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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0098600 |
| Transcript ID | LotjaGi2g1v0098600.6 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-glucosidase; TAIR: AT5G04885.1 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|A0A151UE06|A0A151UE06_CAJCA Lysosomal beta glucosidase; Found in the gene: LotjaGi2g1v0098600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:32264448..32268923) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCCAAAGTTGTCATCTTTTTTGTGGGGCTTGTGCTCTTGCACTGTTGGGTAGCCATGGCAGAGGCAGAGTATTTGAA ATACAAAGATCCAAAACAGCCTCTGAGTACACGAATCAAGGACCTTATTAACAGGATGACTTTAGAAGAGAAAATTGGCC AGATGGTGCAGATTGATCGCAGTGTTGCTTCTGCTGATGTGATGAAGAAGTATTTTATTGGTAAGATTCATCTTTGTGTT TTCTAATTTGCCAAATCCTTGACATATTGGAATATATGATTATTTTATTTATGACATATTTACTTAATGAGTAATTTTTA TTAGGGAGTATGCTAAGTGGGGGTGGCAGTGTTCCCAAGCAACATGCTTCTGCAGAGGATTGGGTTGACATGGTGAATGA TTTTCAAAAGGGTGCTTTATCTACTAGGTTGGGAATTCCAATGATATATGGGATTGATGCTGTTCATGGCCATAACAATG TCTATAGAGCAACCATTTTTCCTCACAATGTTGGTCTAGGAGCTACCAGGTAAATCACCACTATGCTTATGTACACCATT TTAATTAGTTTCAAGTGGTTATGCTCTTCCCTATATCAGTATGAGTGATAATCAAAATATTCAATTTAAAACTAATTTAA TCATGGTTTCACTGGTTTAGCTAAATGGATATCCAATTTGGTGTTTAGATTAATGCTGTAAATTATTCTTTAGTTGCTTT TTTAACCTTTTGTTATATCTTAATCTTCAAACTTTTTGGCTTAACTATTATTTTGGTTCTATAGTTTTACATGATCTTTT TCTCTATTGTTTCAATTGCTCTAATTAAGCAAAAGTTAACTAATTTACGTAACAGTTTCTAATTTTTTCTTTTTTGAACT GATTTACTGATTAACTTTTTTTTGACTGTCATGTTTAGACACATTATGTCACTTTTTATGTAAAAAATTGTGATATATTT CAATTTTTTCTGTCAGTTATTGAATGACAACTTAGCATATGTACCAAATTTGTTCAATTTTAAAAGGATATGGACTTAAT TGGAAAAATTGAAACTATAATAATCAAAACCACGCATTCACAAAACTATAACGATGAAAATTGTAAGTAAGCCCTTTTAT ATAGGTGATGTTGAAAAACAGTGCAAACTTGTCTTTCCAAAAAGTTGATAGGAAGAGTTAACTAGGCATAGGCTTTCTTG AGTGAATCAGATTATATATACATATATTGTTACTATATTAATATGTATCTTCATGACAAAGTTTTAACCTAAACATATAG AGACCCTCAACTGGTGAAGAAGATTGGAGAAGCAACTGCACTTGAAGTTAGAGCAACAGGAATTCAATATGCTTTTGCTC CTTGCATAGCGGTAATTGAGAAATGCCCATTATGCGTTTTTCTTGAGTGTCTTGTTATTGATAAGTCTCACATTCACTAG AAATATGGCTAACTAAGTATTTAAAAAGGGTAGAGAAACGCTCGTTCCGAAATTCGCTTTTAGATTAGAGTTAAGTCTGA CTCAAATTCTAATACTTACTTGATAAACATATCTCTGTTTTTATAGGTTTGCCGAGATCCTAGGTGGGGCCGATGCTATG AAAGTTATAGTGAAGATCATACAATAGTTCAAGCTATGACTGAGCTCATTCCAGGACTGCAAGGTGACATCCCAGCAAAC TCACCAAAGGGAGTTCCATTTGTTGCTGGAAAGTAAGAATTCATGTCTTGCAGTAGGTAGTTTAGTTTCATATGCTTGTT TTCTCCCTGAGAAGTGATTGGTGGCTTGAATTTTTTAGCCACAAATATGACATGACAAATTTTTGAATTAACCAATCACA GCTAAAGTCATTAATGGGGTCCAGAAATAAAAACAACAATGATATAAAATCAACCAATAAACATCACCAAGGCACAGAGA TGATTTTTCGTCTCGTGCTATCACGCATTTTCCTTTCTGCCTAACGACTTATGGTTGAGAAGTTTCATATTGACTAACGA TATGGCCAATATAGTCCTTATAAAGGGTAGAGCAAGCATCACCTCTAACCTAGCTTTTGGGGTAGAATAAGACTTAACCC AAATTAAGATGGTATCATAGCCTATCCTATACCGATTTATCGAAAACCACCAATACTTGTTTTATTCTTCATAGGTCATA TCAAATGTTGTCTGTCATTGCTTTTCATGTTGATTATTTTGTTAATTTTAGATCTTTCTTCTTCAATTCTTAACTTTTCC TTTATATTTTTGACAATGATGGAATTTGTCTCAGCGTTAGCGTTTGATGTGCTGGGATTTTTTTTTTCACAGGAATAAAG TTGCAGCTTGTGCTAAGCACTATGTTGGTGATGGTGGAACAACAAAAGGAATAAATGAGAACAACACAGTGATAGACAGA CATGGGTTGCTCAGCATTCACATGCCAGCATACTATAAGTCAATCATTAAGGGTGTGGCAACCATCATGGTCTCTTACTC CAGCTGGAACGGAGAAAAAATGCACGCTAATCGTGATCTAGTCACCGGCTTTCTAAAGAACAAACTTCGTTTTAGGGTAA CAATTTACCTCCTCTACTTTTGAATTAGGCTTGTGGAAGCCAACGTAAAATTGACCGACCTCAATCAAAAGAATAAGGCC TTAGTTACGTGTTATGTGTAATCACAACATTGATTTCGGCCTAAAGGTCTTTGTTTATGAATCATCACATTAATAGAGTC CTAAGAAATGTATCTGTTTGTTTCAGGGTTTTGTCATATCAGATTGGCAGGGAATTGACAGGATAACTTACCCTCCTCAT GCAAACTATACATATTCCATTCAAGCCGGAGTCAGTGCTGGTATTGACATGGTAAGCTAAGACCCCTTTTGGATACCGAC CAAAAAGCAATTATTGGAGCTTATTTATTGTTTTTCAAGAAAACAACAATAAGTGGTGCTCTTTAGTCTTCAACCAAACA AGGTCCAAGAGTTTCATGTTTGTTGCCTATGCATAGCCTTATTTGATTTTTAACAATGCATATATCATTTTTTACTCTTA AATTGATTTCATAATGCTGCAGGTAATGATTCCCTATAACTTCACAGAACTCATTGATGGCCTAACCATGCTGGTGAAAA ATAATTTCATACCAATGAGTCGAATTGATGATGCAGTTAAGAGAATTTTGAGGGTCAAGTTTGTTATGGGTCTATTTGAG AATCCATTGGCTGATTATAGTCTAGTGAGCCAGCTTGGGAGCCAGGTAATTAAACAATCACTTGGTCATGTATAAATATG TTGCTTCATATATTCATTTATACCCAGGGGTCATCTATAATTTGACAGGAGCATAGAGATTTGGCTAGGGAAGCTGTGAG AAGATCATTAGTCTTATTAAAGAATGGAGAAAGTGTTGATGAACCATTGCTCCCTCTTCCTAAAAGGGCTTCAAAAATAC TTGTTGCTGGAACCCATGCTAATAATCTAGGCTATCAATGTGGTGGATGGACCATTGAATGGCAAGGACTCAGTGGCAAC AACCTTACTAGTGGTAATACTATACATTCCGTCTAAACTTTGTGTGTGTACATGTTTGGTTTCTTGTTAGGAAATCCTAT AATCAATTCTGGTAGAGTAAAAATAAATTCAGGAAGAAAATATTAATATTTAGGAGTATTTTGGAGAATTTATTTCAAAC TCAAAATAATTGTGATAGAAGCTAGAGAGTGTAGATTTTGCATTGAACATAAATTTTACAACTGAATTGCATAACATTAC ACAACAAAAATCACTTATTCACTTTGAACTTACTTTTACTATAACCAATTTTAACAAAATCAATTATGACAAATGCTTAT CCGAACACGTGGAGTAAATTTTGTGAGTAGCTTATGAGTTTCAGAATTGATTCTAGTGAATATGAAGCTCATCCATACAT GCTATATTTTCCTTACCTTGTTGCACTGAGAATACAATGCTGACACTTATGGCTTATCTGATGTACAGGTACCACAATTC TGAGTGCTATCACAAGCACAGTTGAGGAAGATACAGAGATAGTCTACAAGGAGAACCCTGATCTAAACTATGTGAAGTCC AATAACTTTTCATATGCTATTGTGGTAGTTGGAGAAACTCCATATGCTGAAACCAATGGTGATAGCTTGAATTTGACCCT CTCTAATCCTGGTTCTGAGATCATAAACAATGTTTGTGGAGGAGTGAAGTGTGTTGTTGTGCTTATCACTGGTCGCCCTG TGGTTATGCAGCCATATCTTGATGCAATTGATGCCCTTGTTGCTGCTTGGCTCCCTGGTAGTGAAGGTCAAGGTGTGAGT GATGTGTTATTTGGTGACTATGGGTTCAGTGGAAAGCTCCCAAGGACATGGTTCAAGAGTGTTGATCAGTTGCCTATGAA TGTTGGAGATCCTCATTATGACCCATTATTCCCATTTGGATTTGGCCTAACAACCAAACCCAACAAAGCCAATTAA
CDS sequence (LotjaGi2g1v0098600.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCAAAGTTGTCATCTTTTTTGTGGGGCTTGTGCTCTTGCACTGTTGGGTAGCCATGGCAGAGGCAGAGTATTTGAA ATACAAAGATCCAAAACAGCCTCTGAGTACACGAATCAAGGACCTTATTAACAGGATGACTTTAGAAGAGAAAATTGGCC AGATGGTGCAGATTGATCGCAGTGTTGCTTCTGCTGATGTGATGAAGAAGTATTTTATTGGGAGTATGCTAAGTGGGGGT GGCAGTGTTCCCAAGCAACATGCTTCTGCAGAGGATTGGGTTGACATGGTGAATGATTTTCAAAAGGGTGCTTTATCTAC TAGGTTGGGAATTCCAATGATATATGGGATTGATGCTGTTCATGGCCATAACAATGTCTATAGAGCAACCATTTTTCCTC ACAATGTTGGTCTAGGAGCTACCAGAGACCCTCAACTGGTGAAGAAGATTGGAGAAGCAACTGCACTTGAAGTTAGAGCA ACAGGAATTCAATATGCTTTTGCTCCTTGCATAGCGGTTTGCCGAGATCCTAGGTGGGGCCGATGCTATGAAAGTTATAG TGAAGATCATACAATAGTTCAAGCTATGACTGAGCTCATTCCAGGACTGCAAGGTGACATCCCAGCAAACTCACCAAAGG GAGTTCCATTTGTTGCTGGAAAGAATAAAGTTGCAGCTTGTGCTAAGCACTATGTTGGTGATGGTGGAACAACAAAAGGA ATAAATGAGAACAACACAGTGATAGACAGACATGGGTTGCTCAGCATTCACATGCCAGCATACTATAAGTCAATCATTAA GGGTGTGGCAACCATCATGGTCTCTTACTCCAATTGGCAGGGAATTGACAGGATAACTTACCCTCCTCATGCAAACTATA CATATTCCATTCAAGCCGGAGTCAGTGCTGGTATTGACATGGTAATGATTCCCTATAACTTCACAGAACTCATTGATGGC CTAACCATGCTGGTGAAAAATAATTTCATACCAATGAGTCGAATTGATGATGCAGTTAAGAGAATTTTGAGGGTCAAGTT TGTTATGGGTCTATTTGAGAATCCATTGGCTGATTATAGTCTAGTGAGCCAGCTTGGGAGCCAGGAGCATAGAGATTTGG CTAGGGAAGCTGTGAGAAGATCATTAGTCTTATTAAAGAATGGAGAAAGTGTTGATGAACCATTGCTCCCTCTTCCTAAA AGGGCTTCAAAAATACTTGTTGCTGGAACCCATGCTAATAATCTAGGCTATCAATGTGGTGGATGGACCATTGAATGGCA AGGACTCAGTGGCAACAACCTTACTAGTGGTACCACAATTCTGAGTGCTATCACAAGCACAGTTGAGGAAGATACAGAGA TAGTCTACAAGGAGAACCCTGATCTAAACTATGTGAAGTCCAATAACTTTTCATATGCTATTGTGGTAGTTGGAGAAACT CCATATGCTGAAACCAATGGTGATAGCTTGAATTTGACCCTCTCTAATCCTGGTTCTGAGATCATAAACAATGTTTGTGG AGGAGTGAAGTGTGTTGTTGTGCTTATCACTGGTCGCCCTGTGGTTATGCAGCCATATCTTGATGCAATTGATGCCCTTG TTGCTGCTTGGCTCCCTGGTAGTGAAGGTCAAGGTGTGAGTGATGTGTTATTTGGTGACTATGGGTTCAGTGGAAAGCTC CCAAGGACATGGTTCAAGAGTGTTGATCAGTTGCCTATGAATGTTGGAGATCCTCATTATGACCCATTATTCCCATTTGG ATTTGGCCTAACAACCAAACCCAACAAAGCCAATTAA
Protein sequence (LotjaGi2g1v0098600.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKVVIFFVGLVLLHCWVAMAEAEYLKYKDPKQPLSTRIKDLINRMTLEEKIGQMVQIDRSVASADVMKKYFIGSMLSGG GSVPKQHASAEDWVDMVNDFQKGALSTRLGIPMIYGIDAVHGHNNVYRATIFPHNVGLGATRDPQLVKKIGEATALEVRA TGIQYAFAPCIAVCRDPRWGRCYESYSEDHTIVQAMTELIPGLQGDIPANSPKGVPFVAGKNKVAACAKHYVGDGGTTKG INENNTVIDRHGLLSIHMPAYYKSIIKGVATIMVSYSNWQGIDRITYPPHANYTYSIQAGVSAGIDMVMIPYNFTELIDG LTMLVKNNFIPMSRIDDAVKRILRVKFVMGLFENPLADYSLVSQLGSQEHRDLAREAVRRSLVLLKNGESVDEPLLPLPK RASKILVAGTHANNLGYQCGGWTIEWQGLSGNNLTSGTTILSAITSTVEEDTEIVYKENPDLNYVKSNNFSYAIVVVGET PYAETNGDSLNLTLSNPGSEIINNVCGGVKCVVVLITGRPVVMQPYLDAIDALVAAWLPGSEGQGVSDVLFGDYGFSGKL PRTWFKSVDQLPMNVGDPHYDPLFPFGFGLTTKPNKAN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 21 | 21 | - | – | |
| Phobius | 4 | 14 | 11 | - | – | |
| PANTHER | 4 | 281 | 278 | 0.0 | – | |
| PANTHER | 4 | 281 | 278 | 0.0 | – | |
| Phobius | 15 | 23 | 9 | - | – | |
| Gene3D | 21 | 280 | 260 | 1.2E-105 | ||
| Phobius | 24 | 598 | 575 | - | – | |
| SUPERFAMILY | 26 | 381 | 356 | 3.37E-105 | ||
| Pfam | 47 | 282 | 236 | 1.6E-44 | ||
| PRINTS | 108 | 124 | 17 | 7.4E-18 | ||
| PRINTS | 132 | 151 | 20 | 7.4E-18 | ||
| PRINTS | 178 | 194 | 17 | 7.4E-18 | ||
| PRINTS | 224 | 240 | 17 | 7.4E-18 | ||
| PANTHER | 277 | 597 | 321 | 0.0 | – | |
| PANTHER | 277 | 597 | 321 | 0.0 | – | |
| Gene3D | 281 | 366 | 86 | 8.6E-23 | ||
| Pfam | 296 | 345 | 50 | 4.9E-6 | ||
| Gene3D | 367 | 595 | 229 | 5.0E-90 | ||
| SUPERFAMILY | 382 | 591 | 210 | 1.57E-60 | ||
| Pfam | 382 | 591 | 210 | 1.3E-36 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi2g1v0098600.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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