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LotjaGi2g1v0075500.2

Overview

Field Value
Gene ID LotjaGi2g1v0075500
Transcript ID LotjaGi2g1v0075500.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description uridine kinase/uracil phosphoribosyltransferase 1; TAIR: AT3G27440.1 uridine kinase-like 5; Swiss-Prot: sp|Q9LTY6|UKL5_ARATH Uridine kinase-like protein 5; TrEMBL-Plants: tr|A0A1J7HJ27|A0A1J7HJ27_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0075500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:19759442..19763992) extracted from Lotus japonicus Gifu genome v1.2.

AAACCATGGTATCTCATACCCTATTATTAACAAAGTAGTTGAATAAATTAATTTTGATACATTATATTATATATTTCATT ACATAGTGTTTATGAAAGCCTCATCATTTTTCAATGCATTATGTTGATATAATGTGCAAGTTATTGCTTCTTTTTGTCAC TTCTAGGTTCACCCTGCAGACATCATAATTTTAGAAGGAATATTAGTTCTTCATGATCCTCGTGTTCGTGATATTTTGAA CATGAAGATTTTTGTTGATGAAGGTTGGTTATTATCGAATTTCTCTCTGATCTATGCAAAAACTACTTGAAAAAAATAAT TAATTAAATATGTTTACATTAATGAGCATATTGTTTGAATAATTATGGTATTAATGTTGAGCATTGTAGCGACATCATAA ACTTCATTTGCAATCCTCAAAATGGGGGATATCCTCTTTGATTATCACAAAAAAAACATTTGAGGTTTTTTATTTGCTTC ATTTTTTGATTCATGATTTTTGAAAATATAGCAATAGCGTAGCATCTTAAATTTAAAAGAACGATGTAGTATAATATTTT TTTCTTATTTATATTTAATAATGGTTTAAAATTTTCTAACATGCAGTTAATATATTATTCTCAATGAACTGATGGCCTTA AACCCATGATTAGTAAAGTACAACAAATATATAGTTAAAATTGTCGTGGTTTAAGCAATGTAGATTCTGATGTTACTTCA AAAAAAAAAATGTAGATTCTGATGTGCGTCTTGCACGAAGGATTCAACGTCTCTCTATTGAACGTGGGAGGAACATTAAA AATGTTCTAGATCAAGTAAGTAAACTTTCTTTATCTTATCTATACTTGCATAATTTGCCTTTAAATTTGAAGTTCCGAAG GCAAGTTTGGTAACATTTGAGAGAAGAAATCATGCATGTGTATGAAATTAAGTGATGATATTTATTTGAGAAATGTTAAT GACACAATCTTTTTCAAATAGTAGACACCTAGATACACTCTATATGCAATATGTCTACTATCTTTTGACTCACTTCTTAA TATATTTCATATATTTACAATGATACATGTCAAAAGCCAAAAAATGAAATGAAAAGAAAAAAAATGAAAAAAAGAAATAA TATTTGATTTCTTTGATTTTGAGATTAAATTATGATCTTATGTGTTAATTTGATTTAATATTTCTAAATCGTGATTGAAG TTAAGTTGGAAATACAAATATAAGTCAATCTATATTGTCAAGGATATAATTATGCATTATTAATCATATTGAAAAAGTAC AACTAGATGTCAAAATAGATAAAGTACAATTAATGATTAGTAATTTTGTAACTCTTTGTTAACACATTTATTCAAATTTG ATAAAAAAAAGTTTAAAATCCTCTTTGACTAATTAAAATACAAATGTTCAGTATTCCAGATTTGTAAAGCCCAGTTTTGA AGATTTTGTAATGCCAACAAAAAAATACGCGGATATAATCATTCCAGGTGGAGGAGATAATGATGTAGCTGTTGACTTGA TAGTACAAAATATACGCACAAAGCTTGGCCAGCATGATTTGTGTAAAATATATCCAAATATTTTTGCTATTGCTTCAAAT TTTCAGGTAAAATCTCATAGTTATATTCTATTTGGTATAGAAATAGTGTGGATAAAGAAATGTTAGGATTGTCAAAATGA TAATTATGCAAATAAAACTAAATAAATATCTTTGTTTGTACTCAGATAAAGGGAATGCATACTCTCATTCGTGATTCTAG AACAACAAAGCATGATTTTGTCTTTTATTCAGATCGTCTAATTAGGCTGGTAAGTAATTTTAATAATAAAAGTAGTCATG AAAATAGACATAATTGTGATGCATGATTGCTTTATATTGATTTGTTAAGGTCGTCGAACATGGATTGGGTCATCTTCCTT TTACTGAAAAGCAGGTCATGACACCAACAGGTATCCTTCTCATCATAAACACGTGGTTATTCAACTATACATGAAAAAAA ATGTAAATAGTTTCTTTAACACATTATTTAAGCACAACTTTTATACTTGATTTAATCTCTAGAAGGTCTACACTCCACAA ATTCTTAACAAAGCTATCTTATGCAAATAAATTAAATTTTTATGAGATTGCTAATGAAAGCCATGTTAGAAAAAAATATA TATTTAGAGTATCTATTCATAAATTATGTTTCAGTAGACTATTTCCAAGAATCATTAATATAAGTCACCAAATGGTAATG AGAACGTAAATTTATAATCATTGCAAACTTTACATTGCTTTAGGTTAAAGTATCCTTAATATTTGTGCTCCGGCTGCAGG AGTTGTATACTCTGGTGTAGTTTTCTGCAGCAGGTTGTGCGGTGTATCAGTTATTAGAAGGTAAGTTCTTAATTAAAAAA AATTAATCCATTTATTATTAAAAGAAATTGTATTATATGATAGATTTGATTCCATGTATTTCTATTAAATGTATTAAGAT ACCATAAGTTTGAGTTCAAAATTGAGCTTTATCAAGTGAGACTTCTTGTTCTTTTTTTTTTCTTTCTGAGATATGCTATC CACAAAAACTAAAATTCTCATTTAGAACGTCAAGACTATTTCATAATTTTTTTACTTTTATGAAATTTGGAGTCATAAAT GAAGATTTCTAACCAAGATTTAGTTGTAGTTCTCGAAACTAGAAATGAAAATTTAAATATTTCATGTTTGAGTCAATTTA TAATCCTCCCATAGTCACTTCTCTATGTTTAAAATACACATAAAGTAGCATTTCTCATATCAACTTTTATTCAATAATTT TTTTTTTGAAACATTTCCCTTTGAACTTTAATATCAGTGGAGAAAGCATGGAAAATGCATTAAGAGCATGTTGTAAAGGA ATCAAAATTGGAAAAATCCTTATTCATGGACAAGGCACGAATGGTCGACAGGTTGGTTGAGGTCAACACATCATCCTCCT TTAACTTTTCTATATTTTATTTTTCTCTCATTAATTTACAATGTGATGTAGTTAATTTACGAGAAGCTCCCCAAAGACAT TGCTAGTCGCCATGTGTTGCTACTTGATCCAGTTCTCGCTACAGGTTTAAAAATTCGTATTGCATAGTTCTTTATTAGGT TATGATATGCATAGTGAATTCAAAATCGATAATCTATCTTTGTCATTTAGTTAATGAGATAATTATTATTTCTAGCTAAA ATTTGATGTTTTTCACTTTTGTTTTTGGTTTATATATAAGTAAAATATAAATATGATGTTAACTAGATAAAGATACAAGA TGTTTTGTCTCCAAATGATGTCTCAATTTCATGTTCCACAAATTAAATCCTGAAATGTCAATATAAAAAAACAAGAGTGG GGTTGAAATGACAAAATAGATAATCTACATTTGTCATTTATTTAATGAGATAAAAATTATTTCTATCTGCAATCTTTTGT TCTTCACTTTTGTTTTTCTAGTTTATATATAAGTAAAATATAAATATGATTATAACTAGATAAATCTACAAGATGTTTTG TCTCCAAATTATGTCTCAATTTCATGTCTCACCAATGAAATCTTGAAATGTCAATAAGAAAAGGCAAGAGAGGGGTTGTT GCTAACTCATGATAATATTTTTATAGGAATCAATTTCCTACCAAGCTAGGTCAACAACTTACAAAAAATTAAAGAAGAAA TGAAATTAGAGAGAAATGCTCATTTTCTGGGTTATTTATTCAACAACAAAAGGTCTATTTAAAGCTAAACCTAAAGGGTG GCCAACAAGTGAAAACATCCTCGCACTTAATATATTATATAAACATAAAATCATATTAAAACTAGAATTCATAAAAAAAT CATATAAAATGTTTCAGTCTTTGAGACTCGTGGGCCTAGCTGAATATGTTATGTTTGACCCTATAACCTACTACCCATTT TTAATTGACATGGCAACATTTTATTTGCGGATAAAGATGAGACAAATTTCATAGGAAATGATTTAAATCCAATAGTGAAA TGGTAGGATTTTTCCAATTGATGTTAACTTTTTGAGTCTTAATTATTACTGTAGTTTGTATTGCTATAATAACGTTTGCT TTGTCCTTAATTTTTTTGTTGTTATGCTAATTAAATATTTATATCATAACTTTATGACTTCTGATTTTTGAAATTCTCTA TCTCGTTGAGTATAAGTTCCATCATATTCGTACATTCCAATACTTTCTTGCACTATCTAATAGTTATAATTTACAGGAAA TTCTGCAGTTAAAGCTATTACTCTACTTCTTAAGAAGGGTGTCCCAGAATCAAACATCATATTTCTAAATTTAATAGCAG TGAGCCACTTTGACTTGCTACGTCATAGATCAACACTTGCCTGGTTTTCTACACTATTTGTACTAACTACGCAGCATGAT GCAGGCACCACAAGGAATAAATGAAGTTTGTGGGAGATTTCCAATGCTAAAACTTGTGACATCAGAGATTGATGCGTCAC TAAATGAGAATTCTCGTGTGATACCTGGGTTGGGTGAGTTTGGCGATCGTTACTTTGCCACTGATGATTAG
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0075500.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAAGATTTTTGTTGATGAAGATTCTGATGTGCGTCTTGCACGAAGGATTCAACGTCTCTCTATTGAACGTGGGAGGAA CATTAAAAATGTTCTAGATCAATATTCCAGATTTGTAAAGCCCAGTTTTGAAGATTTTGTAATGCCAACAAAAAAATACG CGGATATAATCATTCCAGGTGGAGGAGATAATGATGTAGCTGTTGACTTGATAGTACAAAATATACGCACAAAGCTTGGC CAGCATGATTTGTGTAAAATATATCCAAATATTTTTGCTATTGCTTCAAATTTTCAGATAAAGGGAATGCATACTCTCAT TCGTGATTCTAGAACAACAAAGCATGATTTTGTCTTTTATTCAGATCGTCTAATTAGGCTGGTCGTCGAACATGGATTGG GTCATCTTCCTTTTACTGAAAAGCAGGTCATGACACCAACAGGAGTTGTATACTCTGGTGTAGTTTTCTGCAGCAGGTTG TGCGGTGTATCAGTTATTAGAAGTGGAGAAAGCATGGAAAATGCATTAAGAGCATGTTGTAAAGGAATCAAAATTGGAAA AATCCTTATTCATGGACAAGGCACGAATGGTCGACAGTTAATTTACGAGAAGCTCCCCAAAGACATTGCTAGTCGCCATG TGTTGCTACTTGATCCAGTTCTCGCTACAGGAAATTCTGCAGTTAAAGCTATTACTCTACTTCTTAAGAAGGGTGTCCCA GAATCAAACATCATATTTCTAAATTTAATAGCAGCACCACAAGGAATAAATGAAGTTTGTGGGAGATTTCCAATGCTAAA ACTTGTGACATCAGAGATTGATGCGTCACTAAATGAGAATTCTCGTGTGATACCTGGGTTGGGTGAGTTTGGCGATCGTT ACTTTGCCACTGATGATTAG
Download CDS Sequence

Protein sequence (LotjaGi2g1v0075500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MKIFVDEDSDVRLARRIQRLSIERGRNIKNVLDQYSRFVKPSFEDFVMPTKKYADIIIPGGGDNDVAVDLIVQNIRTKLG QHDLCKIYPNIFAIASNFQIKGMHTLIRDSRTTKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVMTPTGVVYSGVVFCSRL CGVSVIRSGESMENALRACCKGIKIGKILIHGQGTNGRQLIYEKLPKDIASRHVLLLDPVLATGNSAVKAITLLLKKGVP ESNIIFLNLIAAPQGINEVCGRFPMLKLVTSEIDASLNENSRVIPGLGEFGDRYFATDD
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.40.50.300
1 81 81 6.5E-21 –
PANTHER
PTHR10285:SF75
1 297 297 1.7E-165 –
PANTHER
PTHR10285
1 297 297 1.7E-165 –
SUPERFAMILY
SSF52540
1 71 71 1.33E-12
IPR027417
Pfam
PF00485
1 67 67 8.0E-17
IPR006083
PRINTS
PR00988
10 20 11 7.3E-11 –
PRINTS
PR00988
24 35 12 7.3E-11 –
PRINTS
PR00988
46 59 14 7.3E-11 –
SUPERFAMILY
SSF53271
81 297 217 1.04E-55
IPR029057
Gene3D
G3DSA:3.40.50.2020
82 297 216 1.7E-81
IPR029057
Pfam
PF14681
96 297 202 3.5E-73 –
CDD
cd06223
160 270 111 5.94319E-11
IPR000836

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0009116
Biological process Nucleoside metabolic process The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine).
Subterm of
GO:0016301
Molecular function Kinase activity Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0075500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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