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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0023100 |
| Transcript ID | LotjaGi2g1v0023100.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sugar transporter, putative; TAIR: AT3G19940.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9LT15|STP10_ARATH Sugar transport protein 10; TrEMBL-Plants: tr|A0A0R0EAF3|A0A0R0EAF3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0023100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:8103192..8105789) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCAGGAGGGGCTTTTGTACCAACTGGAGGAGGAGGGGGAAGACAGTATGAAGGGAAGGTTACAGCTTTCGTGTTGGT CACATGTTTCGTGGCGGCCATGGGAGGTCTTCTCTTTGGTTATGATCTCGGTATCACCGGGGGCGTGACTTCCATGGAAC CATTTTTGATCAAGTTCTTCTCAAGTGTGCATAGACAAATGAAAGATGGATCACACCATGAGAACCAATATTGCAAATTT GACAATGAGCTACTCACGTTGTTCACCTCTTCCTTGTACCTTGCTGCATTGGTTGCCTCTTTCTTTGCTTCCACCACCAC CAGAATGCTTGGACGCAAACCCTCGATGTTTCTAGGGGGTTTGTTTTTCCTTGTTGGTGCCTTGCTCAATGGTTTTGCTC AAAATATTAAAATGCTTATCGCTGGACGTTTATTGCTTGGTTTTGGTGTGGGCTATTCCAATCAGGTAAATAATTTAAAC GTACACACCCAAATTTTCTCTACATTTTATATTTCTCACCATATCTGAACTGAACAATTTAGATCAGACAACTCATGTTT CATTAAGATTGGTGAACAAGCTTGTCTTAAAACTTAAGTCGTCTCATCAAATTCTCAGGTCAGATTCAGTGACTGCATGA ATGGATTTTTAGTAAAATGTTACAACTTGATTAGTGAAACATGAAATGGAATGAGACACGAAATGAGGGTACAGGATTTT AATCCCCTGTATGATGTCTCCTTCGCTATACCACCAATCAAATTGGGCAATATAGATATGAGTATGACAATTATAAATTT ACATGAGTGATTTTTAAATGAGATGGTACAATTTGTTTGGTGCCACAAGAAAGAGTATTTCAAATGGGAATAGAGGCTTT CAAATTTTTTTCTCTCTTTTCTTCTCCTCTTTTCACACTGAGAGTGTCTCTGATGAGGTGAGGTTTTTGCATTCTGCGGA TATCTATAGCATATACCATTTCTAAAGTTTAAATTTTTAAACTAGAAAACAATGTCTTCAGACTAATTAATTTTGTTTTA ATTGTTGTGCAACAGTCTGTTCCTGTGTACTTGTCTGAAATGGCTCCAGCACAGATCAGAGGAGCACTCAACATGGGGTT CCAAATGATGATCACAATTGGTATCCTAATTGCAAACCTTATCAACTATAAAACTTCAAAGCTTGAACATGGATGGAGAA TTTCTCTAGGGGTTGGAGCTGTGCCTGCAATTTTGTTGTGTTTGGGATCTCTTTTCTTGGGTGACACGCCTAACTCCTTG ATTGAAAGAGGGCAGCATGAGAATGCCAAGAAAATGTTGCAAAAGATCCGTGGCACCGTGAATGTTGATGAGGAGTACCA AGATCTTGTTGATGCCAGTGAAGAAGCTAAGAAGGTGGAGCACCCATGGCGAAACATCATGCAGCCAAAATACAGACCAC AACTCACTTTTTGCAGTTTCATTCCATTCTTCCAACAACTCACAGGCATCAATGTCATCATGTTCTATGCACCTGTCCTC TTCAAGACTTTGGGCTTTGGCAGTGACGCTTCCCTCATGTCTGCAGTTATCACCGGAGGTGTCAATGTAGTTGCCACATT AGTTTCCATCTTCACTGTTGACAAGTTTGGAAGAAGGATCTTGTTCCTTGAAGGTGGTGCCCAAATGCTTGTTTGCCAGG TGAAAACACAATTCAATTTTTGAAATGACCAGTTACATATATCATTTTAACATGAAATCTCAGTGTCTAATTCTAAGTTC CACTAATAAATTTTACATGCCAATTAAAAATTACAAAGTTTGCAACTATTTAATTGAGGTGACAAACTTCTATTAGTCAG ACAGGAAATTGGACACTTATTGAGTGCAGGAGATCTTGACCCTGAGCCTGAATCAATAGGACTGAAATCATCTGTCCTCA TTTGTTATCTCATTTCATGTCCTAGTCCTACCAATTAAATTATGTCATGTGACACACAATCCAGCCAATTGCTTTTTGTA AATTTTCATAACTTCACTGATACAATTTCACACTAAATAGGGACAGAAGACTAATAAATATATTTTTTCCCTTATTGTTT TGTGAGCATGACTGGTATAAATGTTGAAACTTGAAACTATTACTTGTAGATTGCTGTGGGAGCAATGATTGCTGCAAAGA TTGGACTAAGTGGTGATGGCTCATTCACCAAAGGAGAAGCCAACTTCGTCTTGTTTTTGATATGTGCATATGTTGCTGCA TTTGCTTGGTCCTGGGGCCCATTAGGATGGTTGGTGCCTACTGAAATATGCTCTCTTGAAGCTAGATCTGCAGGGCAAGC TATCAATGTTGCCGTGAACATGTTGTTTACATTTGCAATTGCTCAAGTTTTTCTCTCCATGCTTTGCCATTTGAAGTTTG GCCTCTTCTTCTTCTTTGGTGGCTTTGTCATTGTCATGACTATCTTTATTGCATTGCTCTTGCCTGAGACCAAGAATGTT CCAATTGAAGAAATGAACAGAGTGTGGAAGTCACACTGGTTCTGGGGCAAGTTCATTCCTGATGTCTGATGCGGCTGTCA TTGGTGGATATGAACTCAAGACTTGTCCTTGAAGTTGA
CDS sequence (LotjaGi2g1v0023100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGGAGGGGCTTTTGTACCAACTGGAGGAGGAGGGGGAAGACAGTATGAAGGGAAGGTTACAGCTTTCGTGTTGGT CACATGTTTCGTGGCGGCCATGGGAGGTCTTCTCTTTGGTTATGATCTCGGTATCACCGGGGGCGTGACTTCCATGGAAC CATTTTTGATCAAGTTCTTCTCAAGTGTGCATAGACAAATGAAAGATGGATCACACCATGAGAACCAATATTGCAAATTT GACAATGAGCTACTCACGTTGTTCACCTCTTCCTTGTACCTTGCTGCATTGGTTGCCTCTTTCTTTGCTTCCACCACCAC CAGAATGCTTGGACGCAAACCCTCGATGTTTCTAGGGGGTTTGTTTTTCCTTGTTGGTGCCTTGCTCAATGGTTTTGCTC AAAATATTAAAATGCTTATCGCTGGACGTTTATTGCTTGGTTTTGGTGTGGGCTATTCCAATCAGTCTGTTCCTGTGTAC TTGTCTGAAATGGCTCCAGCACAGATCAGAGGAGCACTCAACATGGGGTTCCAAATGATGATCACAATTGGTATCCTAAT TGCAAACCTTATCAACTATAAAACTTCAAAGCTTGAACATGGATGGAGAATTTCTCTAGGGGTTGGAGCTGTGCCTGCAA TTTTGTTGTGTTTGGGATCTCTTTTCTTGGGTGACACGCCTAACTCCTTGATTGAAAGAGGGCAGCATGAGAATGCCAAG AAAATGTTGCAAAAGATCCGTGGCACCGTGAATGTTGATGAGGAGTACCAAGATCTTGTTGATGCCAGTGAAGAAGCTAA GAAGGTGGAGCACCCATGGCGAAACATCATGCAGCCAAAATACAGACCACAACTCACTTTTTGCAGTTTCATTCCATTCT TCCAACAACTCACAGGCATCAATGTCATCATGTTCTATGCACCTGTCCTCTTCAAGACTTTGGGCTTTGGCAGTGACGCT TCCCTCATGTCTGCAGTTATCACCGGAGGTGTCAATGTAGTTGCCACATTAATTGCTGTGGGAGCAATGATTGCTGCAAA GATTGGACTAAGTGGTGATGGCTCATTCACCAAAGGAGAAGCCAACTTCGTCTTGTTTTTGATATGTGCATATGTTGCTG CATTTGCTTGGTCCTGGGGCCCATTAGGATGGTTGGTGCCTACTGAAATATGCTCTCTTGAAGCTAGATCTGCAGGGCAA GCTATCAATGTTGCCGTGAACATGTTGTTTACATTTGCAATTGCTCAAGTTTTTCTCTCCATGCTTTGCCATTTGAAGTT TGGCCTCTTCTTCTTCTTTGGTGGCTTTGTCATTGTCATGACTATCTTTATTGCATTGCTCTTGCCTGAGACCAAGAATG TTCCAATTGAAGAAATGAACAGAGTGTGGAAGTCACACTGGTTCTGGGGCAAGTTCATTCCTGATGTCTGA
Protein sequence (LotjaGi2g1v0023100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGGAFVPTGGGGGRQYEGKVTAFVLVTCFVAAMGGLLFGYDLGITGGVTSMEPFLIKFFSSVHRQMKDGSHHENQYCKF DNELLTLFTSSLYLAALVASFFASTTTRMLGRKPSMFLGGLFFLVGALLNGFAQNIKMLIAGRLLLGFGVGYSNQSVPVY LSEMAPAQIRGALNMGFQMMITIGILIANLINYKTSKLEHGWRISLGVGAVPAILLCLGSLFLGDTPNSLIERGQHENAK KMLQKIRGTVNVDEEYQDLVDASEEAKKVEHPWRNIMQPKYRPQLTFCSFIPFFQQLTGINVIMFYAPVLFKTLGFGSDA SLMSAVITGGVNVVATLIAVGAMIAAKIGLSGDGSFTKGEANFVLFLICAYVAAFAWSWGPLGWLVPTEICSLEARSAGQ AINVAVNMLFTFAIAQVFLSMLCHLKFGLFFFFGGFVIVMTIFIALLLPETKNVPIEEMNRVWKSHWFWGKFIPDV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | - | – | |
| PANTHER | 5 | 340 | 336 | 3.8E-231 | – | |
| PANTHER | 5 | 340 | 336 | 3.8E-231 | – | |
| Gene3D | 17 | 466 | 450 | 6.7E-111 | – | |
| TIGRFAM | 19 | 348 | 330 | 2.1E-78 | ||
| TMHMM | 21 | 43 | 23 | - | – | |
| Phobius | 21 | 41 | 21 | - | – | |
| SUPERFAMILY | 23 | 460 | 438 | 4.71E-51 | ||
| ProSiteProfiles | 28 | 452 | 425 | 36.644 | ||
| Pfam | 29 | 340 | 312 | 5.4E-86 | ||
| CDD | 31 | 450 | 420 | 5.88506E-176 | – | |
| PRINTS | 36 | 46 | 11 | 2.9E-21 | ||
| Phobius | 42 | 83 | 42 | - | – | |
| Phobius | 84 | 103 | 20 | - | – | |
| TMHMM | 85 | 104 | 20 | - | – | |
| Phobius | 104 | 114 | 11 | - | – | |
| Phobius | 115 | 133 | 19 | - | – | |
| TMHMM | 117 | 136 | 20 | - | – | |
| Phobius | 134 | 138 | 5 | - | – | |
| Phobius | 139 | 161 | 23 | - | – | |
| TMHMM | 140 | 162 | 23 | - | – | |
| PRINTS | 140 | 159 | 20 | 2.9E-21 | ||
| ProSitePatterns | 145 | 170 | 26 | - | ||
| Phobius | 162 | 172 | 11 | - | – | |
| TMHMM | 169 | 191 | 23 | - | – | |
| Phobius | 173 | 192 | 20 | - | – | |
| Phobius | 193 | 203 | 11 | - | – | |
| TMHMM | 201 | 223 | 23 | - | – | |
| Phobius | 204 | 223 | 20 | - | – | |
| Phobius | 224 | 284 | 61 | - | – | |
| TMHMM | 285 | 307 | 23 | - | – | |
| Phobius | 285 | 307 | 23 | - | – | |
| Phobius | 308 | 326 | 19 | - | – | |
| TMHMM | 322 | 344 | 23 | - | – | |
| Phobius | 327 | 350 | 24 | - | – | |
| PANTHER | 341 | 472 | 132 | 3.8E-231 | – | |
| PANTHER | 341 | 472 | 132 | 3.8E-231 | – | |
| Pfam | 346 | 463 | 118 | 7.9E-25 | ||
| Phobius | 351 | 361 | 11 | - | – | |
| Phobius | 362 | 380 | 19 | - | – | |
| TMHMM | 364 | 386 | 23 | - | – | |
| PRINTS | 365 | 386 | 22 | 2.9E-21 | ||
| Phobius | 381 | 399 | 19 | - | – | |
| PRINTS | 388 | 400 | 13 | 2.9E-21 | ||
| Phobius | 400 | 422 | 23 | - | – | |
| TMHMM | 401 | 420 | 20 | - | – | |
| Phobius | 423 | 428 | 6 | - | – | |
| TMHMM | 427 | 449 | 23 | - | – | |
| Phobius | 429 | 448 | 20 | - | – | |
| Phobius | 449 | 476 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0023100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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