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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0001700 |
| Transcript ID | LotjaGi2g1v0001700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein; TAIR: AT3G07040.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q39214|RPM1_ARATH Disease resistance protein RPM1; TrEMBL-Plants: tr|A0A0B2NRF6|A0A0B2NRF6_GLYSO Disease resistance protein RPM1; Found in the gene: LotjaGi2g1v0001700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:1090742..1094419) extracted from Lotus japonicus Gifu genome v1.2.
GGTGCTATTGTTAGTGCCATTACACAACAGATTACCGACACATTCAAAGTCTTCTTCCTCTCACCAAAGCTCTATCTTTT GGTCTTCCTCTAACCGTTTAGCAAAAACCAGATCGAGCTAAGATAAAAATGGCGGAACTGGCGGGACTTGTATTGTCTTT CGCTCGTGATATGCTTTCACTAATAGTGGAGTGTGGCACTCTGTTAAAAGATCTCCCAGAAGAAGTCAAAAATATGAGAG ATGAACTGCAAAATATTCAAACCTTCATTTATGAAACAGATAGATCCAATGCAACTGAAGAAGTCAAGGAAAAGTTGAAG CATTTGGTGAAAAGAGCTTTCCACTTAGAAGATATCATCGATAAATACATGATCACTAAGAAATGGGAGCCAGCTCGTAT ACGAACAGCGTATAAGCTCAAGCACTTGAAATGGGTCCAAAAAGATTACGGCTTTCAAATCCCATCTTCTTCAGAACCAG GACAAACCCGTTCCGGTTGAAACCAAGATGCGGCGGTGCAGAACCTTCAATTGGCTCCTCTTTTCCTGAAAGAAGATGAT GTTGTTGGCTTTGAATCACCAAAAAAAACCTTCATTGATTGGTTGGTGAATGGAAGAGAAGAGCGAACTGTTGTCTCCGT GGTTGCGATGGGAGGACAGGGAAAAACCACTCTTGCCAGACAAGTTTTCAACAACCAACAGGTTACAGGCCACTTCCCTT ACCGTGCTTGGGTCACTGTGTCTCAGTCATACACTGTGGAGGGATTGTTGAGCAACATTTTACAGGAATTTTACAAAGAA CAAAAGCAGACTCCTCCTGAAAATATTTCAACAATGGATCGAGGGTCATTGATAACTCAGGTGAGAAACTACTTGCATAA CAAGGAGTATGTTGTCTTTTTTGATGATGTATGGAACACACAGTTTTGGGATGACATTGAGCTTGCTTTAATTGATGATA AAGTTGGAAGTAGAGTATTTATCACAACAAGGGATGTGAATGTTGCAGACTCTTGCAAGAGATCTTCTTTTGTTCAACTG TATGAGCTACAACCATTAACTCAAGAAAAATCCATTGAGTTGTTCTGTAAGAAGGCATTCTTTGAATTGAATGGATGTTG TCCCCATGATCTTATGGACATATCTTCTGAAATTGTTAGCAAATGCAAAGGTTTACCACTAGCTATTGTAGCCATTGGTG GTGTTTTAGCTTGCAGAAAGGCAGATGTGTCTGAGTGGAGAAGCTTTAGTCAAAATCTAAGCTCAGAACTGGAGAGGGAT TCCCGTTTAGATAGCATAAGGAAGGTTTTATGTTTCAGTTATGATGATTTGCCTACCTATCTTAAACCTTGCTATCTATA TTTTGGAATGTACCCTGAAGACTATGAAGTTCGAACAGCGAGATTGACTAGACAGTGGATAGCTGAGGGGTTTGTCAAAG AGGAGAGGGGGAAATCTTTGGAAAAGGTTGCAGAAGGATATCTAATGGAGTTGGTCCGTAGAAGTCTAGTGCAAGCATCT TGGTTGAGTATTGATGGCAGAGTTAAAGGTTCTCGGGTGCATGACCTATTACGGGAGATGATCCATAGAAAATTTGAGGA TTTGAGTTTTGCCCATTTTATTAGTGAAGATGACCGGTCAGCCTCAATTGGGAAAAGTCGACGCCTATCAATATCAGCAA ATTCCAATAGTTTCATGACAAGCACCGAAAGTTCAAACATCCGTTCCTTGCTTTTTTTCATGAAGGAGGAAACGATACAA GAATTACTTGGGAGGATAATTCCTGCAAATTGCAAGCTACTGAAGGTACTTGATTTACAAAATCCAATTTCTATATGGAG TTTTTCTCATGTTCCTCCTGAGAATCATTTTCCTGAGAATTTAGGGACCCTAATCCACTTGAGGTATTTGAACATTGGAG GTAGAGGCATTAAAAGTCTCCCAGAATCCATTTGCAAACTTGAGAACCTTGAGACCTTGGATGTAGGAAAAGGCGAAGTG GTGTTGTTGCCAAAGGAGATAAGCAGACTCATAAAGCTACGACACCTTGATGGGTCTTTTAAGTTTAATCCATTAACGAA GGATAGTGTTGGAGGAATGACATCCCTACAAGCACTAAGTTATTTGAGCCTAGAAGATGATGAAGCAGGAGAGCTAATTA AAGAGCTAGGAAAGCTAAGCCAGTTAAGAGTGTTGGGTTTAAATCGTGTTAGGGAAGGACAAGGAAGCGCTCTGTGTTCC TCATTGAATAAGATGCAGCAACTGGAGAAACTATCGGTTTATGTCACACAGCCAGATGAAGTCATTGATTTGCATTTGAT TTCAACCCTGCCTCTGCTTCGATCGTTGTTCCTTAAAATGAAATTAAATAAGTTGCCAGAGTGGGTTCCAAGCCTTCAAT ATCTTGTTCAGTTGACATTGGAAGACTCCGAGTTAACTGTTGATCCATTCACATCACTACAAAACCTTCCAAACTTGTTG CGCCTCCGGATCGAAAATGCGTATGCAGGTGACACTTTGCATGCTCATGATGGGGGGTTTCCCAAACTAAAGAAGTTACA ACTCAGGAATTTACACAATCTGGAATTCATCCTCATTGACAGAGGAGCAATGCCTTATCTGGAAATTTTCTGGCTACATA ACGTGCCCAAGCTCAATGAGGTGCCAAGCGGCATACAACACTTAAATAATCTTAGTGCGTGTTTGGTTTCAAATCTGGAG ATGTCAAACGTGGATCCAGAAATCCAAAAGCAACTATTTCTTGCTTCTGTAAACGTGGATCGGAGCCAAACGTGTATCCT GAATGGGTTTTCCAAACACATACTTAAACGTGTCGAGTTAAGAGAGCCAGGGCAATTCGACTTTGAAGATAACAAACAAC GCCAAATCATCCAACATGTGCCGCTTGTTCGTGTTTTAGACAAAGACTACAACCATACTCGCTTTGAGTTTGGGGAAAAA AAAGGTATTTTTTTGTCTTCATCATAAAAATATATATATTCTTGTTTGTATTTACTTTTCAGCCATTAAAAATACAAGAT TTATGCATTTCCTAAAATATTTACTCTCTATTTAGTTTTTCTTCTTCTTCTTCTTATTCAGAACATGCTTTGTTTTTTTT TTTTTTCAGAGTAATAAATACCACGTCAGCAATACGAAATAATGAGGTATTTTATTTAGTTGTTGTTTTTCATTTGAGAT TCATAGATATGTATCATCAGTCTAAATAATTTTACTCCAATCGCATAATTTCATATAAGATCAAACAAACACATTTCTTT TAACTTTCAAAAAAAACTTTAATTAAAATAAAATAAATTTATGGTATGACGAAAAAATTATATACTTGTGTAGAAAAAAG TTTACAAGACAGTGCATCAAGCAACATTTGTCTATTCATTTTCATTTTCAGTATTTATGCATTGTAATGCTATATTCTAA TAATATTCTCTTTTTACTTGGTAGGCATTGTGCATCCAGTTCAATGAAATTCAGATTCTCTTTGTGGGCTTTCCACAAAA TGGCCACATTTGGCATTATGTCTTTCTATTTTTCATCTTGTACTTCAATCTTGTATTCTCTTGGATTTTTCTCTAATTAT TTATTAATGCAGCATCTCTTTTCCGTCAAATAAAATTTGTGTATTTTTCTTAATAATGTATGTGAAACTTCAAAGTGA
CDS sequence (LotjaGi2g1v0001700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGGACAGGGAAAAACCACTCTTGCCAGACAAGTTTTCAACAACCAACAGGTTACAGGCCACTTCCCTTACCGTGC TTGGGTCACTGTGTCTCAGTCATACACTGTGGAGGGATTGTTGAGCAACATTTTACAGGAATTTTACAAAGAACAAAAGC AGACTCCTCCTGAAAATATTTCAACAATGGATCGAGGGTCATTGATAACTCAGGTGAGAAACTACTTGCATAACAAGGAG TATGTTGTCTTTTTTGATGATGTATGGAACACACAGTTTTGGGATGACATTGAGCTTGCTTTAATTGATGATAAAGTTGG AAGTAGAGTATTTATCACAACAAGGGATGTGAATGTTGCAGACTCTTGCAAGAGATCTTCTTTTGTTCAACTGTATGAGC TACAACCATTAACTCAAGAAAAATCCATTGAGTTGTTCTGTAAGAAGGCATTCTTTGAATTGAATGGATGTTGTCCCCAT GATCTTATGGACATATCTTCTGAAATTGTTAGCAAATGCAAAGGTTTACCACTAGCTATTGTAGCCATTGGTGGTGTTTT AGCTTGCAGAAAGGCAGATGTGTCTGAGTGGAGAAGCTTTAGTCAAAATCTAAGCTCAGAACTGGAGAGGGATTCCCGTT TAGATAGCATAAGGAAGGTTTTATGTTTCAGTTATGATGATTTGCCTACCTATCTTAAACCTTGCTATCTATATTTTGGA ATGTACCCTGAAGACTATGAAGTTCGAACAGCGAGATTGACTAGACAGTGGATAGCTGAGGGGTTTGTCAAAGAGGAGAG GGGGAAATCTTTGGAAAAGGTTGCAGAAGGATATCTAATGGAGTTGGTCCGTAGAAGTCTAGTGCAAGCATCTTGGTTGA GTATTGATGGCAGAGTTAAAGGTTCTCGGGTGCATGACCTATTACGGGAGATGATCCATAGAAAATTTGAGGATTTGAGT TTTGCCCATTTTATTAGTGAAGATGACCGGTCAGCCTCAATTGGGAAAAGTCGACGCCTATCAATATCAGCAAATTCCAA TAGTTTCATGACAAGCACCGAAAGTTCAAACATCCGTTCCTTGCTTTTTTTCATGAAGGAGGAAACGATACAAGAATTAC TTGGGAGGATAATTCCTGCAAATTGCAAGCTACTGAAGGTACTTGATTTACAAAATCCAATTTCTATATGGAGTTTTTCT CATGTTCCTCCTGAGAATCATTTTCCTGAGAATTTAGGGACCCTAATCCACTTGAGGTATTTGAACATTGGAGGTAGAGG CATTAAAAGTCTCCCAGAATCCATTTGCAAACTTGAGAACCTTGAGACCTTGGATGTAGGAAAAGGCGAAGTGGTGTTGT TGCCAAAGGAGATAAGCAGACTCATAAAGCTACGACACCTTGATGGGTCTTTTAAGTTTAATCCATTAACGAAGGATAGT GTTGGAGGAATGACATCCCTACAAGCACTAAGTTATTTGAGCCTAGAAGATGATGAAGCAGGAGAGCTAATTAAAGAGCT AGGAAAGCTAAGCCAGTTAAGAGTGTTGGGTTTAAATCGTGTTAGGGAAGGACAAGGAAGCGCTCTGTGTTCCTCATTGA ATAAGATGCAGCAACTGGAGAAACTATCGGTTTATGTCACACAGCCAGATGAAGTCATTGATTTGCATTTGATTTCAACC CTGCCTCTGCTTCGATCGTTGTTCCTTAAAATGAAATTAAATAAGTTGCCAGAGTGGGTTCCAAGCCTTCAATATCTTGT TCAGTTGACATTGGAAGACTCCGAGTTAACTGTTGATCCATTCACATCACTACAAAACCTTCCAAACTTGTTGCGCCTCC GGATCGAAAATGCGTATGCAGGTGACACTTTGCATGCTCATGATGGGGGGTTTCCCAAACTAAAGAAGTTACAACTCAGG AATTTACACAATCTGGAATTCATCCTCATTGACAGAGGAGCAATGCCTTATCTGGAAATTTTCTGGCTACATAACGTGCC CAAGCTCAATGAGGTGCCAAGCGGCATACAACACTTAAATAATCTTAGTGCGTGTTTGGTTTCAAATCTGGAGATGTCAA ACGTGGATCCAGAAATCCAAAAGCAACTATTTCTTGCTTCTGTAAACGTGGATCGGAGCCAAACGTGTATCCTGAATGGG TTTTCCAAACACATACTTAAACGTGTCGAGTTAAGAGAGCCAGGGCAATTCGACTTTGAAGATAACAAACAACGCCAAAT CATCCAACATGTGCCGCTTGTTCGTGTTTTAGACAAAGACTACAACCATACTCGCTTTGAGTTTGGGGAAAAAAAAGAGT AA
Protein sequence (LotjaGi2g1v0001700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGGQGKTTLARQVFNNQQVTGHFPYRAWVTVSQSYTVEGLLSNILQEFYKEQKQTPPENISTMDRGSLITQVRNYLHNKE YVVFFDDVWNTQFWDDIELALIDDKVGSRVFITTRDVNVADSCKRSSFVQLYELQPLTQEKSIELFCKKAFFELNGCCPH DLMDISSEIVSKCKGLPLAIVAIGGVLACRKADVSEWRSFSQNLSSELERDSRLDSIRKVLCFSYDDLPTYLKPCYLYFG MYPEDYEVRTARLTRQWIAEGFVKEERGKSLEKVAEGYLMELVRRSLVQASWLSIDGRVKGSRVHDLLREMIHRKFEDLS FAHFISEDDRSASIGKSRRLSISANSNSFMTSTESSNIRSLLFFMKEETIQELLGRIIPANCKLLKVLDLQNPISIWSFS HVPPENHFPENLGTLIHLRYLNIGGRGIKSLPESICKLENLETLDVGKGEVVLLPKEISRLIKLRHLDGSFKFNPLTKDS VGGMTSLQALSYLSLEDDEAGELIKELGKLSQLRVLGLNRVREGQGSALCSSLNKMQQLEKLSVYVTQPDEVIDLHLIST LPLLRSLFLKMKLNKLPEWVPSLQYLVQLTLEDSELTVDPFTSLQNLPNLLRLRIENAYAGDTLHAHDGGFPKLKKLQLR NLHNLEFILIDRGAMPYLEIFWLHNVPKLNEVPSGIQHLNNLSACLVSNLEMSNVDPEIQKQLFLASVNVDRSQTCILNG FSKHILKRVELREPGQFDFEDNKQRQIIQHVPLVRVLDKDYNHTRFEFGEKKE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 130 | 130 | 7.4E-30 | – | |
| SUPERFAMILY | 1 | 239 | 239 | 2.99E-59 | ||
| Pfam | 1 | 227 | 227 | 7.5E-55 | ||
| PANTHER | 1 | 645 | 645 | 5.3E-133 | – | |
| PANTHER | 1 | 645 | 645 | 5.3E-133 | – | |
| PRINTS | 75 | 89 | 15 | 1.7E-7 | – | |
| Gene3D | 137 | 228 | 92 | 3.7E-7 | – | |
| PRINTS | 173 | 187 | 15 | 1.7E-7 | – | |
| SUPERFAMILY | 303 | 710 | 408 | 4.08E-34 | – | |
| Gene3D | 318 | 753 | 436 | 1.6E-39 | ||
| PRINTS | 380 | 396 | 17 | 1.7E-7 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi2g1v0001700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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