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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0789100 |
| Transcript ID | LotjaGi1g1v0789100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing family protein; TAIR: AT3G61600.1 POZ/BTB containin G-protein 1; Swiss-Prot: sp|Q9FPW6|POB1_ARATH BTB/POZ domain-containing protein POB1; TrEMBL-Plants: tr|I3SFT8|I3SFT8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0789100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:136141007..136146088) extracted from Lotus japonicus Gifu genome v1.2.
ACCACTAAGCTAACAATGAATCACCAAGCCTACTTATATCTACAACTCATATCTACCCTACTTGTCTCTGGCAAATGTTA ATCAAGATTAGAAAATGGAGATTAGTTAGTTAATTAATTGTTAGGTTAGTTTTAAAGTAGTTAATTAAGACCAAACAAAC TAGTAACAGATACAACAAACATAACAAAATCAAACTCAAATTTGAATTTCCAACCATTTTATTTTCATTTGATTTATTTA TTGGTGACCGCACTTCATAGCTAACTTTTTTTTTTATTTGTAATAAAAAACAAAATAGAAGCATCTTCTTCATTCTTCAC CTTCTCTTCTTCTTCTTCTTCTCTTCTCGCACCGCCAGGGTTTGCGTTTCATTTCTCTGCTTCAATTCGCAGAGGATGAA GGATTTCAATTCGGATCTATTTGAACCGGGCACGGTTATGGACTCCGATTACTCTCGCGGCGGTGCTTCCTCTTCCTCCT CCGATGCTGATTTCGGCTTTGCATTCAATGACAGCAACTTCTCTGACCGGATCCTCAGGATCGAGATTATGGATGACTCG GTCGAGACTCGCTCTGATTCCGACGGATGCACCACCATCGCCGACTGGGCTCGCCAACGCAAGAGGAGAAGGGAGGATAT CAAGAAGGAAAATAATGGTATATATATTTCTTTCCCACCTACCTAGCTTTTCTGTTTGGTGTTTTTCTCTGTGTGGCCAT GGAGGGTTAGGAAATTGGTCATGTGTTTTTGTTCTTGTTTCCTTGTTTATCTTAATTCTAGCTTCTAGGGTTTAAGTTGC TTGCTGCTAGGGGATTTTGTGTATGCATATTTAACATGCATGGCCTTTTATGTTCTCATGGTTTTTTTCTGGAAAACTGG ACAAAGGAAAAGATAAATTGAAATGAAATGAAAAACTATAATCAAATGAACCATACCAGTGTTTCCACAAACTACAACAA GGGAATTTTCCTCCTTTACATGTAATGCAACTAACCAAACTTATATATGAGTTTCTCCGGTGGGGTACCCCCACGCACGC TTGTCAGTATGTTGATTAATTTGAAATGTTCATGTGCTGTGTGCTGCATGCTACCGGAGCTGGATTCTCCGGCTCATTGA TTAGCTGTCAAATATTATCGGTTGTCTTATCATTTAGAAGTGTTGCTGACTTAACATTTAGGTTTAGCTTGCACTGTCTT TTCGCACTTAGACTTACAGCGTGCCATTGGTAATGGTTCCTTTTCTTCTTCATGTGCAAAAGCCCTTCCACTATATGCAA GCACTTTTCTTTCTGTAGAAAGTATAAGGTCTCGCAAGCAAGTAAGGCAGCAAGAAGAAGAGGCATTCGGAAATTCATTA TAAAAATTAATCACCGATAAATGGTTGACAACTTATTTATATTACTGCTACTTTAGAGTGAAACCAGGGCATTAGAGCAG CACCAACCCAGCACGCTTGAGTCTGAAAGTGAATTGAGCAATAGTTGATAATATTGCTTCGTTTTTGGCTGATCTAATCT TTGCTCTCTCTTGCTTGTAGTGGTGGATCTTACTTTATTGCCTGACGAACAAATTTTGAACGAGAATCAGACTGATATAG ATGATTTTGTGCCCTGTGAGAATCAGGATGAAGAGGCAGTTGCAATGGTTGAAGAACCCCCTTCAGGTATTTCAATAAGG GAAAAAATCTTAAACCTGGTTTCTCTTAATATACATTTTTTTATTTATATTGTACCATGGCTATCAAAATTGGACAATTA ATATTAACAGTTGTACGTTTGGTCTGAGACAATGGAAAAGTTATACATATTTGTTCGCTTTCCCCTATCGTGCTCTGCTT ATCCTGTCAAAATAAGCTTGTGAAGATCAACCATTCCGCCATCGTTACTATTTTCCCCTGCAATGAGATTGGGGTGAGAA AACTGTTTATTCTTTTTGACAAAACTGGCCTGCGAACCAGACCTGGAAACCTGTCTGAGGTGAAATCAGATCGGGCCACC TATCTCACATTTCCCACACTCCCAACAAACTGAATGTGATCTCAATTATTCACCGTCTTCGCCATGAGAGGGCTTTATTA TGTTGATTTATCTTCTGATTTGAAATTGAACAAAACCAAACCAACCCAAGCCATGTTGATTAGATCAGTTTGGACCCAGC CTAACAAAACTCTAGAACCTGACCCGACCTGTGTGCAGTACTCCTGTAGAAATTATGTTGCGGTATGGTGGGAGGCTGCT TTTTTTGTTCTTGTCACATCATTTTCTGCATCGTAGTTGTTGCAGGTGCTACAGCATGGGAAGTCATGTCTGTTTACGGA GTTCCTAGCCCCAATTGTAAAATCAGAGGGAAAACCCATTTGTATTCTCAAACCCTAACATTAGCAGGGGGTATTTTGAG TTTTTAATTTGGTCTACTGCTACTATGCTGAGAATCACACTTTGTCAATGATTTTTTTGGTGTGTAACTATGTTGAGAAC CACATTTGACAAGAGAAATTAGTGTGTAAAGGAAGTTATGTATTGGACAAAGGCATGGATAGAACTTAAACATTCTCCTT TTGTTTGCAAGAAGATAGCCTATCCTTTCTGTAAGTGTTAAGTTGTCAATTCTGCCCAATGATTTGAATTGGGTTATTAT TAATACAGGTGATGAGACTGCAGTTGCAAACAGTAATGATTCAAACTTGAACATGGACTGCTCTGCTGTCGCGAGGGTTA GAACATTACATATTAGTTCTCCTATCTTGGCTGCTAAAAGTCCTTTCTTCTACAAGGTACATGTCTCTTCTTTATTGGTT AGATTTGAATAATTTTGCAAAATTATGTATGCTTAGTTGTGCATATTTTGCAGCTTTTCTCAAATGGGATGAGGGAGTCA GAGCAGAGGCATGTCACCCTGAGAATTACTGCATCTGGTATAAACATATATAGAAATATTTTTAGTAGCTTAAATATATT TGTTTCCTCTAATAGTTTCCTTACAAATGTCATACTTCTCTTGCATTTTACAGAGGAAGCTGCTCTCATGGAGCTTCTGA ACTTTATGTATAGTAATAGCTTAAGCATTACTTCACCACCTGGTTTATTGGATGTGTTGATGGCTGCTGACAAATTTGAA GTTGCTTCATGCATGAGATACTGTAGCCGGTTATTGCGGAATATTCCTATGTCACCTGAGTCTGCGCTGCTTTACCTTGA GCTTCCTTCTAGTGTCTTAATGGCTGATGCAGTTCAGCCATTGACTGATGCAGCAAAGCAGTATCTTGCTGGTCGATACA AAGATATAACAAAGTATGTTCTTTCAATTCTGTCTTTTTATTTAACTTGGTTATATGATCTATAGGTTTCTTACCCTATC AACTCTTGGTTTTTTCTTTTCTGTCTTTATATTGATTTGGGCTTATAGTTCATGTTCTGTCTGACTTGAATGCTGTTGAT ACTGAAGTTTGAGCTCAGTTGTATCCTGTATTTTATTTGAGTAGTTTTTTCTTGTGTTTGGTTGCATCTAATTGTTGAAA CTCTTTTAAATAACATTTTGGGTGGACGACTGCTGCCTTTAGTTTATGAAGTTCATATGTTTTAAGCTAGCTCTTTTTTT AATATTCAGTAGCATACCATAAGAAAGAGTTCTTTTTATTTTATTTTGGCTTCTATGCATGATTATATAACTGACAAAGG AAGGCTTGATTATTTTATTTTTAGAAAGCTCCTATTTCTATTCTGACTTTTTTATTAATTTAAAATATAGTTTTACCTTT TCATTCTTTGAATGCTATACTTAATAAGTTTCACAATTGACCAGGTTCCAGGAAGAGGTTATGGGCTTGCCTCTACCTGG AATAGAGGCAATTCTCTCAAGTGATGAACTCCAGGTTGCATCAGAGGATGCTGTCTATGACTTTGTCTTGAAGTGGGCTC GAACCCAGTACCCAAGATTGGAAGATAGGAGAGAAGTCCTGGGTACAAGGCTTGCCCGTTTGATTCGCTTTCCTTACATG ACCTGCCGAAGGCTTAAGAAGGTCTTATCCTGTACTGACTTTGACAATGATGTTTCATCCAAGCTTGTAATTGAAGCCCT CTTTTTTAAGGCTGAGGCTCCACACCGCCAACGCGTACTGGCTGCTGAGGCGTCGTCCTCCAATCGTCTTTTTGTGGAGC GAGCATACAAGTACCGCCCTGTTAAAGTGGTGGAATTTGAACTTCCGCGCCAGCAGTGTGTGGTTTACTTGGATCTGAAG CGAGAGGAGTGTGCCAATTTGTTCCCATCTGGCCGTGTCTATTCTCAGGCATTCCATTTGGGTGGACAGGGGTTTTTCTT ATCAGCACATTGCAACATGGACCAACAAAGCTCATTTCACTGTTTTGGCTTGTTTTTAGGAATGCAGGAAAAAGGCTCTG TTAGCTTTGCTGTTGACTATGAATTTGCCGCGAGGTCTAGACCAACTGAGGAATTCGTCAGCAAGTACAAAGGCAATTAT ACATTCACTGGTGGAAAGGCTGTTGGGTACAGAAACTTGTTTGCAATTCCATGGACTTCATTCCTGGCTGAGGATAGTCT TTACTTCATCAATGGCGTTCTCCATCTTAGGGCTGAGCTCACCATCAGGCAGTGACCCGGATTTGTATTTGTGAACCTTT TCTTTTAGTTGGTAGCTTTGACCTTTTTTGGGATACTGTTTTTCTGGTTACCTGCTGTAATAATCTTAAAAATCTTAACT TATCGCTAGCGCTTCATAAGACCAAATGAATTTTCAGGACTTGTTTATTTAAACCGAATTGTGCTCAATGATATGTAGGG AAATATTTAAAGGAGTTTGAGTAGCTGCAGCAGTTTCTCCTTCGAGTTTTATAGCGTGCATAAATATTGAAGCTACTCAC AGTAACTCCATTTTTACGTGATTTACAGAAAAATAATAAGTAGTAATTTTCAGTAAAAAAATCTAGTAAATTGCCAAACC TGCGCTTAATAATGCAAGTTTAGATTTCTCAAATGCAAGTTCAGTTGCAATTGTTTAATATTACACTGGTTCACATTTCT TCTTAAAAGTTAATTTAGTAATATTACACTGGTTATAACCGA
CDS sequence (LotjaGi1g1v0789100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGATTTCAATTCGGATCTATTTGAACCGGGCACGGTTATGGACTCCGATTACTCTCGCGGCGGTGCTTCCTCTTC CTCCTCCGATGCTGATTTCGGCTTTGCATTCAATGACAGCAACTTCTCTGACCGGATCCTCAGGATCGAGATTATGGATG ACTCGGTCGAGACTCGCTCTGATTCCGACGGATGCACCACCATCGCCGACTGGGCTCGCCAACGCAAGAGGAGAAGGGAG GATATCAAGAAGGAAAATAATGTGGTGGATCTTACTTTATTGCCTGACGAACAAATTTTGAACGAGAATCAGACTGATAT AGATGATTTTGTGCCCTGTGAGAATCAGGATGAAGAGGCAGTTGCAATGGTTGAAGAACCCCCTTCAGGTGATGAGACTG CAGTTGCAAACAGTAATGATTCAAACTTGAACATGGACTGCTCTGCTGTCGCGAGGGTTAGAACATTACATATTAGTTCT CCTATCTTGGCTGCTAAAAGTCCTTTCTTCTACAAGCTTTTCTCAAATGGGATGAGGGAGTCAGAGCAGAGGCATGTCAC CCTGAGAATTACTGCATCTGAGGAAGCTGCTCTCATGGAGCTTCTGAACTTTATGTATAGTAATAGCTTAAGCATTACTT CACCACCTGGTTTATTGGATGTGTTGATGGCTGCTGACAAATTTGAAGTTGCTTCATGCATGAGATACTGTAGCCGGTTA TTGCGGAATATTCCTATGTCACCTGAGTCTGCGCTGCTTTACCTTGAGCTTCCTTCTAGTGTCTTAATGGCTGATGCAGT TCAGCCATTGACTGATGCAGCAAAGCAGTATCTTGCTGGTCGATACAAAGATATAACAAAGTTCCAGGAAGAGGTTATGG GCTTGCCTCTACCTGGAATAGAGGCAATTCTCTCAAGTGATGAACTCCAGGTTGCATCAGAGGATGCTGTCTATGACTTT GTCTTGAAGTGGGCTCGAACCCAGTACCCAAGATTGGAAGATAGGAGAGAAGTCCTGGGTACAAGGCTTGCCCGTTTGAT TCGCTTTCCTTACATGACCTGCCGAAGGCTTAAGAAGGTCTTATCCTGTACTGACTTTGACAATGATGTTTCATCCAAGC TTGTAATTGAAGCCCTCTTTTTTAAGGCTGAGGCTCCACACCGCCAACGCGTACTGGCTGCTGAGGCGTCGTCCTCCAAT CGTCTTTTTGTGGAGCGAGCATACAAGTACCGCCCTGTTAAAGTGGTGGAATTTGAACTTCCGCGCCAGCAGTGTGTGGT TTACTTGGATCTGAAGCGAGAGGAGTGTGCCAATTTGTTCCCATCTGGCCGTGTCTATTCTCAGGCATTCCATTTGGGTG GACAGGGGTTTTTCTTATCAGCACATTGCAACATGGACCAACAAAGCTCATTTCACTGTTTTGGCTTGTTTTTAGGAATG CAGGAAAAAGGCTCTGTTAGCTTTGCTGTTGACTATGAATTTGCCGCGAGGTCTAGACCAACTGAGGAATTCGTCAGCAA GTACAAAGGCAATTATACATTCACTGGTGGAAAGGCTGTTGGGTACAGAAACTTGTTTGCAATTCCATGGACTTCATTCC TGGCTGAGGATAGTCTTTACTTCATCAATGGCGTTCTCCATCTTAGGGCTGAGCTCACCATCAGGCAGTGA
Protein sequence (LotjaGi1g1v0789100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKDFNSDLFEPGTVMDSDYSRGGASSSSSDADFGFAFNDSNFSDRILRIEIMDDSVETRSDSDGCTTIADWARQRKRRRE DIKKENNVVDLTLLPDEQILNENQTDIDDFVPCENQDEEAVAMVEEPPSGDETAVANSNDSNLNMDCSAVARVRTLHISS PILAAKSPFFYKLFSNGMRESEQRHVTLRITASEEAALMELLNFMYSNSLSITSPPGLLDVLMAADKFEVASCMRYCSRL LRNIPMSPESALLYLELPSSVLMADAVQPLTDAAKQYLAGRYKDITKFQEEVMGLPLPGIEAILSSDELQVASEDAVYDF VLKWARTQYPRLEDRREVLGTRLARLIRFPYMTCRRLKKVLSCTDFDNDVSSKLVIEALFFKAEAPHRQRVLAAEASSSN RLFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECANLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGM QEKGSVSFAVDYEFAARSRPTEEFVSKYKGNYTFTGGKAVGYRNLFAIPWTSFLAEDSLYFINGVLHLRAELTIRQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 556 | 551 | 0.0 | – | |
| PANTHER | 6 | 556 | 551 | 0.0 | – | |
| Gene3D | 111 | 280 | 170 | 7.0E-20 | – | |
| ProSiteProfiles | 139 | 214 | 76 | 13.943 | ||
| SUPERFAMILY | 141 | 242 | 102 | 1.1E-13 | ||
| Pfam | 141 | 242 | 102 | 1.9E-14 | ||
| SMART | 145 | 245 | 101 | 2.1E-8 | ||
| CDD | 146 | 228 | 83 | 4.80719E-15 | – | |
| SMART | 260 | 362 | 103 | 1.2E-8 | ||
| Pfam | 268 | 361 | 94 | 1.6E-9 | ||
| CDD | 270 | 361 | 92 | 9.44056E-10 | – | |
| Gene3D | 281 | 382 | 102 | 8.5E-10 | – | |
| Gene3D | 431 | 555 | 125 | 2.2E-5 | ||
| SUPERFAMILY | 443 | 554 | 112 | 1.5E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0789100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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