Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0060800 |
| Transcript ID | LotjaGi2g1v0060800.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Xylosyltransferase 1; TAIR: AT1G71070.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; Swiss-Prot: sp|Q9FLD7|GT14A_ARATH Beta-glucuronosyltransferase GlcAT14A; TrEMBL-Plants: tr|I1L2U1|I1L2U1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0060800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:12938419..12946480) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGTGCTGAGAAGAAATGGCTCTTCACCCTATTCACTGCAGCATTTCTCTCCCTCATCATTCTCATGCTCACTTCCTT CTCTTGCTTCACCTCCCCCAAGCCTTTCCCTTCTCTTGTCCAGCAAGGAGCTCACTATCCCCCTGCATTTGCCTACTTCA TAGCTGGTGGGAACAGAGACAAGAACAGGATATTTAGGTTGTTGCTGGCTATCTATCATCCGAGGAACCGTTACCTGCTT CACCTTGGAATGGATGCTAGGGATGAAGAGAGGCATGAGCTGGCTGCTGCAGTTATGTCGGTGCCGGCAATTCGGGCTTT TGGAAATGTTGATGTGGTGGGGAAGGCTGATTATGTGACCTACTTGGGGTCCTCCAATGTTGCCATCACTCTGAGGGCTG CTGCTATCATGATGAAATTGGATGGTGGATGGAATTGGTTTGTCACATTAAGCGCGCGAGATTATCCCCTCATCACCCAG GATGGTAATGCCAATACGGTAATTTCTGTTTTGGATCAAGGATAATGGATTTCCACTATCACTATGTGATGGTTGTTGGT TTTCACTTGTTTAGGATTACACATTTAGGGTTAAGTGTATGAAATGTTGTCATGACTAGATTGAGATAAATTGTGCATAC TATGTTTATTTGATGCTGCTACATTTTAGAATGTTCACCACAATATTTAACAAGGCAATAATTCTTTGGTAGCGTTTAGT AACTAAACAGAACAGAACAGAACTAACAAGGCAATAACGTCTTGCATTCTGTGTTTGGTAGCTACAAAATAGTATATAAC TATATATAGGATCATATATATTGTTTTGCGTCTGGTACTTATGGAACGTAACAAATACACTGGATTTGTATTATTCAAGT GTGGTAATGGAAAAACATGAGATGGGTGAACCTTCAAAGATGATTCTCCCCAAGCCTAAGCTTCATATATAGGCTCGCTG CCATGACACATTGACAGAATTCCATCATACCCCAAACAGACTTCCCTCTTATATTCCTCCCTACATAATTTCTCTTTCAT AACTGACCAGCGCGCTTGCTTATCCCCCATGTTCTCCTCTCTTTCTTCTTTTGGCCAAAGCTAACTTCTCTTACATACTT TTCAAAACTTACCTTAAGTGCACTAATAACAGGGGTTGTTGACACTAGGGTTGTCAATAGTGTGCTATAGCGCCATAGAG GCCTTTAGGGGGCACATGGCCGCTCCTGGTTTCTGCATAGAATTGCAGTTTAGTGTAGAGGCTATTGCTGACTAAAGTGT TGGAAATAATGGTCGTTGGGGCGTTATTTGGCTGAGATTCGGTGTGACTGACAAAAACCTAAAACAGATCTTAGAAAGTT AATGTTTGGGCATTTTTGGAGGTATTTTAAGTGTTTTGCAAGTGGATGAGGAGGAAGAGATCTACCACTGTGATAGTAGT GAAAGTGATAAAGAAGAAGTCTTGGATTTAGAAGAGGAATTGATAGAATATTCCTGTAAATATTGTTGTAATTAGTTTGT GTATCTCCTCTATAAGTCATATCCCTTATATTATGCAACATATTCATAGCATAGTTAATATCAAGGTTGTCAGACTCGTG AGTCTAAGCAGACTCGTTTTAGGTAGGTAGACTCGACTCGTAGACTCGACTCGTAGACTCGACGAGACTCGAGTCTACCA GAAATGAAAATTTACTAAGTATAACCCTGTCATATGAAAAATAAATACAAACATATAATCTAATTATAAGAGGATTAAGA GCATCCAAGATGCATTTAATCAAATAAACTCAAAATCCAACTTCATAATAAAGCAATTAAGCAAAGTTTAACAAAGTACC ACACCATAAGCTAAGTAGTTAAGTACCAAAATAAAGTACATACTCAAAGTACCACAACAAAAGCATTAAAACAAAGTACA TAAAAGTCAGATGAAAAGTCATTCTTCCATTCCATGATCATCACCATCATCATCTTCAGATTCTCCTCCATCATCATTGC CATCGGCATCACCTTCATCAGAATCAGATGAAAAGTCTTGTCTAATTCCACTTGCATTAGTATGAGTACTAATACTTCCT TCAACTTCATCCAAATCAACATTAACATCATTATCATTAAGATGTTCAAGTCCAACTTCTTCATTCAGTTCATTGACATT AACATCTTCTCCTTCCTCAGTTATCCACTCATCATCTGAAGCAACTTCCTCAAATGAACAAGAGGCAAAAACATTTCTCT TTTTTGGTTTATTCTTCAACTTCAAGTTGTACATGACATAAACCAAATCATTCATCTTCTTTTGGTGCAATTTATTCCTT TTCTTTGTATGCACCTAGAAATAAAACATAAGTTTACAATTTCAATATTATCTAAAAATATCATAACTTCCTAAATTCTA AGCCATATATATTAATATGTAGAAACAAAGTGAGATAGAAGTCAAACATACCATTTCAAATGCGCTCCAATTACGCTCAC ACCCGGAAGAACTACAAGTCAAGCTTAGAACCCGAATGGCAAAATTCCTTAGTTCGGGACAATGATCTCCATAAGCCTCC CACCATTCTGCTGGAGTCACAGTCTTCCTAACACTTTGTGCATCTTCTAGTCCAAACATGCCTTTTCTATTATGAAACAC AATAAGTTGGGCATGAATCTTTTTCCTCTCCACGGCATTGGGTACCATCTTTATCATGCAACTGTATAGCCCTTCTTTGA CCTCAACATCTTCCTTTTTGAAATTAGAATCCCAATGGAAGTAGGGATTAAGATAATATCTAGCTGCATGTAAGGGCCTA TGAAGTTGTTTATCCCACCTCTCATCAATGATTTTCCATACAGACTCATATCTACAATATAAAGAGAACACTTAGTTTTA AGAAAGAGTGAAAATAATCTATGAATAAGGAAAACGTATTTACCTTTTCTTGACATCTTGAAGTTTGTTCTTATCTTCTC TTTAGCGGTATCAATTGCATCATATATGAAACCCATGGCGGGTTTTTCATCTGAATCCACCAAGCGAATGACTTCTATCA TAGGACCAGCAGCCTTGAGACATATCACTATGTTCTTCCAAAATTGAGAATCCTTTACTATTCTTTGCACCTTTTTCCCC TCTGTTGAAGCAGCAAACTTAGTTGACCTCCAATCTTCTGAATCAAACATGGCCCTCAGTGGTGTTTCGAGTTCACTAAG ACAAGATAGAGTCAAATATGCTGTGGCAAAGCGAGTCGCACCAGGCCTAATCAAGTCCCTCCCAGAAGTCTCTTTCCTCA ACAAAGTAATAAGCATAGTCCTGGAATATATGTAGGTGGTGATATTTCTTCCCTTCTTTATAGTGACTTTATGCACATTC AAAATCTTCTCAAAATCTTCTAATATCAAGTCAATGCAATGTGCCGCACACGGGGTCCAATACAAATGATCTATTGTTTG CATCAATTTTTCTCCCGCTGCTTTGTAATTTGCAGCATTATCAGTAACCACCTGAACAACATTTTCTGCTCCAACATAAT TGATAGCATCTTCCAACATTTTTGAAACCTTATCAGTGGTTTTTGAAATGTCAGAAGTGTCCAATGAATACAGAAAAAAT GTACCTTTAGGACTGTTTACCATGAAGTTGCAAATTGAGCGCCTCTTCCTATCAGTCCATCCATCAGACATGATTGTGCA ACCGGTTTTTTTCCATTCCTCCTTAAACTCATCTCTTATTCCATCAGTTCGAGCCACAGCTCGTTTCAAAAGCTTTTCTC TAATATCATTATAAGAAGGTGGTTTGAAACCACATCCATATCTCCCAACAGTCTCCAACATCTTTGCAAAAGCAGGATTT TTCACCACATTGAAAGAAAGACCACTTGTGTAGAAAAATTCAGCAATTTCATCATAAGCTTGCTCCTTCAAGTCTTTTTT CAGCATTTCATTCAAATGTTGTTGCACCCCTCCTCCACTACTCTTTCCCTTTGATGTGAAGCTAAGAAGACCTTTCCCTT TGCTTTGAATTTGATGCCTAGCAACATCAACCTCCACTTCATTTTCTGCACTAATGTCAATCAAATGCCTCTTTTTATTT TTTGCATCTTCAGCATTAGACACAATTTGCTTAAACAATTGCATCACATCATCTGGGACACTAACACATCGCCCAGCATC TCCTCCATAACAAGCAAGGTGTAACTTGAATCTATTAATTCCTCCCCAGAATTCGCTATGACAATAGTTGCAGCGAACTT TTTTGCCATTTCCAAGAACATCTATCCCATGTTTCCACCCAGGATCATTTCTTCTACCGGGATAGTTCGATCTTCCGCTT ACATTAGAAGAAGCAGTAGCAGCATTACTAGTGTTTTGTGAATTTCCAGCCCCTGACATTGCTCACTCACTGTCCCAAAA AACAAAAATAGCAGGTAAGGACATGGAAAGAACATGAAAGAACTCACAGAACCTGACATTCATCTCACTCACAGAAATGA AAGAACATGGAAATGAAAAAAAAAAAAACAAAAATAGAAGGTACACGAAGGAGATGAAGCAATCAGGGGATGAAGAAGGG AACATAAGCAATTAAGCACAGCAAATTAGGAAGGAAACAAAAACAAAGAAGAAGGGGATGAAAGCAAATCATGAAGGAAG AAGGAAATGAAAAAAAAAATAAAACAAACGCAGAGGAGAAGGTTACCCACGAACCCACGAACGAAGGAGATGAGACACGC AGCGGCGGCGCGGGCGGCGGCGCGAGACAGAGGCGCGGGCGGCGGCGCGAGGTTGAGAGGTATCCTTGAGTGAGGAAGAA CGAAAGCAGAGGAGAGGACTGAGGAGAACGCAGGGAAGATAGAACGCAGAAGGTATAAAATTAGGTTTAGAATTTGGGGA TTTTTTAACTTAAAAAAAAAAAAAAACCTTGACTCGGTGACTCGGTCCTGACTCGCGAGTCAACCGAGTCAGACCGAGTC TGACCGAGTTTTGACCAAAAACGAGTCTGACAGCGAGTCGACTCGTTTTTCCTATGTAGACTCGCGAGTCTGCCGAGTCA GCGAGTTAACTCGCGAGTCTGACAACATTGGTTAATATCATTCATAGCCTAGTTAGTAGCATAGTCAATAATAGCATTCA TAGCCTATTACCTATGCTATTTACTAGGCTATGAATGTTTTTAGCTATGCTATTGTCTTGGCTATGAATGTTATTTACTA TGCTGACTTAATAAAGGATATACACAAGCTAATTACAAGAATATTTACAGGAATATTCTATCAGGAATATTTATGATTCC TACTTATCGAACTCTTATTTGAGTTTTCATGTTTTTTGGGAGTTTATTTGAAGTCGTAGAGGCTTAAACTTCCTTGTTAC CTTGATTTTTGTAGGTATTTACGTATAAGTTTTGTTCATTGACTTTTTACTGTTAATTATGAATGAGTTTTTACTTTTGA GTGCTTTTTTATCATTTGAGCATTTATATATGTATGTAGTATAAATTATATAAACTGTAAACAAAAACAGCATGGCGTCC ATCCCGCAATGCGCCCTTCTGCTTTAGCATTTTTGGGGTTGGTAATACACGCTACTTTCTGGGATTGACAATACTAGTTG GTAGTTGATCCCTTTATTGGTTGCTAACATACTCCTACCATATTGGAAATATGAGAAATACCCAATGTCAAATAAGCTTG GCACCTTCAATGCATAAATGGGACTGCCTCCACCTCGGGCAAGTTGATTTGATGACTCTTCGTTCCAACTCATTATGGAA ATGTTAAATGGCAGGAACTCCCCGAGTGGGCTCAATCAAGTAAATTATTGTTTAGTGGAAAAGGAAAACTTGGTTACCTT ACTGCAGTTTCCTTCGGTGATATACTTTCCAAATATTGGGGTTTTGGGCAAGGGTCTAATAGTTTATCCACCTCTTCTTC CTTTGGGACATTATCTGGGCCTGGATACCCTGAAAAAACAGCCCTGTCCTCACTGCTAAAATTAGGGAGTTGATTCTTTA GAGAAAGCTTTTCTTCCCATGTTTCAACTTTCATTTCCCAAGCCTCTCTATTTGATAGACTAGCTCTTAGAGGTAGACCT CCCATAACGAAGGGGTATGTGAGGCGCCAATGAAGCCTCAGTTGTAACTGAACAACTAATAAACTGTGTATTTTTTGTCA GCAACTAATAAAATGTTAGTATAAATAAGAGTGATTAAGCCTCTGTTAGTTACTTTTGGAATTAGTGGATTTGGGATAAC TAAATCGTTGCAAATTCATTTGTAACTGCTTCTGAGACTTGTATCTATCCTATTCTCTCAATAATACATTCTGATCAGAA TCCATTTGATTCTGGTCATCTTCTTCAATTCGTGTCTTCTTCTTCCCTATTGTTCTACCAGTTCTTGCACTATTGCGTCA AGATCTTTCAGCTGCTGCCCCTGTGCCAGTTTAGCTTCAACACCCAGTATTTGCCCACCCTTTTCTTCAAAGGGAAATAT GGAGGACATGATATACTTTTTTATAAAGGTGTCAGCTTTATTTGTGTGCAACCTCTCCCACACACAACAACTTTAAAGGA GCCATAGTAACACGGGGAAAACTTAGATAAATGTGTTGTGAAACTGAATCTTGTCTATGTATTGGACTTTTAAACAAACC CAGTCCCCCATTTGAAAGACCTTTAGCGGCCTCTTTTTATCTGCGTATTTTGTGCATCTGATCTAGCTTGATCTTCAGCG AGATAGAATTTGAGTTGTTTCAATGCCTCATCTCCAGATTCTAACTACTGCTCCAATTCCTGTGGAATCATGAATATAAC ACAATACCTACCAGTCACCCACTCACTCTTCATAAAAACTATGTGTACTATTACTGCCTCTATTACAAATTCTATCCCCT GACTGTCTTTGTCTTAGGTTTCATGGAATTTCTTTTCAGGTGCACTCTACTGTCAAATTTTATCAGATGAATTAAATGCT GATGTTATATTTTATATTATTTCATCTTATTGGTGATAAAATGCTGTTTTCCAGTTCTAAACTTTATCCACTGAATTATG CTATACATCCTTCGAGGGAAACTGATTACTTACTAATATTCTCTCATTTCTCTATATGATCATTGTCTTTTTGTCCGCAG GCTTATCCAACTTACTAACCCATACTCTTTTTATCTTTATAGATCTGTCCCATGTTTTTTCTTCTGTTCGGAGGGACCTC AATTTCATTGATCACACCAGTGACCTTGGATGGAAGGAGTAATGAAACTACTGCTAATTTTAGCTTCTATGTTGTGGCAC TCTTACAGTTAGTTCAAGATCATTTATTCTTGTTTTTATAAATCCATGCAGAAGTGATAGATTCCAGCCTATTGTAGTTG ATCCAGCAATATATTTAGCTAGGAGAAGTCAGATTTTCCAAGCTACACAGAAGCGGGAGACACCTGATGCATTCAAAATC TTCACAGGCAAATCCATTCTCTCAAAGAATCCTTTGGCTTTGAGTTTGACAGTTTTATGTTGAATGATTTCCTTTCCTTG CAGGTTCTCCATGGGTCATCTTGAGTCGATCCTTCCTCGAGTTCTGCATTTTCGGCTCGGACAATCTACCTCGATCGCTC CTGATGTATTTTACAAATGTTAAGTTATCCCAAGAAGGTTATTTTCACTCAGTCATTTGCAACGCACCAGAATTCAAGAA CACAACGGTCAACGGTGACTTGCGGTATATGATCTGGGACAATCCTCCGAAGATGGAACCACACTCCCTAAATGTATCTG TTTACAATCAGATGGTAGAAAGTGGGGCTGCTTTTGCTAGACAGTTTGATGTTGATGACCCTGTACTGGACATGATTGAT GCGAAGATCCTCCGGCGCGGGCGTAATCGAGCTGTGCCGGGAGCGTGGTGCTCTGGCCGGAGGAGCTGGTGGGTAGATCC ATGTTCCCAGTGGAATGACGTCAATATTCTGAAGCCAGGTCCTCAGGCTAAGAAGCTTGAGGAGTCTGTTTCAAGTCTTC TTGATGACTGGAGCTCACAGATCAATCAATGTCAGAATTCAAGTGAAGAGACACAAGAGTAG
CDS sequence (LotjaGi2g1v0060800.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGCTGAGAAGAAATGGCTCTTCACCCTATTCACTGCAGCATTTCTCTCCCTCATCATTCTCATGCTCACTTCCTT CTCTTGCTTCACCTCCCCCAAGCCTTTCCCTTCTCTTGTCCAGCAAGGAGCTCACTATCCCCCTGCATTTGCCTACTTCA TAGCTGGTGGGAACAGAGACAAGAACAGGATATTTAGGTTGTTGCTGGCTATCTATCATCCGAGGAACCGTTACCTGCTT CACCTTGGAATGGATGCTAGGGATGAAGAGAGGCATGAGCTGGCTGCTGCAGTTATGTCGGTGCCGGCAATTCGGGCTTT TGGAAATGTTGATGTGGTGGGGAAGGCTGATTATGTGACCTACTTGGGGTCCTCCAATGTTGCCATCACTCTGAGGGCTG CTGCTATCATGATGAAATTGGATGGTGGATGGAATTGGTTTGTCACATTAAGCGCGCGAGATTATCCCCTCATCACCCAG GATGATCTGTCCCATGTTTTTTCTTCTGTTCGGAGGGACCTCAATTTCATTGATCACACCAGTGACCTTGGATGGAAGGA AAGTGATAGATTCCAGCCTATTGTAGTTGATCCAGCAATATATTTAGCTAGGAGAAGTTCTCCATGGGTCATCTTGAGTC GATCCTTCCTCGAGTTCTGCATTTTCGGCTCGGACAATCTACCTCGATCGCTCCTGATGTATTTTACAAATGTTAAGTTA TCCCAAGAAGGTTATTTTCACTCAGTCATTTGCAACGCACCAGAATTCAAGAACACAACGGTCAACGGTGACTTGCGGTA TATGATCTGGGACAATCCTCCGAAGATGGAACCACACTCCCTAAATGTATCTGTTTACAATCAGATGGTAGAAAGTGGGG CTGCTTTTGCTAGACAGTTTGATGTTGATGACCCTGTACTGGACATGATTGATGCGAAGATCCTCCGGCGCGGGCGTAAT CGAGCTGTGCCGGGAGCGTGGTGCTCTGGCCGGAGGAGCTGGTGGGTAGATCCATGTTCCCAGTGGAATGACGTCAATAT TCTGAAGCCAGGTCCTCAGGCTAAGAAGCTTGAGGAGTCTGTTTCAAGTCTTCTTGATGACTGGAGCTCACAGATCAATC AATGTCAGAATTCAAGTGAAGAGACACAAGAGTAG
Protein sequence (LotjaGi2g1v0060800.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGAEKKWLFTLFTAAFLSLIILMLTSFSCFTSPKPFPSLVQQGAHYPPAFAYFIAGGNRDKNRIFRLLLAIYHPRNRYLL HLGMDARDEERHELAAAVMSVPAIRAFGNVDVVGKADYVTYLGSSNVAITLRAAAIMMKLDGGWNWFVTLSARDYPLITQ DDLSHVFSSVRRDLNFIDHTSDLGWKESDRFQPIVVDPAIYLARRSSPWVILSRSFLEFCIFGSDNLPRSLLMYFTNVKL SQEGYFHSVICNAPEFKNTTVNGDLRYMIWDNPPKMEPHSLNVSVYNQMVESGAAFARQFDVDDPVLDMIDAKILRRGRN RAVPGAWCSGRRSWWVDPCSQWNDVNILKPGPQAKKLEESVSSLLDDWSSQINQCQNSSEETQE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 29 | 29 | 6.0 | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| Phobius | 1 | 31 | 31 | - | – | |
| PANTHER | 3 | 376 | 374 | 3.3E-213 | – | |
| PANTHER | 3 | 376 | 374 | 3.3E-213 | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 7 | 22 | 16 | - | – | |
| Phobius | 23 | 31 | 9 | - | – | |
| Phobius | 32 | 384 | 353 | - | – | |
| Pfam | 50 | 289 | 240 | 8.4E-54 | ||
| Coils | 365 | 384 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi2g1v0060800.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…