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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0066700 |
| Transcript ID | LotjaGi2g1v0066700.2 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glucan endo-1,3-beta-glucosidase-like protein; TAIR: AT2G01630.1 O-Glycosyl hydrolases family 17 protein; Swiss-Prot: sp|Q9ZU91|E133_ARATH Glucan endo-1,3-beta-glucosidase 3; TrEMBL-Plants: tr|I1JD38|I1JD38_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0066700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:15629184..15634737) extracted from Lotus japonicus Gifu genome v1.2.
GAAAAAAATAGAAACAAAACATATAGTAGTACACTACAAATGAAATAATAAAAATTGGACAAAGATGGATTCATTCTCCT TCCACCTCTCACAACACAACTCAAAGTTCCAACCACAAGGCACAAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT CTCTCTCAGGGGGCCTCAATAGTTGCAACCTTTATTTTGTTTCGTTTTTCCCTCCCTCGGGAGTTCCAAGTCTTGTTTTG AGTGTTTCCTGCTCTGGGTCTCTCTCAAATTCAGTGTTCTTCATGTTATAGTGGCTTTTGAAAGCTTTAATGGCTGTGCT GCTGTTGCTTCTTCTTCACCTGCTTGCAATCTCTGTATCTGCTTCTCAAGGTAAGTGTTTTGTTAGTGATTAATCTATCT ACACATACTCTTTGTTGCTATTTCTATTTCATAATGACTAATGAGTTTCATTCCATAGTACTCTTTGGCTTCTAGCTTCT GTTTTTTCCTCATTACACCCACTTCACCTATGAAAGTTGTGATTTTTTTTTTTTCTGTTTATCCCTGTATTCTCCATGTG GGTTTGCATCTTTTTCTCAGTCTATTTTCATAACTTCATTGAAATTGAAATGTCATTGTTTTTTCATGGTTAATCTTAGC TTTTGTTAAGGATATTAATTCTAATCAGTGCTTTGGGCCCTATTAGCTAATGATGAGTGGGTCTTAATCAAATTATTTAA TTTAGGATTAACTGTTTAAGGGCACCTTGCTACAAAGAGTATGACAATGCTGAAATAGAAAGATAGGCAAAAGGTTTCTG TAAAAATAGGTATTTAAATAACTTTTTAAAATTTATCCCTTCCCTTAACAGAGGGTTTTTGTAAGAAAATATTTTCCATT GTTTTAAGCAGAATCTCCGATCTGAACAACAATTTTATATAAGAAAATATAAATGGAACTTTTGGAAGTAATTGCGTCCC AGCTCATCAAACAGTTGTTTTGCAGTTTGCACTTATCATGGTCCATGATAAAATGTTGATTATTCAGGTAGGCAGTATGG GCCTCTTTTGTTTCATTTTCATCTAAGAATATCTAAGCATGTCACTAGCAAGATGAATAATTTGACCTTCTTTTCTTGCC ATATTCTTTTGTTAGAACTATGTGTAATTATGCTATACATTTACCTTCCAGCAATGCTATGTTCCGGAATTCTGACTATA TGGAAAAGTGGGAGTTATAATACTCTTATTCAAGAATAATTTTTTTATACATTTTAGGTTGTGATATATACGTATATTAA CTGTGAGACTAGTGGAACGATTAAATTCCTCAATCTTCTTTTCTAACCTGACTTATGAGATAAGTGGGCAGTTCTCCTTT TCTTGAATCATAATATTCTCAACAAAAATATACAACCTTAGATTGCAGTACTTTCATTTTTAATTTGTGGAACACAGTAA TCTGGTCTAGATTGATTATTTACGTTTACTAATTTATTGAGGGTTTAATTTTAATACAATGTGCGATAATTTATTGTTAT ATGTTACTTAAGATTGTGCTTATAATTTATATCAATAAATATCTTTTTGCTCTCGAAAAAAATGTTACTTAGATTCTGTT TTGGATTATCTTATACCAACTTACAATAGGAATAGCTTATCAGAGTGTTTAGCTTTCGTGACCTTCATTAGAATTTAGAA GCATTTGACATGCTTTTGATGGTATACGAAGAAACTTGAGTTGGAAGAGCACTGTGCTCTGTGCTCTGGAAGATCACTCT CACTGTATCCTTTCAAGAAGCGTAGTCTTGGTTATCCATCCTGCATCATGCTCGGGCTGGCAGCTGGTTGTGTCATTGAT TACTATAGAATATAGCATATACTTTGCTACTCATGGGGATAGAAACAAGTTATTTTCAGTAACCAAAATGGGTTATGTCA TTAGGAAGACATGTTTTGACATCTCTGTGAATTTGACGTCAATGTGTCGTGTTCGACAACAAAGTTCTTTCATTATTATT CATCATTAACAAAGATAAATATGAAAATGGTCCCTGAACTATGAGCGAAAGCTGGTTTTGGTCCCTCACCGGAGTAACTT CCGGAAATAGTCCCTCTGGTGCGGCCAACCACCGTGCTTGAGATTTGGTCCGGCCATTTCCAGCATGGTGGTTCGCCTCA CCGGAGGGACTATTTCCGGAAGTTACACCGGTGAGGGACCAAAACCAGCTTTGGCTCATAGTTCAAGGACCATTTTCATA TTTATCCCTTAACAAAACTATTAATTGAATTTTCCTGTTTAAGCAATTTTCTCTTCCTTATCCAATGAAGATATTGAACA TAGTGAACTATTTTGTTTCTGATTTGATATTGCAAATTTACAAAATCATGTTAGGAGAAAAAAAGGAGCTTACTTTCTCT GTATAATTCCCTGATAGCCTCCCTTTTCTTTGTATCTGAATCTTAGAATTTGTTTGTTGCAAACTCAGTGCTAAGTTTAA CTGCATTCCTTGATGCACCTTGAATTGAGATTGAGTGCTTAAACCTAACTGATCTTGTAAGTAATTGAAGATATTTATTT ACATATCGTGACCGGCTTAAAGAGCTATATGTTTTGGATCATAAACAAAATCCTTTCTTATTTCGCTGTAGCATGTAGAA AAACTCAATGTCCTTCAGTTTATATATCTTTTGGATGGTTCCTTCATTTGCACTACTACTTTTAATATCTCACATTCACA GTTTTATTTCACCAGTTATCATATGGTAATGGTAACTTGCTGTCTTGAAGATGAAAGGCCTATGTCTATTGGGTGCTTTA ATTGTCAAAAGTCCTTCACTTTTGGTCGTTTTTTACTGCAGATGCTTTTATCGGTGTCAACATTGGTACAGATGTCACTA ACATGCCATGTCCAACTGAGGTTGTGGCCCTTCTTAAGGTCCAAAGCATCCAACATGTCAGACTCTATGACGCTGACCGA AACATGCTTCTCGCACTTGCCAAGACAGGAATCAGTGTAATTGTTTCTGTTCCCAATGATGAAATCCTCGGCATTGGCCA GTCCAACACCACGGCCGCCAATTGGGTTGCTCGTAACGTTGTAGCTCATGTCCCAGCCACTAACATCACTGCCATAGCGG TCGGATCTGAAGTCTTAACAACACTGCCAAATGCAGCCCCTGTCCTTGTCTCCGCTCTGAAATTCATCCAATCCGCTCTT GTTGCAGCTAATCTGGACGACCAAATCAAGGTCTCCACCCCACACTCTTCTTCTGTCATCCTCGACTCCTTCCCGCCTTC TCAGGCGTTTTTCAACCGCACTTGGAACCCCGTCATGGTTCCCTTGCTTCAATTTCTGCAGTCAACAGGTTCATATCTTA TGCTCAATGTGTACCCTTATTATGATTACAGGCTATCAAATGATGTGATTCCTCTGGATTACGCTCTGTTCCGTCCCCTG CCTTCGAATAAGGAAGCTGTTGATACCAACACTCTCCTGCATTATACTAATGTCTTTGATGCAGTTGTTGATGCTGCTTA TTTTGCAATGTCATATTTAAATTTCACCAATATCCCTATTCTAGTCACTGAGTCAGGATGGCCCTCCAAAGGTGACTCGT CCGAGCCAGACACAACTCCTGATAATGCGAACACTTACAATAGTAACTTGATCAGGCATGTCCTTAACAACACGGGGACT CCAAAGAAACCGGGAGTTTCTGTTAGCACGTATATTTATGAGCTTTATAACGAAGACTTAAGATCTGGTCCGGTCTCTGA GAACAACTGGGGGTTATTTTATGCTAATGGAGCACCAGTATATACCTTGCACTTGAGTGGTGCTGGTACTATATTTGCAA ACGACACGACGAACCAAACCTTTTGCGTTGCCAAGAATAATGCCGATACTAAGATGCTTCAGGCTGCGCTTGATTGGGCT TGTGGACCTGGGAAGGTGGATTGCTCGCCTTTGCTGCAGGGTCAACCGTGTTATGAACCGGATAATGTTATTTCACATGC TACGTATGCTTTCAATGCGTATTATCAGCTGATGGATAAATCTTCTGGTACTTGTGATTTCAAAGGGGTTGCCTCTGTCA CCACCACAAACCCAAGTAAGAAATCTTTACATTTTATAAATATCTACAAGTTAAGTTGACTACAAAAGAATAAAAATAGT GGTATTCAACTATCCTCGTTGATCAGATTGTTTCTCAAAACTATCTGTTGAAATTATACATTTATATGCCAATTTTATAT GTTTATTATTATTACTATTACTTTTTAAAATGTTATGTGTTTGTTTCTTTAGTCTCTTAGCTTTGCATCAAAGAAATTTA TGATCATTATTTTAATTCCAGTTGCTCCTATGTTTCCTTAGTGATTGCAATCTTTTTACTTATCATTTAGTTTCATTAAT TATGAATAAATCTATGGCCATTTTAGTGGTCATCTCTACTTCACCATTGCTTGTTAGTCCAAGTAATTTGGAGCTTGGTT TCACTTAAGTAACTTGTGTCTGAGTCTTGTAAAAATAAGTGCTAGAAACAGCCGAGTCGAATTAGTCACGGTCCATAGTG GATATTGAGGGTCTACAAAAACTATTCTAGTTACTTTTGCAACCTTTTTTCTTTCTTGGTCATTTTCAGTTGACTTGTAT TGTGTCAAAGAAACTCTTGCATTCGCAGATCTCATTCAAGTTGCTTAGCATTTTAATATAACTGATAGTTTCTGTATTAT CATTGCTACAGGTCATGGTTCCTGTACATTTTCAGGAAGGTATGATGATCTCAAACTTATCTTTATATGTGCTTGTTGTT GTTCTATTTTCCGATTCTATGAGTTGCTTTTCATGTTCTAGTGATGTCTTTTTTTTATTTCTCATCTCATCAACTATAAA AGCTGTCAAGTTGCTGCTGCATGTAAAGATAGCATGTTCTTCTCATTTGAATTTTTTTCTTATATATTTCTCCTTTACGT ATTTGTGGTGAATAGTGGTGGTAAAAATGTTACCAGCATTAATGGCACAGAAGCAGAACTGGCCCCCTCTACCAATTCTA CAAATTCAGGCTCTTTATCACAATGCTACAATGGTGGATCTTTCACAAGCTCTCTCATTCTTGCTTTAATTTTGAGTGCA TTTGTTATGTAAAACTAGATAGATTACTTATGCAGCATTAGAATCTAGTGTATGGAGACACCCTCTTCAAGTTAATTTTG GAAGATTGCAGCATGCCCTATTTTGTGTTCCTCAAGTGGAGGATATGAAGGGCGGCGAGGTAGGTCAAAATGTATATTGG CGATTGTAACATGAGTTGTTCATTGAATTTGTTGTACAAACGAACTAGATGAAGTATTTTACTCATTGCTGTAGGTAGTT TTACCTTGTTAGGGCTCATTTTTTTGGTTTCAATATAATCAGAAAGTCCATTCAAATGCTTGGTATGGTATTCTGATAAT TGCATGCATGGTTGTCAATAATACACTATAGTGGGCACTATGGGCATGTTTAGTTTTCAATTGAAATCCACATTCGTGCA TTGAAATTTGAGAATGCACATTACGGTCTCGTAA
CDS sequence (LotjaGi2g1v0066700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGTGCTGCTGTTGCTTCTTCTTCACCTGCTTGCAATCTCTGTATCTGCTTCTCAAGATGCTTTTATCGGTGTCAA CATTGGTACAGATGTCACTAACATGCCATGTCCAACTGAGGTTGTGGCCCTTCTTAAGGTCCAAAGCATCCAACATGTCA GACTCTATGACGCTGACCGAAACATGCTTCTCGCACTTGCCAAGACAGGAATCAGTGTAATTGTTTCTGTTCCCAATGAT GAAATCCTCGGCATTGGCCAGTCCAACACCACGGCCGCCAATTGGGTTGCTCGTAACGTTGTAGCTCATGTCCCAGCCAC TAACATCACTGCCATAGCGGTCGGATCTGAAGTCTTAACAACACTGCCAAATGCAGCCCCTGTCCTTGTCTCCGCTCTGA AATTCATCCAATCCGCTCTTGTTGCAGCTAATCTGGACGACCAAATCAAGGTCTCCACCCCACACTCTTCTTCTGTCATC CTCGACTCCTTCCCGCCTTCTCAGGCGTTTTTCAACCGCACTTGGAACCCCGTCATGGTTCCCTTGCTTCAATTTCTGCA GTCAACAGGTTCATATCTTATGCTCAATGTGTACCCTTATTATGATTACAGGCTATCAAATGATGTGATTCCTCTGGATT ACGCTCTGTTCCGTCCCCTGCCTTCGAATAAGGAAGCTGTTGATACCAACACTCTCCTGCATTATACTAATGTCTTTGAT GCAGTTGTTGATGCTGCTTATTTTGCAATGTCATATTTAAATTTCACCAATATCCCTATTCTAGTCACTGAGTCAGGATG GCCCTCCAAAGGTGACTCGTCCGAGCCAGACACAACTCCTGATAATGCGAACACTTACAATAGTAACTTGATCAGGCATG TCCTTAACAACACGGGGACTCCAAAGAAACCGGGAGTTTCTGTTAGCACGTATATTTATGAGCTTTATAACGAAGACTTA AGATCTGGTCCGGTCTCTGAGAACAACTGGGGGTTATTTTATGCTAATGGAGCACCAGTATATACCTTGCACTTGAGTGG TGCTGGTACTATATTTGCAAACGACACGACGAACCAAACCTTTTGCGTTGCCAAGAATAATGCCGATACTAAGATGCTTC AGGCTGCGCTTGATTGGGCTTGTGGACCTGGGAAGGTGGATTGCTCGCCTTTGCTGCAGGGTCAACCGTGTTATGAACCG GATAATGTTATTTCACATGCTACGTATGCTTTCAATGCGTATTATCAGCTGATGGATAAATCTTCTGGTACTTGTGATTT CAAAGGGGTTGCCTCTGTCACCACCACAAACCCAAGTCATGGTTCCTGTACATTTTCAGGAAGTGGTGGTAAAAATGTTA CCAGCATTAATGGCACAGAAGCAGAACTGGCCCCCTCTACCAATTCTACAAATTCAGGCTCTTTATCACAATGCTACAAT GGTGGATCTTTCACAAGCTCTCTCATTCTTGCTTTAATTTTGAGTGCATTTGTTATGTAA
Protein sequence (LotjaGi2g1v0066700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVLLLLLLHLLAISVSASQDAFIGVNIGTDVTNMPCPTEVVALLKVQSIQHVRLYDADRNMLLALAKTGISVIVSVPND EILGIGQSNTTAANWVARNVVAHVPATNITAIAVGSEVLTTLPNAAPVLVSALKFIQSALVAANLDDQIKVSTPHSSSVI LDSFPPSQAFFNRTWNPVMVPLLQFLQSTGSYLMLNVYPYYDYRLSNDVIPLDYALFRPLPSNKEAVDTNTLLHYTNVFD AVVDAAYFAMSYLNFTNIPILVTESGWPSKGDSSEPDTTPDNANTYNSNLIRHVLNNTGTPKKPGVSVSTYIYELYNEDL RSGPVSENNWGLFYANGAPVYTLHLSGAGTIFANDTTNQTFCVAKNNADTKMLQAALDWACGPGKVDCSPLLQGQPCYEP DNVISHATYAFNAYYQLMDKSSGTCDFKGVASVTTTNPSHGSCTFSGSGGKNVTSINGTEAELAPSTNSTNSGSLSQCYN GGSFTSSLILALILSAFVM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 18 | 18 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 18 | 18 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 18 | 18 | - | – | |
| Phobius | 1 | 2 | 2 | - | – | |
| Phobius | 1 | 18 | 18 | - | – | |
| Phobius | 3 | 14 | 12 | - | – | |
| PANTHER | 6 | 456 | 451 | 2.7E-269 | – | |
| PANTHER | 6 | 456 | 451 | 2.7E-269 | – | |
| Phobius | 15 | 18 | 4 | - | – | |
| Phobius | 19 | 478 | 460 | - | – | |
| Pfam | 24 | 344 | 321 | 1.8E-77 | ||
| SUPERFAMILY | 24 | 344 | 321 | 2.72E-84 | ||
| Gene3D | 24 | 345 | 322 | 5.6E-119 | – | |
| ProSitePatterns | 258 | 271 | 14 | - | ||
| SMART | 360 | 445 | 86 | 6.5E-49 | ||
| Pfam | 361 | 431 | 71 | 2.7E-19 | ||
| Phobius | 479 | 498 | 20 | - | – | |
| Phobius | 499 | 499 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi2g1v0066700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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