCAAATGTCTGATGAAGGTG ATGTGATGCAAATGTATGTCCGAGTGGCGAGTGAGAAACTTAGAGACTACACACCCAAACTCACTAACCACATTTTATTT AAGAATGTTACATATTGCATTCCATGAAAACCTCATAAAAGATACAATAATTTTATTTTCTCTAATGTTGTATCGTTAAT TATGTTTTCATACATGAACGATTATGTAACTGTTGGGTTAATAAATCTTGAGGTTTCATTGTCAAGCTGAGACAAGATAT TGTAAACAATATACTGTTCTTTTATTAATGAAACCATTCATGCACAACTAATATTTCAACATGGTTTACCTAACTATGCG TCTAGTTATAACAATGATGCGCATGATGTAGAGACTAACCATGCATCACGAACACGAACAAAGGTCAATGCAAACTCAGA GCAGACCATTCAAACAAGTGAACTCATT
CDS sequence (LotjaGi1g1v0784800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGATTATGATCAAGGGCGGTGTTTGGAAGAACACCGAAGATGAAATCCTCAAAGCTGCTGTTATGAAATATGGTAA GAATCAGTGGGCTCGAATCTCTTCCCTTCTCGTTCGTAAATCTGCCAAACAGTGCAAAGCTCGTTGGTACGAGTGGCTCG ATCCTTCCATCAAAAAGACTGAGTGGACTAGAGAAGAGGATGAGAAACTGCTGCATCTTGCGAAGCTTATGCCGACGCAA TGGAGAACAATTGCTCCGATTGTTGGCCGTACGCCTTCGCAGTGTCTTGAACGGTATGAGAAACTGCTTGATGCTGCTTG TGTGAAGGATGATAATTATGAGCCGGGTGATGATCCGCGGAAACTGCGTCCTGGGGAGATTGATCCGAATCCTGAGTCGA AGCCTGCGCGTCCTGATCCGGTTGATATGGATGAGGATGAGAAGGAGATGCTTTCTGAAGCGCGAGCTCGGTTAGCGAAT ACTAAAGGGAAGAAAGCTAAAAGGAAAGCTAGGGAGAAGCAACTCGAGGAAGCTAGGAGGCTTGCTTCTTTGCAGAAGAA GAGAGAACTGAAGGCTGCTGGAATTGATATTAGGCAGCGGAGGAGGAAAAGGAGAGGGATAGACTATAATGCTGAAATTC CCTTTGAGAAGAGGCCTCCTCCTGGGTTTTTTGATGTCGCTGATGAAGATAGACCTGTGGAACAGCCCAAGTTCCCTACT ACAATTGAAGAGCTTGAGGGAAAAAGAAGGGTTGATGTTGAAGCACAGCTAAGAAAGCAAGACATTGCCAAGAATAAAAT TGCTGAGAGGCAAGATGCTCCGTCTGCTATTCTACACGCCAACAAGCTGAATGACCCTGAAACAGTAAGGAAAAGATCAA AACTGATGCTTCCACCACCCCAGATTTCTGACCATGAATTGGATGAGATTGCAAAGTTGGGTTATGCCAGTGACCTTGCA AGCAGTGAGGAACTCACAGAAGGTAGTAGTGCTACGCGTGCTCTTCTAGCTAATTATGCACAAACCCCCAGCCAAGGAAT GACACCTTTAAGAACTCCTCAGAGAACACCAGTTGGTAAAGGAGATGCTATCATGATGGAAGCTGAAAATCTAGCCAGGT TGAGGGAGTCTCAGACACCATTGTTAGGAGGAGATAACCCAGAGTTGCATCCTTCAGATTTTTCTGGGGTCACTCCTAAG AAAAAGGAAATTCTGACTCCAAACCCAATGCTGACTCCCTCTGCAACTCCTGGAAGTGCAAGCCTTACTCCCAGAAGTGG TATGACACCATCAACTTCAAGGGATGGCTTTTCTGTTGGCATGACTCCAAAGGGAACCCCGCTTAGGGATGAGCTACATA TTAATGAAGACATGGATATGCATGAAAGTGCTAAACTTGAGCTACGGAGACAAGCTGATATGAGAAGAAGTTTGCGCTCT GGTTTAAGCAGCCTTCCACAGCCAAAAAATGAGTACCAGATAGTGATGCAACCAGTTCCAGAAGATGTTGATGAACCTGA GGAGAAGATTGAAGAGGACATGTCTGATAGAATGGCTAGGGAGAAGGCAGAAGAAGAGGCACGGCAACAGGCATTACTTA GAAAACGATCAAAAGTACTTCAAAGGGGACTTCCTAGGCCTCCTGCTGCATCTTTGGAGCTTATTAGAAACTCCTTAATA AGAGCTGATGGGGACAAGAGTTCATTTGTTCCACCAACCTCTATTGAGCAAGCTGATGAGATGATAGGAAAAGAGCTCCT AACTTTATTGGATCATGACAATGCTAAGTATCCACTCGATGAGACAGCGAGTAAGGAGAAGAAAAAAGGAGCCAAGCATG TAGCAAATGGGCCTGCTGTCCCTATGATAGAAGATTTTCAGGATGATGAATTGAAAGATGCTGATCATCTGATAAAGGAT GAAGCTCAGTATCTCCGTGTGGCAATGGGGCATGAAAGTGATTCCCTTGACGATTTTGTTGAAGCTCATACAACTTGCAT TAATGATTTAATGTACTTTGTCACCCGTAATTCTTATGGTCTATCAAGTGTTGCTGGAAACATGGAAAAGCTAGCTGCCT TGCAGAATGAATTTGAGAATGTGAGAAGCAAGTTGGAGGATGGTAAGGAGAAGATGGTGCGCCTCGAGAAGAAGGTGACA GTGCTCACTCAAGGCTACGAGATGAGGGCAAAAAAAAGTCTTTGGCCGCAAATTGAGGCCACTTTCAAGCAAATGGACAT AGCTGCAACAGAATTTGAGTGTTTTCAAGCTTTGCAAAAGCAGGAGCAATTAGCAGCAACTCACAGGATAAACAATATTT GGGCTGAAGTACAAAAGCAAAAGGAACTGGAGAAAACCTTACAAAAGAGATATGGGGATAATATGGCAGAGTTGGAAAGG ATACAAAATATTATGGACCAGTTCAGGTTACAAGCACAACAGCAAGAAGAAATTGAAGCACAAAACCATGCACTCGAGTC CTCTGAAGCCGCAGCTGATAAAATTGATGTGCAGGGTACAGAGAATCATGAAGCCGCGCCCCTCTCAGTTGACCAGCAAG TAGACATTGTGCAAGATCAGGTTATTTCTAGCTCCATAAATGATATGGATGTGGACTCTTGTAAGGAAGATAAGGCGCAC AACACTGACATTAAGTTGCCAGATGTACCTGCTGCAGCGGATGACAGTGGAAACGTGGCAGAAGGTAATAACATTGACAA CAGAGAGATCACACTAGATAAGAGCGTTGCAGTGGAAATTGGCAGTATTCAGGCAAATGGGAAGGATAGAGATGTGGAGA ATCCAGATGAGGTTGTGAATGCTGTAGTTGACAAACCGGATGAGGATGTGAAGGCTGTAGACCAACCTGATAGCACAAGA GAAACCACCCTTGATGAGGGGGATAACATACAAGTTGCTGATGGTAAAAGGGAGGAGGTAAATTAG
Protein sequence (LotjaGi1g1v0784800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQ WRTIAPIVGRTPSQCLERYEKLLDAACVKDDNYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLAN TKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRQRRRKRRGIDYNAEIPFEKRPPPGFFDVADEDRPVEQPKFPT TIEELEGKRRVDVEAQLRKQDIAKNKIAERQDAPSAILHANKLNDPETVRKRSKLMLPPPQISDHELDEIAKLGYASDLA SSEELTEGSSATRALLANYAQTPSQGMTPLRTPQRTPVGKGDAIMMEAENLARLRESQTPLLGGDNPELHPSDFSGVTPK KKEILTPNPMLTPSATPGSASLTPRSGMTPSTSRDGFSVGMTPKGTPLRDELHINEDMDMHESAKLELRRQADMRRSLRS GLSSLPQPKNEYQIVMQPVPEDVDEPEEKIEEDMSDRMAREKAEEEARQQALLRKRSKVLQRGLPRPPAASLELIRNSLI RADGDKSSFVPPTSIEQADEMIGKELLTLLDHDNAKYPLDETASKEKKKGAKHVANGPAVPMIEDFQDDELKDADHLIKD EAQYLRVAMGHESDSLDDFVEAHTTCINDLMYFVTRNSYGLSSVAGNMEKLAALQNEFENVRSKLEDGKEKMVRLEKKVT VLTQGYEMRAKKSLWPQIEATFKQMDIAATEFECFQALQKQEQLAATHRINNIWAEVQKQKELEKTLQKRYGDNMAELER IQNIMDQFRLQAQQQEEIEAQNHALESSEAAADKIDVQGTENHEAAPLSVDQQVDIVQDQVISSSINDMDVDSCKEDKAH NTDIKLPDVPAAADDSGNVAEGNNIDNREITLDKSVAVEIGSIQANGKDRDVENPDEVVNAVVDKPDEDVKAVDQPDSTR ETTLDEGDNIQVADGKREEVN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 807 | 807 | 0.0 | – | |
| ProSiteProfiles | 2 | 57 | 56 | 22.008 | ||
| SMART | 6 | 55 | 50 | 7.0E-15 | ||
| Gene3D | 7 | 56 | 50 | 3.0E-15 | – | |
| Pfam | 10 | 70 | 61 | 8.8E-13 | – | |
| CDD | 10 | 53 | 44 | 8.26826E-13 | ||
| SUPERFAMILY | 33 | 106 | 74 | 8.27E-21 | ||
| CDD | 55 | 106 | 52 | 1.55966E-31 | – | |
| Gene3D | 57 | 109 | 53 | 7.9E-10 | – | |
| ProSiteProfiles | 58 | 107 | 50 | 16.443 | ||
| SMART | 58 | 105 | 48 | 1.7E-12 | ||
| MobiDBLite | 110 | 150 | 41 | - | – | |
| Coils | 167 | 187 | 21 | - | – | |
| MobiDBLite | 377 | 457 | 81 | - | – | |
| Pfam | 406 | 656 | 251 | 3.0E-60 | ||
| MobiDBLite | 409 | 439 | 31 | - | – | |
| MobiDBLite | 497 | 527 | 31 | - | – | |
| MobiDBLite | 512 | 527 | 16 | - | – | |
| Coils | 691 | 718 | 28 | - | – | |
| Coils | 798 | 831 | 34 | - | – | |
| MobiDBLite | 941 | 964 | 24 | - | – | |
| MobiDBLite | 941 | 981 | 41 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of LotjaGi1g1v0784800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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