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LotjaGi2g1v0098600.1

Overview

Field Value
Gene ID LotjaGi2g1v0098600
Transcript ID LotjaGi2g1v0098600.1
Related isoforms 6
Lotus japonicus genome version Gifu v1.2
Description Beta-glucosidase; TAIR: AT5G04885.2 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|A0A151UE06|A0A151UE06_CAJCA Lysosomal beta glucosidase; Found in the gene: LotjaGi2g1v0098600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:32264201..32269398) extracted from Lotus japonicus Gifu genome v1.2.

ATTGGCTCTTTCATTTGGCTTTGTTTCTGATTGCTATTTTGTCAGAAAATAAAAAAGGACAAACCTCAGGTTTTCAAACG TGTTGTTAACGTGGATACTTTACGACATGCCTATATAAACTAATTCTCATCCTCGTGAAAGAACAAAGATTGAGTCTTTC TACCTCTTTGTTGTTATGAAAAGATTGGTAAGTGGGTGTTCATCATTCTTTTAATCTATGTAATGTTCAATGTTGATCTG GGTTGTTTTTAAATTTCATGGCTCAATTTGAAATTATTCAATTTTTTGCACTGTTCTAGAGTTATTATTTGCAGTTCATA ATTTCCAAAGAATAAGTGTAGACTTGGTGTAGTTGTTTAGCTTCACTTTTCATTTGGATTCTGTTATGTTTGCCTTATAT TTTTTTTTTATTTTGGTGGTGGATTGTTGTGAATCTTGTTCTGATTTTATACTGAAGTTGTGTTGAGGAGAAGAAATGGC CAAAGTTGTCATCTTTTTTGTGGGGCTTGTGCTCTTGCACTGTTGGGTAGCCATGGCAGAGGCAGAGTATTTGAAATACA AAGATCCAAAACAGCCTCTGAGTACACGAATCAAGGACCTTATTAACAGGATGACTTTAGAAGAGAAAATTGGCCAGATG GTGCAGATTGATCGCAGTGTTGCTTCTGCTGATGTGATGAAGAAGTATTTTATTGGTAAGATTCATCTTTGTGTTTTCTA ATTTGCCAAATCCTTGACATATTGGAATATATGATTATTTTATTTATGACATATTTACTTAATGAGTAATTTTTATTAGG GAGTATGCTAAGTGGGGGTGGCAGTGTTCCCAAGCAACATGCTTCTGCAGAGGATTGGGTTGACATGGTGAATGATTTTC AAAAGGGTGCTTTATCTACTAGGTTGGGAATTCCAATGATATATGGGATTGATGCTGTTCATGGCCATAACAATGTCTAT AGAGCAACCATTTTTCCTCACAATGTTGGTCTAGGAGCTACCAGGTAAATCACCACTATGCTTATGTACACCATTTTAAT TAGTTTCAAGTGGTTATGCTCTTCCCTATATCAGTATGAGTGATAATCAAAATATTCAATTTAAAACTAATTTAATCATG GTTTCACTGGTTTAGCTAAATGGATATCCAATTTGGTGTTTAGATTAATGCTGTAAATTATTCTTTAGTTGCTTTTTTAA CCTTTTGTTATATCTTAATCTTCAAACTTTTTGGCTTAACTATTATTTTGGTTCTATAGTTTTACATGATCTTTTTCTCT ATTGTTTCAATTGCTCTAATTAAGCAAAAGTTAACTAATTTACGTAACAGTTTCTAATTTTTTCTTTTTTGAACTGATTT ACTGATTAACTTTTTTTTGACTGTCATGTTTAGACACATTATGTCACTTTTTATGTAAAAAATTGTGATATATTTCAATT TTTTCTGTCAGTTATTGAATGACAACTTAGCATATGTACCAAATTTGTTCAATTTTAAAAGGATATGGACTTAATTGGAA AAATTGAAACTATAATAATCAAAACCACGCATTCACAAAACTATAACGATGAAAATTGTAAGTAAGCCCTTTTATATAGG TGATGTTGAAAAACAGTGCAAACTTGTCTTTCCAAAAAGTTGATAGGAAGAGTTAACTAGGCATAGGCTTTCTTGAGTGA ATCAGATTATATATACATATATTGTTACTATATTAATATGTATCTTCATGACAAAGTTTTAACCTAAACATATAGAGACC CTCAACTGGTGAAGAAGATTGGAGAAGCAACTGCACTTGAAGTTAGAGCAACAGGAATTCAATATGCTTTTGCTCCTTGC ATAGCGGTAATTGAGAAATGCCCATTATGCGTTTTTCTTGAGTGTCTTGTTATTGATAAGTCTCACATTCACTAGAAATA TGGCTAACTAAGTATTTAAAAAGGGTAGAGAAACGCTCGTTCCGAAATTCGCTTTTAGATTAGAGTTAAGTCTGACTCAA ATTCTAATACTTACTTGATAAACATATCTCTGTTTTTATAGGTTTGCCGAGATCCTAGGTGGGGCCGATGCTATGAAAGT TATAGTGAAGATCATACAATAGTTCAAGCTATGACTGAGCTCATTCCAGGACTGCAAGGTGACATCCCAGCAAACTCACC AAAGGGAGTTCCATTTGTTGCTGGAAAGTAAGAATTCATGTCTTGCAGTAGGTAGTTTAGTTTCATATGCTTGTTTTCTC CCTGAGAAGTGATTGGTGGCTTGAATTTTTTAGCCACAAATATGACATGACAAATTTTTGAATTAACCAATCACAGCTAA AGTCATTAATGGGGTCCAGAAATAAAAACAACAATGATATAAAATCAACCAATAAACATCACCAAGGCACAGAGATGATT TTTCGTCTCGTGCTATCACGCATTTTCCTTTCTGCCTAACGACTTATGGTTGAGAAGTTTCATATTGACTAACGATATGG CCAATATAGTCCTTATAAAGGGTAGAGCAAGCATCACCTCTAACCTAGCTTTTGGGGTAGAATAAGACTTAACCCAAATT AAGATGGTATCATAGCCTATCCTATACCGATTTATCGAAAACCACCAATACTTGTTTTATTCTTCATAGGTCATATCAAA TGTTGTCTGTCATTGCTTTTCATGTTGATTATTTTGTTAATTTTAGATCTTTCTTCTTCAATTCTTAACTTTTCCTTTAT ATTTTTGACAATGATGGAATTTGTCTCAGCGTTAGCGTTTGATGTGCTGGGATTTTTTTTTTCACAGGAATAAAGTTGCA GCTTGTGCTAAGCACTATGTTGGTGATGGTGGAACAACAAAAGGAATAAATGAGAACAACACAGTGATAGACAGACATGG GTTGCTCAGCATTCACATGCCAGCATACTATAAGTCAATCATTAAGGGTGTGGCAACCATCATGGTCTCTTACTCCAGCT GGAACGGAGAAAAAATGCACGCTAATCGTGATCTAGTCACCGGCTTTCTAAAGAACAAACTTCGTTTTAGGGTAACAATT TACCTCCTCTACTTTTGAATTAGGCTTGTGGAAGCCAACGTAAAATTGACCGACCTCAATCAAAAGAATAAGGCCTTAGT TACGTGTTATGTGTAATCACAACATTGATTTCGGCCTAAAGGTCTTTGTTTATGAATCATCACATTAATAGAGTCCTAAG AAATGTATCTGTTTGTTTCAGGGTTTTGTCATATCAGATTGGCAGGGAATTGACAGGATAACTTACCCTCCTCATGCAAA CTATACATATTCCATTCAAGCCGGAGTCAGTGCTGGTATTGACATGGTAAGCTAAGACCCCTTTTGGATACCGACCAAAA AGCAATTATTGGAGCTTATTTATTGTTTTTCAAGAAAACAACAATAAGTGGTGCTCTTTAGTCTTCAACCAAACAAGGTC CAAGAGTTTCATGTTTGTTGCCTATGCATAGCCTTATTTGATTTTTAACAATGCATATATCATTTTTTACTCTTAAATTG ATTTCATAATGCTGCAGGTAATGATTCCCTATAACTTCACAGAACTCATTGATGGCCTAACCATGCTGGTGAAAAATAAT TTCATACCAATGAGTCGAATTGATGATGCAGTTAAGAGAATTTTGAGGGTCAAGTTTGTTATGGGTCTATTTGAGAATCC ATTGGCTGATTATAGTCTAGTGAGCCAGCTTGGGAGCCAGGTAATTAAACAATCACTTGGTCATGTATAAATATGTTGCT TCATATATTCATTTATACCCAGGGGTCATCTATAATTTGACAGGAGCATAGAGATTTGGCTAGGGAAGCTGTGAGAAGAT CATTAGTCTTATTAAAGAATGGAGAAAGTGTTGATGAACCATTGCTCCCTCTTCCTAAAAGGGCTTCAAAAATACTTGTT GCTGGAACCCATGCTAATAATCTAGGCTATCAATGTGGTGGATGGACCATTGAATGGCAAGGACTCAGTGGCAACAACCT TACTAGTGGTAATACTATACATTCCGTCTAAACTTTGTGTGTGTACATGTTTGGTTTCTTGTTAGGAAATCCTATAATCA ATTCTGGTAGAGTAAAAATAAATTCAGGAAGAAAATATTAATATTTAGGAGTATTTTGGAGAATTTATTTCAAACTCAAA ATAATTGTGATAGAAGCTAGAGAGTGTAGATTTTGCATTGAACATAAATTTTACAACTGAATTGCATAACATTACACAAC AAAAATCACTTATTCACTTTGAACTTACTTTTACTATAACCAATTTTAACAAAATCAATTATGACAAATGCTTATCCGAA CACGTGGAGTAAATTTTGTGAGTAGCTTATGAGTTTCAGAATTGATTCTAGTGAATATGAAGCTCATCCATACATGCTAT ATTTTCCTTACCTTGTTGCACTGAGAATACAATGCTGACACTTATGGCTTATCTGATGTACAGGTACCACAATTCTGAGT GCTATCACAAGCACAGTTGAGGAAGATACAGAGATAGTCTACAAGGAGAACCCTGATCTAAACTATGTGAAGTCCAATAA CTTTTCATATGCTATTGTGGTAGTTGGAGAAACTCCATATGCTGAAACCAATGGTGATAGCTTGAATTTGACCCTCTCTA ATCCTGGTTCTGAGATCATAAACAATGTTTGTGGAGGAGTGAAGTGTGTTGTTGTGCTTATCACTGGTCGCCCTGTGGTT ATGCAGCCATATCTTGATGCAATTGATGCCCTTGTTGCTGCTTGGCTCCCTGGTAGTGAAGGTCAAGGTGTGAGTGATGT GTTATTTGGTGACTATGGGTTCAGTGGAAAGCTCCCAAGGACATGGTTCAAGAGTGTTGATCAGTTGCCTATGAATGTTG GAGATCCTCATTATGACCCATTATTCCCATTTGGATTTGGCCTAACAACCAAACCCAACAAAGCCAATTAAAAATTCAAC ATAGTTGCCTCTTTTACCATTCTTCTCCATTGTTTATTATTATCAACAAAATTAATGCAAAATAAACATGCAATTTTATG ATGGTGCATAAAATATCTAAGAAGTGTTTAATTTTTTTTTCTTCGACAGATTGTGGCGGTAATAAACAGCCTCAATCTCT ATGGGTGGTCGAATCATGGTCGTATGTCCACAAATTGCTACATTCAACTAAAGTTATAAAGACAAAAGCCAACATAGC 

CDS sequence (LotjaGi2g1v0098600.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCCAAAGTTGTCATCTTTTTTGTGGGGCTTGTGCTCTTGCACTGTTGGGTAGCCATGGCAGAGGCAGAGTATTTGAA ATACAAAGATCCAAAACAGCCTCTGAGTACACGAATCAAGGACCTTATTAACAGGATGACTTTAGAAGAGAAAATTGGCC AGATGGTGCAGATTGATCGCAGTGTTGCTTCTGCTGATGTGATGAAGAAGTATTTTATTGGGAGTATGCTAAGTGGGGGT GGCAGTGTTCCCAAGCAACATGCTTCTGCAGAGGATTGGGTTGACATGGTGAATGATTTTCAAAAGGGTGCTTTATCTAC TAGGTTGGGAATTCCAATGATATATGGGATTGATGCTGTTCATGGCCATAACAATGTCTATAGAGCAACCATTTTTCCTC ACAATGTTGGTCTAGGAGCTACCAGAGACCCTCAACTGGTGAAGAAGATTGGAGAAGCAACTGCACTTGAAGTTAGAGCA ACAGGAATTCAATATGCTTTTGCTCCTTGCATAGCGGTTTGCCGAGATCCTAGGTGGGGCCGATGCTATGAAAGTTATAG TGAAGATCATACAATAGTTCAAGCTATGACTGAGCTCATTCCAGGACTGCAAGGTGACATCCCAGCAAACTCACCAAAGG GAGTTCCATTTGTTGCTGGAAAGAATAAAGTTGCAGCTTGTGCTAAGCACTATGTTGGTGATGGTGGAACAACAAAAGGA ATAAATGAGAACAACACAGTGATAGACAGACATGGGTTGCTCAGCATTCACATGCCAGCATACTATAAGTCAATCATTAA GGGTGTGGCAACCATCATGGTCTCTTACTCCAGCTGGAACGGAGAAAAAATGCACGCTAATCGTGATCTAGTCACCGGCT TTCTAAAGAACAAACTTCGTTTTAGGGGTTTTGTCATATCAGATTGGCAGGGAATTGACAGGATAACTTACCCTCCTCAT GCAAACTATACATATTCCATTCAAGCCGGAGTCAGTGCTGGTATTGACATGGTAATGATTCCCTATAACTTCACAGAACT CATTGATGGCCTAACCATGCTGGTGAAAAATAATTTCATACCAATGAGTCGAATTGATGATGCAGTTAAGAGAATTTTGA GGGTCAAGTTTGTTATGGGTCTATTTGAGAATCCATTGGCTGATTATAGTCTAGTGAGCCAGCTTGGGAGCCAGGAGCAT AGAGATTTGGCTAGGGAAGCTGTGAGAAGATCATTAGTCTTATTAAAGAATGGAGAAAGTGTTGATGAACCATTGCTCCC TCTTCCTAAAAGGGCTTCAAAAATACTTGTTGCTGGAACCCATGCTAATAATCTAGGCTATCAATGTGGTGGATGGACCA TTGAATGGCAAGGACTCAGTGGCAACAACCTTACTAGTGGTACCACAATTCTGAGTGCTATCACAAGCACAGTTGAGGAA GATACAGAGATAGTCTACAAGGAGAACCCTGATCTAAACTATGTGAAGTCCAATAACTTTTCATATGCTATTGTGGTAGT TGGAGAAACTCCATATGCTGAAACCAATGGTGATAGCTTGAATTTGACCCTCTCTAATCCTGGTTCTGAGATCATAAACA ATGTTTGTGGAGGAGTGAAGTGTGTTGTTGTGCTTATCACTGGTCGCCCTGTGGTTATGCAGCCATATCTTGATGCAATT GATGCCCTTGTTGCTGCTTGGCTCCCTGGTAGTGAAGGTCAAGGTGTGAGTGATGTGTTATTTGGTGACTATGGGTTCAG TGGAAAGCTCCCAAGGACATGGTTCAAGAGTGTTGATCAGTTGCCTATGAATGTTGGAGATCCTCATTATGACCCATTAT TCCCATTTGGATTTGGCCTAACAACCAAACCCAACAAAGCCAATTAA 

Protein sequence (LotjaGi2g1v0098600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAKVVIFFVGLVLLHCWVAMAEAEYLKYKDPKQPLSTRIKDLINRMTLEEKIGQMVQIDRSVASADVMKKYFIGSMLSGG GSVPKQHASAEDWVDMVNDFQKGALSTRLGIPMIYGIDAVHGHNNVYRATIFPHNVGLGATRDPQLVKKIGEATALEVRA TGIQYAFAPCIAVCRDPRWGRCYESYSEDHTIVQAMTELIPGLQGDIPANSPKGVPFVAGKNKVAACAKHYVGDGGTTKG INENNTVIDRHGLLSIHMPAYYKSIIKGVATIMVSYSSWNGEKMHANRDLVTGFLKNKLRFRGFVISDWQGIDRITYPPH ANYTYSIQAGVSAGIDMVMIPYNFTELIDGLTMLVKNNFIPMSRIDDAVKRILRVKFVMGLFENPLADYSLVSQLGSQEH RDLAREAVRRSLVLLKNGESVDEPLLPLPKRASKILVAGTHANNLGYQCGGWTIEWQGLSGNNLTSGTTILSAITSTVEE DTEIVYKENPDLNYVKSNNFSYAIVVVGETPYAETNGDSLNLTLSNPGSEIINNVCGGVKCVVVLITGRPVVMQPYLDAI DALVAAWLPGSEGQGVSDVLFGDYGFSGKLPRTWFKSVDQLPMNVGDPHYDPLFPFGFGLTTKPNKAN 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 23 23 -
SignalP_EUK 1 23 23 -
SignalP_GRAM_POSITIVE 1 21 21 -
Phobius 1 3 3 -
PANTHER 4 627 624 0.0
PANTHER 4 627 624 0.0
Phobius 4 14 11 -
Phobius 15 23 9 -
Gene3D 21 396 376 5.3E-152
Phobius 24 628 605 -
SUPERFAMILY 26 411 386 1.26E-122
Pfam 47 375 329 1.0E-68
PRINTS 108 124 17 1.0E-24
PRINTS 132 151 20 1.0E-24
PRINTS 178 194 17 1.0E-24
PRINTS 224 240 17 1.0E-24
PRINTS 294 312 19 1.0E-24
Gene3D 397 625 229 5.5E-90
Pfam 412 621 210 1.4E-36
SUPERFAMILY 412 621 210 1.7E-60

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Hydrolase activity, hydrolyzing O-glycosyl compounds Catalysis of the hydrolysis of any O-glycosyl bond.
Biological process Carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0098600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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