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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0019800 |
| Transcript ID | LotjaGi2g1v0019800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT1G66910.1 Protein kinase superfamily protein; Swiss-Prot: sp|P93604|LRK10_WHEAT Rust resistance kinase Lr10; TrEMBL-Plants: tr|A0A072VEV2|A0A072VEV2_MEDTR Receptor-like kinase; Found in the gene: LotjaGi2g1v0019800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:7205473..7208149) extracted from Lotus japonicus Gifu genome v1.2.
AAGTTTTCATGCTTAATTTCTTCTGCAGTGACCCACCATATAGAGACGTGCATTACTATATTACTATCACATTTCATTGA CTCAGCTTGTTTGAATTACGCGCATTCATTCATTAATTGCTTTGTTTGAATTTTCACATTGACACCACACAATATCTTAT TTTCCTTAATTTTTTCTTTTGAACGACTGAATGGTAAGGTAAGGAGCCTGTCAAACTGATATACTACTAAGCTATCAAAT TGACTTTAAGTCTTTCTCCCCAAAATTAAATTCATTAATTGGTTTCTTTGAATTTTCATATCTTCTTTACCTTAGTTATT TCTTTCAACTGCATGCATCCATTTTTCTCTCAAACTAGCTAGCTAGCTTGCATCATCGATCCATGACAATATTGCAAATA ATTATGCTGCTGCTGATCTTCATGACTAGTACAGTTAGTGTTGGAAATGCTCAAAATGACCTCTGTCCCTTCCATCTATC TTATGCACATAACAACATGAATCAGAGGATTATTGAATTTCCAGCACTTCCAGCTCCGGTAATTAAGGCTCCTCGTCGAC CGCATAGACTGTGGAACACGAGATATAGTGCTAAAAGATCCCGACAACTGTCTTCCTAGACTCTTACTAAGTCACAACTT CTCATTATTTTATCCTTTACAAATAGCCTACTGGCAGGAAAGCTACAATATTACTTTCTTCGATTGTCCTTCAGTTCGAT TGTCTTGCCCAATTTATATCGCCGAATCTAGCGAAAGTATACTTGATTTGGACCTTTTTCAGTGCACCAAAATGTTTGAT CAAGTATTGCGAGTATATGCGTTAAATATTCGACAAAATTTACTCCGGTTGAAATGGCTGAAGAAGAATTTTGGCAGCGC GTGCTTAAAGTGTGAAATCAAATCAAAGAAGATACCTTGGTCCAAAATTTTTATCGCTGCAGGTCAATCAGATAAAATCT TCTGTGTCTCGTCCTATTTATTTGACCAATAGAATTTTATCATGTTATTTAGAACTGTTACCAACTTTCACTTGATCCAT TTCATTCACGTCCATTTAATTTGATCCATTTTGTCCTCATTTGAACAAGTTTCTCATTCATGCTGATGTTTCTGAAATTT GCAGGTGTAGTTGTTGGTTCATCTGTGCTGGTGTTTTTACTAGGTGTCATCATTCGAACATATCACTATTTTAGGACAAA AAGCGGTGATCAGACAAGGGTCGATAATTTTTTAAAGGATTACAGGGCTATGGAGCCAACCAGATTCTCTTATGCTGATA TCAAGAGAATCGCACACCAATTTAAGGAAAAGCTTGGTGAAGGAGCTCATGGAGCTGTCTACAAAGGAAAACTATCCACC CAAATTCTGGTTGCTGTGAAGATCCTCAACAACACAGAGGCAGATGATGGGACAAATTTCATCAATGAAGTGGGAACCAT GGGCAAAATCCACCATGTCAATGTTGTTCGCTTGCTTGGCTTCTGTGCTGATGGGTTTCACAAAGCTCTAGTTTATGACT TTTTCCCAAATGGATCACTGCAGAATTTCATCTCTGCACCAAACAAGGATAATAACACCTTCCTTGGATGGGAAAAGTCA CAAGAAATTGCTCTAGGCATAGCCACAGGAATTGATTATCTTCACCGAGGCTGTGAGCAAAGAATTCTTCATTTTGACAT CAATCCTCATAATGTCCTACTTGATGAAACTTTCACTCCAAAAATCTCAGACTTTGGTTTAGCAAAGTTGTGTTCCAAAA ATCGAAGTACTGTGTCAATGACGGCAGCCAGGGGAACCCTAGGCTACATGGCACCGGAAATTTTTTCTAGAAACTTTGGC AATGTGTCTTACAAGTCTGATATCTACAGCTATGGGATGTTGTTGCTAGAGATGGTTGGAGGAAGAAAGAATATTGTGAA CACAAGTCAAGAAAATAATAATGTACAAGTTCTGTATCCAGATTGGATACACGGATTGCTTGAAGGAAGGGACATGCATG TCCCTATTGATGAAGAGGGTGATTTTGAAATTGCAAAGAAACTGGCCATTGTGGGACTTTGGTGCATCCAATGGAATCCT TTGCATCGTCCCTCCATGAAGTCTGTATTACAGATGCTCCAAGGAGAGGGAGGTAAGTTAAAAGTTCCCACCAATCCTTT CCAGCCAAAAGCCTCTACTAGTACAAGCACTAATACTACTGTTGCTGAAAAACGTCTGAATTTAGAGTTGGAAGTGATTC AAGAACTGGATTGACTACAGATTTTTATTATTTAGCTATTCATTATTGTCACTGGCTTATTAGTTTTTAGCAATATGCTA GTTTGTCAATTTATTGCATATTTCATAGTATTTAAACTTCGAATGTAACTTGAAAATTTCAGTATTAGTGTGGGGTTTTC CCATACAGTTTTTGGGATAATTGGCTACTTGATATGATATCAGGGTCTCTATGAGTGAATGGTTTAGAGTTTGATCCTTG CTTCCGTCACTTTCTAGTTAATAGTAGAATTTAAGCACATTGGTAGGTCAGTCTGTGCATTATCCAATTTAGCACAGGTA TTGTTTCCAAAATTACTTTTCAAAACCAAAAACCAGAAACTTGCAACCACCCCGAACAGGGATTGAATTGATTTGATTTG ATTATCTTCCTTCCTTTTCTCTCTCACAACATCATAC
CDS sequence (LotjaGi2g1v0019800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGATCAAGTATTGCGAGTATATGCGTTAAATATTCGACAAAATTTACTCCGGTTGAAATGGCTGAAGAAGAATTT TGGCAGCGCGTGCTTAAAGTGTGAAATCAAATCAAAGAAGATACCTTGGTCCAAAATTTTTATCGCTGCAGGTGTAGTTG TTGGTTCATCTGTGCTGGTGTTTTTACTAGGTGTCATCATTCGAACATATCACTATTTTAGGACAAAAAGCGGTGATCAG ACAAGGGTCGATAATTTTTTAAAGGATTACAGGGCTATGGAGCCAACCAGATTCTCTTATGCTGATATCAAGAGAATCGC ACACCAATTTAAGGAAAAGCTTGGTGAAGGAGCTCATGGAGCTGTCTACAAAGGAAAACTATCCACCCAAATTCTGGTTG CTGTGAAGATCCTCAACAACACAGAGGCAGATGATGGGACAAATTTCATCAATGAAGTGGGAACCATGGGCAAAATCCAC CATGTCAATGTTGTTCGCTTGCTTGGCTTCTGTGCTGATGGGTTTCACAAAGCTCTAGTTTATGACTTTTTCCCAAATGG ATCACTGCAGAATTTCATCTCTGCACCAAACAAGGATAATAACACCTTCCTTGGATGGGAAAAGTCACAAGAAATTGCTC TAGGCATAGCCACAGGAATTGATTATCTTCACCGAGGCTGTGAGCAAAGAATTCTTCATTTTGACATCAATCCTCATAAT GTCCTACTTGATGAAACTTTCACTCCAAAAATCTCAGACTTTGGTTTAGCAAAGTTGTGTTCCAAAAATCGAAGTACTGT GTCAATGACGGCAGCCAGGGGAACCCTAGGCTACATGGCACCGGAAATTTTTTCTAGAAACTTTGGCAATGTGTCTTACA AGTCTGATATCTACAGCTATGGGATGTTGTTGCTAGAGATGGTTGGAGGAAGAAAGAATATTGTGAACACAAGTCAAGAA AATAATAATGTACAAGTTCTGTATCCAGATTGGATACACGGATTGCTTGAAGGAAGGGACATGCATGTCCCTATTGATGA AGAGGGTGATTTTGAAATTGCAAAGAAACTGGCCATTGTGGGACTTTGGTGCATCCAATGGAATCCTTTGCATCGTCCCT CCATGAAGTCTGTATTACAGATGCTCCAAGGAGAGGGAGGTAAGTTAAAAGTTCCCACCAATCCTTTCCAGCCAAAAGCC TCTACTAGTACAAGCACTAATACTACTGTTGCTGAAAAACGTCTGAATTTAGAGTTGGAAGTGATTCAAGAACTGGATTG A
Protein sequence (LotjaGi2g1v0019800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFDQVLRVYALNIRQNLLRLKWLKKNFGSACLKCEIKSKKIPWSKIFIAAGVVVGSSVLVFLLGVIIRTYHYFRTKSGDQ TRVDNFLKDYRAMEPTRFSYADIKRIAHQFKEKLGEGAHGAVYKGKLSTQILVAVKILNNTEADDGTNFINEVGTMGKIH HVNVVRLLGFCADGFHKALVYDFFPNGSLQNFISAPNKDNNTFLGWEKSQEIALGIATGIDYLHRGCEQRILHFDINPHN VLLDETFTPKISDFGLAKLCSKNRSTVSMTAARGTLGYMAPEIFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNIVNTSQE NNNVQVLYPDWIHGLLEGRDMHVPIDEEGDFEIAKKLAIVGLWCIQWNPLHRPSMKSVLQMLQGEGGKLKVPTNPFQPKA STSTSTNTTVAEKRLNLELEVIQELD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 45 | 45 | - | – | |
| PANTHER | 2 | 424 | 423 | 1.5E-231 | – | |
| PANTHER | 2 | 424 | 423 | 1.5E-231 | – | |
| TMHMM | 46 | 68 | 23 | - | – | |
| Phobius | 46 | 67 | 22 | - | – | |
| Phobius | 68 | 426 | 359 | - | – | |
| Gene3D | 82 | 183 | 102 | 3.5E-24 | – | |
| SUPERFAMILY | 87 | 382 | 296 | 1.09E-71 | ||
| ProSiteProfiles | 108 | 397 | 290 | 36.909 | ||
| Pfam | 110 | 380 | 271 | 6.2E-47 | ||
| ProSitePatterns | 114 | 136 | 23 | - | ||
| Gene3D | 184 | 393 | 210 | 5.8E-52 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0019800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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