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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0019100 |
| Transcript ID | LotjaGi2g1v0019100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | O-methyltransferase; TAIR: AT5G54160.1 O-methyltransferase 1; Swiss-Prot: sp|P93324|CHOMT_MEDSA Isoliquiritigenin 2'-O-methyltransferase; TrEMBL-Plants: tr|I3T9J0|I3T9J0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0019100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:7086655..7088761) extracted from Lotus japonicus Gifu genome v1.2.
TGCCATATTACTCACCCAAATGAGACATCACAGGAGAAGAGACATTATGTAAGCCTATATAAAGAACACTAAAACCAACG AATTACGTGCACAACTCAGCAACAAGAACCAAAACACTTGTCAAATGAGTTCCAATTTCAAACAAAATGAACTTCCCACA GAGGCAGCAAATGTCAATGATGCCTACCCCATTGCTCTGTCACTATGTTTCAGTCGAATCTTTTCTGCAATTTTGAATGC TGCTGTCGATCTCAATTTGTTTGATATCATTGCAAAGGCACAAAATTCTAGTGGTTCAAGCTTGTCTGCTTCTGAAATTG CTTCACAGCTTCCATTTCAACATTCAGAATTGGTTACTAGGCTTGAAAGGATGCTACCAGTGTTGGCTAGTTTTTCTCTG TTAACTTGCTCCATTCGTACCACTGAAGATGGTAGTAGAGAAAGAGTTTATGCTCTCTCACCAGTTGGTGATTACTTTGC AATTGAGAACATTGGAGGCTCTCTTGGTCCCCTCTCAACCTTAGTGCATCGAGGATATTGTGATATTTGGTAACTAAGCA ATTATTACAAAGGATGGAGTCATATATTTTTATCGTAGGCCATAGTTTTTCCTGAACCCAGAGACACTTGCAGTTTGTGG CGAAAACAGTCACAAACTACAGATGTCCATGTGTTTAGTAAAAAGTAGTCCTCCACGAATCAGAGCTCTCTTTAATATGA TCTTACGGTTTCTCGTTTTCAGGAATGATGTGAAGGATGCAATTGTAGATCCTAATAACAATAACCACTTCATAAATGTT TACGGATTAGAGCCTTTTCAATATATGGAGAAAAATAAAGAGTTGAACCACTTATTTAACAAAGGAGCGGCCCTTTCTGG CCTATTAGAAATGAAAGAGATCCTTAAAATATATAAAGGATTTGTGGGAGTATCGACATTGGTTGATGTGGGTGGTGGAG TAGGTCAGGTCTTAGAACAAGTTATCTCTCAATATCCTTCAATGAAAGGAATTAACTTTGATTTGCCTCAAGTGATTCAA CATGCATCACCTCATCCAGGTAACAAATGTCATTCTCTGTTTTTTTTAATGTGCAACCTACTTTATTTTAAAAATTGCAA TTATGAAGTTTCTATAGAGAAAATTGGTGTTTGTTCATTTAGAAAAATATATTAATTAGAAAACACATTTTTGACTTTAA GGGATAGAACATGTATCGGGAGATATGTTTGAAAGTGTTCCAAATGGTGATGCCATTTTACTTAAGGTCAGTGTACCACA TGAGAGATCATCTTTATATTTTGATAGATTCAAATTTGACATAGAAAAATGTCCAAATCAAATTGATGTGTTTTTTCTCT GGTTATTTCAGCGTGTATGTCATAATTGGCCAGATGAAGATTGTGTGAAGGTTTTGAAAATTTGCCATAAAGCTTTGCCT GAGCATGGAAAGGTGATTATTGTGGACACTATATATCCAGAAGTTCCAAACTCCAGCATTACATCTCAATGTGTCAGTGT TGTTGACAATCTCATGTTTTTAGTACATGGCGCAAAGGAAAGAACTGAGAATGAATTCCGAAGCCTGTGCTCTAGCTCTG GATTTTCCAAATTTCATGTTGCGTCTAGTACTGGTTCCTCATCTGTAATAGGAGTGATGGAATTTTATAAATAAAAATTC CGAAGAAGTAAATTGGAATCTTAATCCATTAATAAAATAAAACTAATCTATTTTTACTTTATTTTGATCAGTTGAAATGT TATAGATAGGTGTGTGGTATATAAATGTGCACAAGCAGTAGTAGCTATGATTATATTTATCCTAAATCTCATACAAATTG TGCAGTATCATATAAAGATTTTTTAAAATCATCGTCTATGTATAATTTTGCAACTTTCGCAGAGGTTTTTTTTTTTGGAA AGTCAAAATGAATTAAAGAATAGTAGCACTTAGGGGGGTCCATTTAAACAATGAAAACCCTCTTTCCATCAAAGAGTTTT AGTGTGGTCCATGGAGTCTTTCCTATGATTATGGATTCTTTCTTTCATTTGGGTGAATTGATGACCCGGGTTTATATGAT GTTTTTAGGGTTTTTCTTTGTTAGTTT
CDS sequence (LotjaGi2g1v0019100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTTCCAATTTCAAACAAAATGAACTTCCCACAGAGGCAGCAAATGTCAATGATGCCTACCCCATTGCTCTGTCACT ATGTTTCAGTCGAATCTTTTCTGCAATTTTGAATGCTGCTGTCGATCTCAATTTGTTTGATATCATTGCAAAGGCACAAA ATTCTAGTGGTTCAAGCTTGTCTGCTTCTGAAATTGCTTCACAGCTTCCATTTCAACATTCAGAATTGGTTACTAGGCTT GAAAGGATGCTACCAGTGTTGGCTAGTTTTTCTCTGTTAACTTGCTCCATTCGTACCACTGAAGATGGTAGTAGAGAAAG AGTTTATGCTCTCTCACCAGTTGGTGATTACTTTGCAATTGAGAACATTGGAGGCTCTCTTGGTCCCCTCTCAACCTTAG TGCATCGAGGATATTGTGATATTTGGAATGATGTGAAGGATGCAATTGTAGATCCTAATAACAATAACCACTTCATAAAT GTTTACGGATTAGAGCCTTTTCAATATATGGAGAAAAATAAAGAGTTGAACCACTTATTTAACAAAGGAGCGGCCCTTTC TGGCCTATTAGAAATGAAAGAGATCCTTAAAATATATAAAGGATTTGTGGGAGTATCGACATTGGTTGATGTGGGTGGTG GAGTAGGTCAGGTCTTAGAACAAGTTATCTCTCAATATCCTTCAATGAAAGGAATTAACTTTGATTTGCCTCAAGTGATT CAACATGCATCACCTCATCCAGGGATAGAACATGTATCGGGAGATATGTTTGAAAGTGTTCCAAATGGTGATGCCATTTT ACTTAAGCGTGTATGTCATAATTGGCCAGATGAAGATTGTGTGAAGGTTTTGAAAATTTGCCATAAAGCTTTGCCTGAGC ATGGAAAGGTGATTATTGTGGACACTATATATCCAGAAGTTCCAAACTCCAGCATTACATCTCAATGTGTCAGTGTTGTT GACAATCTCATGTTTTTAGTACATGGCGCAAAGGAAAGAACTGAGAATGAATTCCGAAGCCTGTGCTCTAGCTCTGGATT TTCCAAATTTCATGTTGCGTCTAGTACTGGTTCCTCATCTGTAATAGGAGTGATGGAATTTTATAAATAA
Protein sequence (LotjaGi2g1v0019100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSNFKQNELPTEAANVNDAYPIALSLCFSRIFSAILNAAVDLNLFDIIAKAQNSSGSSLSASEIASQLPFQHSELVTRL ERMLPVLASFSLLTCSIRTTEDGSRERVYALSPVGDYFAIENIGGSLGPLSTLVHRGYCDIWNDVKDAIVDPNNNNHFIN VYGLEPFQYMEKNKELNHLFNKGAALSGLLEMKEILKIYKGFVGVSTLVDVGGGVGQVLEQVISQYPSMKGINFDLPQVI QHASPHPGIEHVSGDMFESVPNGDAILLKRVCHNWPDEDCVKVLKICHKALPEHGKVIIVDTIYPEVPNSSITSQCVSVV DNLMFLVHGAKERTENEFRSLCSSSGFSKFHVASSTGSSSVIGVMEFYK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| PIRSF | 1 | 369 | 369 | 1.3E-105 | ||
| PANTHER | 11 | 369 | 359 | 4.5E-180 | – | |
| PANTHER | 11 | 369 | 359 | 4.5E-180 | – | |
| SUPERFAMILY | 18 | 118 | 101 | 5.06E-21 | ||
| Phobius | 20 | 41 | 22 | - | – | |
| ProSiteProfiles | 25 | 369 | 345 | 66.683 | ||
| Gene3D | 32 | 195 | 164 | 1.7E-101 | ||
| Pfam | 36 | 88 | 53 | 1.8E-13 | ||
| Phobius | 42 | 369 | 328 | - | – | |
| SUPERFAMILY | 135 | 361 | 227 | 3.22E-48 | ||
| Pfam | 142 | 348 | 207 | 4.3E-60 | ||
| Gene3D | 177 | 356 | 180 | 1.7E-101 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | O-methyltransferase activity | Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule. | ||
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi2g1v0019100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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