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LotjaGi2g1v0060800.2

Overview

Field Value
Gene ID LotjaGi2g1v0060800
Transcript ID LotjaGi2g1v0060800.2
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Xylosyltransferase 1; TAIR: AT1G71070.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; Swiss-Prot: sp|Q9FLD7|GT14A_ARATH Beta-glucuronosyltransferase GlcAT14A; TrEMBL-Plants: tr|I1L2U1|I1L2U1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0060800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:12937976..12946936) extracted from Lotus japonicus Gifu genome v1.2.

TTGAAATCAATGAATAGATTGAGATTCTTTCCTCCTGTAACCAAAGAGAGAGAAAAGAAAGCATCATGACATGACTCCAT AGTTGACCGACCCCAACAACAAATCTAAACACAGAAAGAACCCTAGCCCTCACGGCATTTTTACACAGAATTAGTGAGAC TGAGTAAGAGCAATTCTGGAAGAATTTTTTGGAACTTTCTGATCTGGGTATCCATCTTACAATCACCATTTCCTTTTTCA TGTCCCTTTTTTTACTCTAAGTAGCATTGATGACTCCGCTGCACTTTCCTCACTTCAGTACCAAATCAACAAAAAGGCAA GATCTTCAATGACCCATTAACCCAAACTATCTCAAAATCCAGAATTTAGCTACACCCACTTCTCAAAATCCTTCCATTTT GTGTTTATCAATACACCCATATGCTCCACTAACAGCTACTACTATTTTCATCATCAATGGGTGCTGAGAAGAAATGGCTC TTCACCCTATTCACTGCAGCATTTCTCTCCCTCATCATTCTCATGCTCACTTCCTTCTCTTGCTTCACCTCCCCCAAGCC TTTCCCTTCTCTTGTCCAGCAAGGAGCTCACTATCCCCCTGCATTTGCCTACTTCATAGCTGGTGGGAACAGAGACAAGA ACAGGATATTTAGGTTGTTGCTGGCTATCTATCATCCGAGGAACCGTTACCTGCTTCACCTTGGAATGGATGCTAGGGAT GAAGAGAGGCATGAGCTGGCTGCTGCAGTTATGTCGGTGCCGGCAATTCGGGCTTTTGGAAATGTTGATGTGGTGGGGAA GGCTGATTATGTGACCTACTTGGGGTCCTCCAATGTTGCCATCACTCTGAGGGCTGCTGCTATCATGATGAAATTGGATG GTGGATGGAATTGGTTTGTCACATTAAGCGCGCGAGATTATCCCCTCATCACCCAGGATGGTAATGCCAATACGGTAATT TCTGTTTTGGATCAAGGATAATGGATTTCCACTATCACTATGTGATGGTTGTTGGTTTTCACTTGTTTAGGATTACACAT TTAGGGTTAAGTGTATGAAATGTTGTCATGACTAGATTGAGATAAATTGTGCATACTATGTTTATTTGATGCTGCTACAT TTTAGAATGTTCACCACAATATTTAACAAGGCAATAATTCTTTGGTAGCGTTTAGTAACTAAACAGAACAGAACAGAACT AACAAGGCAATAACGTCTTGCATTCTGTGTTTGGTAGCTACAAAATAGTATATAACTATATATAGGATCATATATATTGT TTTGCGTCTGGTACTTATGGAACGTAACAAATACACTGGATTTGTATTATTCAAGTGTGGTAATGGAAAAACATGAGATG GGTGAACCTTCAAAGATGATTCTCCCCAAGCCTAAGCTTCATATATAGGCTCGCTGCCATGACACATTGACAGAATTCCA TCATACCCCAAACAGACTTCCCTCTTATATTCCTCCCTACATAATTTCTCTTTCATAACTGACCAGCGCGCTTGCTTATC CCCCATGTTCTCCTCTCTTTCTTCTTTTGGCCAAAGCTAACTTCTCTTACATACTTTTCAAAACTTACCTTAAGTGCACT AATAACAGGGGTTGTTGACACTAGGGTTGTCAATAGTGTGCTATAGCGCCATAGAGGCCTTTAGGGGGCACATGGCCGCT CCTGGTTTCTGCATAGAATTGCAGTTTAGTGTAGAGGCTATTGCTGACTAAAGTGTTGGAAATAATGGTCGTTGGGGCGT TATTTGGCTGAGATTCGGTGTGACTGACAAAAACCTAAAACAGATCTTAGAAAGTTAATGTTTGGGCATTTTTGGAGGTA TTTTAAGTGTTTTGCAAGTGGATGAGGAGGAAGAGATCTACCACTGTGATAGTAGTGAAAGTGATAAAGAAGAAGTCTTG GATTTAGAAGAGGAATTGATAGAATATTCCTGTAAATATTGTTGTAATTAGTTTGTGTATCTCCTCTATAAGTCATATCC CTTATATTATGCAACATATTCATAGCATAGTTAATATCAAGGTTGTCAGACTCGTGAGTCTAAGCAGACTCGTTTTAGGT AGGTAGACTCGACTCGTAGACTCGACTCGTAGACTCGACGAGACTCGAGTCTACCAGAAATGAAAATTTACTAAGTATAA CCCTGTCATATGAAAAATAAATACAAACATATAATCTAATTATAAGAGGATTAAGAGCATCCAAGATGCATTTAATCAAA TAAACTCAAAATCCAACTTCATAATAAAGCAATTAAGCAAAGTTTAACAAAGTACCACACCATAAGCTAAGTAGTTAAGT ACCAAAATAAAGTACATACTCAAAGTACCACAACAAAAGCATTAAAACAAAGTACATAAAAGTCAGATGAAAAGTCATTC TTCCATTCCATGATCATCACCATCATCATCTTCAGATTCTCCTCCATCATCATTGCCATCGGCATCACCTTCATCAGAAT CAGATGAAAAGTCTTGTCTAATTCCACTTGCATTAGTATGAGTACTAATACTTCCTTCAACTTCATCCAAATCAACATTA ACATCATTATCATTAAGATGTTCAAGTCCAACTTCTTCATTCAGTTCATTGACATTAACATCTTCTCCTTCCTCAGTTAT CCACTCATCATCTGAAGCAACTTCCTCAAATGAACAAGAGGCAAAAACATTTCTCTTTTTTGGTTTATTCTTCAACTTCA AGTTGTACATGACATAAACCAAATCATTCATCTTCTTTTGGTGCAATTTATTCCTTTTCTTTGTATGCACCTAGAAATAA AACATAAGTTTACAATTTCAATATTATCTAAAAATATCATAACTTCCTAAATTCTAAGCCATATATATTAATATGTAGAA ACAAAGTGAGATAGAAGTCAAACATACCATTTCAAATGCGCTCCAATTACGCTCACACCCGGAAGAACTACAAGTCAAGC TTAGAACCCGAATGGCAAAATTCCTTAGTTCGGGACAATGATCTCCATAAGCCTCCCACCATTCTGCTGGAGTCACAGTC TTCCTAACACTTTGTGCATCTTCTAGTCCAAACATGCCTTTTCTATTATGAAACACAATAAGTTGGGCATGAATCTTTTT CCTCTCCACGGCATTGGGTACCATCTTTATCATGCAACTGTATAGCCCTTCTTTGACCTCAACATCTTCCTTTTTGAAAT TAGAATCCCAATGGAAGTAGGGATTAAGATAATATCTAGCTGCATGTAAGGGCCTATGAAGTTGTTTATCCCACCTCTCA TCAATGATTTTCCATACAGACTCATATCTACAATATAAAGAGAACACTTAGTTTTAAGAAAGAGTGAAAATAATCTATGA ATAAGGAAAACGTATTTACCTTTTCTTGACATCTTGAAGTTTGTTCTTATCTTCTCTTTAGCGGTATCAATTGCATCATA TATGAAACCCATGGCGGGTTTTTCATCTGAATCCACCAAGCGAATGACTTCTATCATAGGACCAGCAGCCTTGAGACATA TCACTATGTTCTTCCAAAATTGAGAATCCTTTACTATTCTTTGCACCTTTTTCCCCTCTGTTGAAGCAGCAAACTTAGTT GACCTCCAATCTTCTGAATCAAACATGGCCCTCAGTGGTGTTTCGAGTTCACTAAGACAAGATAGAGTCAAATATGCTGT GGCAAAGCGAGTCGCACCAGGCCTAATCAAGTCCCTCCCAGAAGTCTCTTTCCTCAACAAAGTAATAAGCATAGTCCTGG AATATATGTAGGTGGTGATATTTCTTCCCTTCTTTATAGTGACTTTATGCACATTCAAAATCTTCTCAAAATCTTCTAAT ATCAAGTCAATGCAATGTGCCGCACACGGGGTCCAATACAAATGATCTATTGTTTGCATCAATTTTTCTCCCGCTGCTTT GTAATTTGCAGCATTATCAGTAACCACCTGAACAACATTTTCTGCTCCAACATAATTGATAGCATCTTCCAACATTTTTG AAACCTTATCAGTGGTTTTTGAAATGTCAGAAGTGTCCAATGAATACAGAAAAAATGTACCTTTAGGACTGTTTACCATG AAGTTGCAAATTGAGCGCCTCTTCCTATCAGTCCATCCATCAGACATGATTGTGCAACCGGTTTTTTTCCATTCCTCCTT AAACTCATCTCTTATTCCATCAGTTCGAGCCACAGCTCGTTTCAAAAGCTTTTCTCTAATATCATTATAAGAAGGTGGTT TGAAACCACATCCATATCTCCCAACAGTCTCCAACATCTTTGCAAAAGCAGGATTTTTCACCACATTGAAAGAAAGACCA CTTGTGTAGAAAAATTCAGCAATTTCATCATAAGCTTGCTCCTTCAAGTCTTTTTTCAGCATTTCATTCAAATGTTGTTG CACCCCTCCTCCACTACTCTTTCCCTTTGATGTGAAGCTAAGAAGACCTTTCCCTTTGCTTTGAATTTGATGCCTAGCAA CATCAACCTCCACTTCATTTTCTGCACTAATGTCAATCAAATGCCTCTTTTTATTTTTTGCATCTTCAGCATTAGACACA ATTTGCTTAAACAATTGCATCACATCATCTGGGACACTAACACATCGCCCAGCATCTCCTCCATAACAAGCAAGGTGTAA CTTGAATCTATTAATTCCTCCCCAGAATTCGCTATGACAATAGTTGCAGCGAACTTTTTTGCCATTTCCAAGAACATCTA TCCCATGTTTCCACCCAGGATCATTTCTTCTACCGGGATAGTTCGATCTTCCGCTTACATTAGAAGAAGCAGTAGCAGCA TTACTAGTGTTTTGTGAATTTCCAGCCCCTGACATTGCTCACTCACTGTCCCAAAAAACAAAAATAGCAGGTAAGGACAT GGAAAGAACATGAAAGAACTCACAGAACCTGACATTCATCTCACTCACAGAAATGAAAGAACATGGAAATGAAAAAAAAA AAAACAAAAATAGAAGGTACACGAAGGAGATGAAGCAATCAGGGGATGAAGAAGGGAACATAAGCAATTAAGCACAGCAA ATTAGGAAGGAAACAAAAACAAAGAAGAAGGGGATGAAAGCAAATCATGAAGGAAGAAGGAAATGAAAAAAAAAATAAAA CAAACGCAGAGGAGAAGGTTACCCACGAACCCACGAACGAAGGAGATGAGACACGCAGCGGCGGCGCGGGCGGCGGCGCG AGACAGAGGCGCGGGCGGCGGCGCGAGGTTGAGAGGTATCCTTGAGTGAGGAAGAACGAAAGCAGAGGAGAGGACTGAGG AGAACGCAGGGAAGATAGAACGCAGAAGGTATAAAATTAGGTTTAGAATTTGGGGATTTTTTAACTTAAAAAAAAAAAAA AACCTTGACTCGGTGACTCGGTCCTGACTCGCGAGTCAACCGAGTCAGACCGAGTCTGACCGAGTTTTGACCAAAAACGA GTCTGACAGCGAGTCGACTCGTTTTTCCTATGTAGACTCGCGAGTCTGCCGAGTCAGCGAGTTAACTCGCGAGTCTGACA ACATTGGTTAATATCATTCATAGCCTAGTTAGTAGCATAGTCAATAATAGCATTCATAGCCTATTACCTATGCTATTTAC TAGGCTATGAATGTTTTTAGCTATGCTATTGTCTTGGCTATGAATGTTATTTACTATGCTGACTTAATAAAGGATATACA CAAGCTAATTACAAGAATATTTACAGGAATATTCTATCAGGAATATTTATGATTCCTACTTATCGAACTCTTATTTGAGT TTTCATGTTTTTTGGGAGTTTATTTGAAGTCGTAGAGGCTTAAACTTCCTTGTTACCTTGATTTTTGTAGGTATTTACGT ATAAGTTTTGTTCATTGACTTTTTACTGTTAATTATGAATGAGTTTTTACTTTTGAGTGCTTTTTTATCATTTGAGCATT TATATATGTATGTAGTATAAATTATATAAACTGTAAACAAAAACAGCATGGCGTCCATCCCGCAATGCGCCCTTCTGCTT TAGCATTTTTGGGGTTGGTAATACACGCTACTTTCTGGGATTGACAATACTAGTTGGTAGTTGATCCCTTTATTGGTTGC TAACATACTCCTACCATATTGGAAATATGAGAAATACCCAATGTCAAATAAGCTTGGCACCTTCAATGCATAAATGGGAC TGCCTCCACCTCGGGCAAGTTGATTTGATGACTCTTCGTTCCAACTCATTATGGAAATGTTAAATGGCAGGAACTCCCCG AGTGGGCTCAATCAAGTAAATTATTGTTTAGTGGAAAAGGAAAACTTGGTTACCTTACTGCAGTTTCCTTCGGTGATATA CTTTCCAAATATTGGGGTTTTGGGCAAGGGTCTAATAGTTTATCCACCTCTTCTTCCTTTGGGACATTATCTGGGCCTGG ATACCCTGAAAAAACAGCCCTGTCCTCACTGCTAAAATTAGGGAGTTGATTCTTTAGAGAAAGCTTTTCTTCCCATGTTT CAACTTTCATTTCCCAAGCCTCTCTATTTGATAGACTAGCTCTTAGAGGTAGACCTCCCATAACGAAGGGGTATGTGAGG CGCCAATGAAGCCTCAGTTGTAACTGAACAACTAATAAACTGTGTATTTTTTGTCAGCAACTAATAAAATGTTAGTATAA ATAAGAGTGATTAAGCCTCTGTTAGTTACTTTTGGAATTAGTGGATTTGGGATAACTAAATCGTTGCAAATTCATTTGTA ACTGCTTCTGAGACTTGTATCTATCCTATTCTCTCAATAATACATTCTGATCAGAATCCATTTGATTCTGGTCATCTTCT TCAATTCGTGTCTTCTTCTTCCCTATTGTTCTACCAGTTCTTGCACTATTGCGTCAAGATCTTTCAGCTGCTGCCCCTGT GCCAGTTTAGCTTCAACACCCAGTATTTGCCCACCCTTTTCTTCAAAGGGAAATATGGAGGACATGATATACTTTTTTAT AAAGGTGTCAGCTTTATTTGTGTGCAACCTCTCCCACACACAACAACTTTAAAGGAGCCATAGTAACACGGGGAAAACTT AGATAAATGTGTTGTGAAACTGAATCTTGTCTATGTATTGGACTTTTAAACAAACCCAGTCCCCCATTTGAAAGACCTTT AGCGGCCTCTTTTTATCTGCGTATTTTGTGCATCTGATCTAGCTTGATCTTCAGCGAGATAGAATTTGAGTTGTTTCAAT GCCTCATCTCCAGATTCTAACTACTGCTCCAATTCCTGTGGAATCATGAATATAACACAATACCTACCAGTCACCCACTC ACTCTTCATAAAAACTATGTGTACTATTACTGCCTCTATTACAAATTCTATCCCCTGACTGTCTTTGTCTTAGGTTTCAT GGAATTTCTTTTCAGGTGCACTCTACTGTCAAATTTTATCAGATGAATTAAATGCTGATGTTATATTTTATATTATTTCA TCTTATTGGTGATAAAATGCTGTTTTCCAGTTCTAAACTTTATCCACTGAATTATGCTATACATCCTTCGAGGGAAACTG ATTACTTACTAATATTCTCTCATTTCTCTATATGATCATTGTCTTTTTGTCCGCAGGCTTATCCAACTTACTAACCCATA CTCTTTTTATCTTTATAGATCTGTCCCATGTTTTTTCTTCTGTTCGGAGGGACCTCAATTTCATTGATCACACCAGTGAC CTTGGATGGAAGGAGTAATGAAACTACTGCTAATTTTAGCTTCTATGTTGTGGCACTCTTACAGTTAGTTCAAGATCATT TATTCTTGTTTTTATAAATCCATGCAGAAGTGATAGATTCCAGCCTATTGTAGTTGATCCAGCAATATATTTAGCTAGGA GAAGTCAGATTTTCCAAGCTACACAGAAGCGGGAGACACCTGATGCATTCAAAATCTTCACAGGCAAATCCATTCTCTCA AAGAATCCTTTGGCTTTGAGTTTGACAGTTTTATGTTGAATGATTTCCTTTCCTTGCAGGTTCTCCATGGGTCATCTTGA GTCGATCCTTCCTCGAGTTCTGCATTTTCGGCTCGGACAATCTACCTCGATCGCTCCTGATGTATTTTACAAATGTTAAG TTATCCCAAGAAGGTTATTTTCACTCAGTCATTTGCAACGCACCAGAATTCAAGAACACAACGGTCAACGGTGACTTGCG GTATATGATCTGGGACAATCCTCCGAAGATGGAACCACACTCCCTAAATGTATCTGTTTACAATCAGATGGTAGAAAGTG GGGCTGCTTTTGCTAGACAGTTTGATGTTGATGACCCTGTACTGGACATGATTGATGCGAAGATCCTCCGGCGCGGGCGT AATCGAGCTGTGCCGGGAGCGTGGTGCTCTGGCCGGAGGAGCTGGTGGGTAGATCCATGTTCCCAGTGGAATGACGTCAA TATTCTGAAGCCAGGTCCTCAGGCTAAGAAGCTTGAGGAGTCTGTTTCAAGTCTTCTTGATGACTGGAGCTCACAGATCA ATCAATGTCAGAATTCAAGTGAAGAGACACAAGAGTAGAAACATTTAAGGAAGCTCTTAAGTGTGTTGCACTCTGATCCA TGGACCAGTAAAAGTTGCATTTTACTGAGAGAACATTCTCAGGTCGCCAATGTTCATATCACCATCGTTGGAGTGGTGAA GAAGGGAATATGCTTAAGTTTTTGGCTGGGGGATTAATATTTCTGATGGATTCTCCTAAAGCTTCAATCCACTTGATTGG TTAAGAGTATATCCTCCTGCTTCCAATTTTTGTTCATGTATGTTCTGTATGTTTCCTCATCCACATTGGGATTTCGACTC TTAGAACAGAAAGTCCATTCTTTATATGATTGTCATTTTCAATGTTCTTCTCACTCTTTGCCTCTTGCATAGTTATCAAA TCGTAATCCAAATCATGAATCTTGAAGTTAATTATTGAATCATATGGTTTATTGAGCTAATGAGCTTATTTTATACTGGT A 

CDS sequence (LotjaGi2g1v0060800.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGTGCTGAGAAGAAATGGCTCTTCACCCTATTCACTGCAGCATTTCTCTCCCTCATCATTCTCATGCTCACTTCCTT CTCTTGCTTCACCTCCCCCAAGCCTTTCCCTTCTCTTGTCCAGCAAGGAGCTCACTATCCCCCTGCATTTGCCTACTTCA TAGCTGGTGGGAACAGAGACAAGAACAGGATATTTAGGTTGTTGCTGGCTATCTATCATCCGAGGAACCGTTACCTGCTT CACCTTGGAATGGATGCTAGGGATGAAGAGAGGCATGAGCTGGCTGCTGCAGTTATGTCGGTGCCGGCAATTCGGGCTTT TGGAAATGTTGATGTGGTGGGGAAGGCTGATTATGTGACCTACTTGGGGTCCTCCAATGTTGCCATCACTCTGAGGGCTG CTGCTATCATGATGAAATTGGATGGTGGATGGAATTGGTTTGTCACATTAAGCGCGCGAGATTATCCCCTCATCACCCAG GATGATCTGTCCCATGTTTTTTCTTCTGTTCGGAGGGACCTCAATTTCATTGATCACACCAGTGACCTTGGATGGAAGGA AAGTGATAGATTCCAGCCTATTGTAGTTGATCCAGCAATATATTTAGCTAGGAGAAGTCAGATTTTCCAAGCTACACAGA AGCGGGAGACACCTGATGCATTCAAAATCTTCACAGGTTCTCCATGGGTCATCTTGAGTCGATCCTTCCTCGAGTTCTGC ATTTTCGGCTCGGACAATCTACCTCGATCGCTCCTGATGTATTTTACAAATGTTAAGTTATCCCAAGAAGGTTATTTTCA CTCAGTCATTTGCAACGCACCAGAATTCAAGAACACAACGGTCAACGGTGACTTGCGGTATATGATCTGGGACAATCCTC CGAAGATGGAACCACACTCCCTAAATGTATCTGTTTACAATCAGATGGTAGAAAGTGGGGCTGCTTTTGCTAGACAGTTT GATGTTGATGACCCTGTACTGGACATGATTGATGCGAAGATCCTCCGGCGCGGGCGTAATCGAGCTGTGCCGGGAGCGTG GTGCTCTGGCCGGAGGAGCTGGTGGGTAGATCCATGTTCCCAGTGGAATGACGTCAATATTCTGAAGCCAGGTCCTCAGG CTAAGAAGCTTGAGGAGTCTGTTTCAAGTCTTCTTGATGACTGGAGCTCACAGATCAATCAATGTCAGAATTCAAGTGAA GAGACACAAGAGTAG 

Protein sequence (LotjaGi2g1v0060800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGAEKKWLFTLFTAAFLSLIILMLTSFSCFTSPKPFPSLVQQGAHYPPAFAYFIAGGNRDKNRIFRLLLAIYHPRNRYLL HLGMDARDEERHELAAAVMSVPAIRAFGNVDVVGKADYVTYLGSSNVAITLRAAAIMMKLDGGWNWFVTLSARDYPLITQ DDLSHVFSSVRRDLNFIDHTSDLGWKESDRFQPIVVDPAIYLARRSQIFQATQKRETPDAFKIFTGSPWVILSRSFLEFC IFGSDNLPRSLLMYFTNVKLSQEGYFHSVICNAPEFKNTTVNGDLRYMIWDNPPKMEPHSLNVSVYNQMVESGAAFARQF DVDDPVLDMIDAKILRRGRNRAVPGAWCSGRRSWWVDPCSQWNDVNILKPGPQAKKLEESVSSLLDDWSSQINQCQNSSE ETQE 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 6 6 -
ProSiteProfiles 1 29 29 6.0
Phobius 1 31 31 -
PANTHER 3 396 394 5.0E-235
PANTHER 3 396 394 5.0E-235
Phobius 7 22 16 -
TMHMM 7 29 23 -
Phobius 23 31 9 -
Phobius 32 404 373 -
Pfam 50 309 260 5.7E-59

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Cellular component Membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0060800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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