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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0109800 |
| Transcript ID | LotjaGi2g1v0109800.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; TAIR: AT5G17920.1 Cobalamin-independent synthase family protein; Swiss-Prot: sp|O50008|METE1_ARATH 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1; TrEMBL-Plants: tr|A0A151RFH6|A0A151RFH6_CAJCA 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Found in the gene: LotjaGi2g1v0109800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:38447466..38452647) extracted from Lotus japonicus Gifu genome v1.2.
ACATATCGGGAGTCATGGTGTATGGGACGTGTGTAATCTGTGTAGGAATGATTAAAAATGGTTTCAAACATATTGAATTG AGCTTTGTTTGCAATTTGATCTGATGTGGCAGAATAATGGCATCCCATATTGTTGGATACCCTCGTATGGGCCCTAAGAG AGAGCTCAAGTTCGCCCTGGAGTCATTCTGGGATGGGAAGAGCAGTGCTGAGGATTTGAAGAAGGTGGCAGCTGGTCTCA GGGCATCCATCTGGAAGCAGATGGCTGATGCCGGGATCAAGTACATCCCCAGCAACACATTCTCCTACTACGATCAGGTG CTTGATGCCACCGCAATGCTCGGCGCTGTTCCACCCCGATACGGGTGGACTGGCGGGGAGATTGGATTTGATACTTACTT CTCCATGGCTAGGGGTAATGCCTCTGTGCCTGCAATGGAGATGACCAAGTGGTTTGATACCAACTAGTAAGTGATGATGG CTAATGTTTTGTTGTATTGGTTGTTACTTGTTTGTTTTTAATAAAAGTCCTAATGATCTGATTATTGAAACTGCTGTATG TGTGCACTTATCCAGCCACTTTATTGTCCCTGAACTGGGACCTGATGTGAATTTCACTTATGCATCCCACAAGGCAGTGG ATGAGTACAAGGAGGCCAAGGCGGTAAGCATTTATAACCATTTACATTAACTGCTTATTCCATAGAATTTTGCACACATT ACATTAGGCTGCGAGCTGAGTCGACTTAAGGTGTGACTGTGAGAAGCATTAGATTGTTCTGGTTGTTGTAATTTGTGTGG GTCATTATGATATTTTCTCGTGTTTATCTATATTTACATTGTCATTGAATGTTTAGTTTCTCTTCCAGCTTGGAGTAGAT ACAATCCCAGTCCTCATTGGCCCTGTATCATACTTGGTGCTCTCCAAACCTGCCAAGGGCGCTGATAAATCCTTCTCTCT TCTTTCCCTCCTCCCAAAAGTCATTGCTGTCTACAAGTAAGAATTTAAGTAATGAACATCTCTAAATTATTCGTGCTTAA TATTTGTGTTACTTCTCTAACCTGCTTGTAACTATTATTAACTCAGAGAAGTTGTGGCTGATCTTAAGGCAGCTGGTGCT ACATGGATTCAGTTTGATGAACCTACCCTTGTCTTGGACCTTGACCCTCACACATTGCAAGCATTTACTGCAACATACTC AGAACTTGAATCTACTTTATCTGGTCTAAATGTTCTTATTGAGACCTACTTTGCTGATGTTCCTGCTGAGGCATACAAGA CCCTCACTACTCTGAATGGCATCACAGCGTTTGGATTTGATTTAGTCCGTGGAGCTAAGACTCTTGATTTGATCAAGGGA GGATTTCCCAGTGGAAAGCATCTGTTTGCTGGAGTGGTTGATGGAAGGAACATTTGGGCTAATGATCTTGCTGCTTCTCT CAGTACATTAACTAGTCTTGAGGGCATTGTGGGCAAAGGTATTTGTCAAACATGCATTACCTGTTAGACTCTGCAGTTAA TATAGTCATTTGATATATCTATTCACTAAATTGTTTGCAGATAACCTTGTTGTGTCCACCTCCTGCTCACTTCTTCACAC TGCTGTTGATCTTGTTAATGAAACCAAGTTGGACAATGAGATAAAATCATGGCTGGCTTTTGCTGCCCAAAAAATTGTTG AAGTAAATGCATTGGCCAAAGCATTGTCTGGTCAAAAGGATGAGGTAAGTGATAGAAACCAAACCAGACCTATGTGTATT AATGATAAACCCTAATCCCCAAATTGGGAACTAAGGGAAGATACAAGAGAGAAGGGATACCAAACACCCTTCAAACCCAG AAAGAGACCACTCTCTCTAGAACCCAAAACCAAATGATTAACCAGATGATTAATGTTCTCTCACCCCATCTTATTATAGG CAAAAAGCCTTACTAACAACCCTCTTAACTAACTATCTAATTATATGATAACTCCCTCACTTAACTAACTAAACCATGTT TACCTATCAATACTCCCCTCCGTCATCCTCACTGCCTCTGCGTCAACTCGTTCTTCCTCTTCCGCTTCAAGATTGGGCTT TCGCAACGCCTCCGCTTCTACTCGCTCTTCCTCCGCCGTCGTCTCCGTTTCACCCTTTGCTCCAAGATTGGGTTTTCGAA TTGTCGTCGCCGCCGCTAAATCTATCTCCGACTTAGCCTCCGAATTCTCCCGCCACTCCTCTGCCACTGCTTGCTTTGCC TCTGCTGCAATTTCCGATACCCTCTGCAACGCTTCCACTGCCCTTCTTTCTTGTTCTCTCTTCTGTCTCACTTCTTCAAG TTCTCACAACCGATTTTCTAATCTTGAGATTTCTTTCTCAAGTTCAGGGTTTGCAACGAATAGCACCCCCAATTTCCTCG CAACTGCTGCAAGAAATAACTCGTTCTTCGCTTTCATGGCTTCAAGCGACTCCATTCTCGCCATGCTCCTTGTCTCTTCC ATAACGCAGCAAGGAATTTGTAGTTCAGGCACTAGATCGGTGCTCTGATACCAATGATAGAAACCAAACCCGAACTCTGT GTATTATTGATAAGCCGTAATCCCCATATTGGGAACTAAGGGGATACAAGAGAGAAGGGATACCAAACACCCTTCAAACC CAGAAAGAGACCACTCTCCCTCTAGAACCCAAAACCAAATGATTAACTAGATGATTAATGTTCTCTAAGCCCCTCCTATT TATAGGCAACAAGCCTTACTAACCCTCTTAACTAACTATCTAATTATATGATAACTCCCTCACTTAACTATCTAAACCAT GTGTACCTATCAGTAAGACCCATTCCTTTTTGTTTATCTCAAGTCTCGAGTTATATAGATGATGTTTGTAACTTGATATT TTTAATTGTTTTTTGAAATAGTAAGAAGACTTAATTGTTTTTTGACATAGATATATTTTAATTGTTGAGCTTCTTACTAT ACTGTTATAGTAAGAAGTTTTAATTTTTTTTTTGAAATAGATATTTTTTTTATAAATATATATGTAATCTATGGAACCAT CATGTTTTTTAAATATTTATGATAAGAATTGAAAGAGAAATTGTAGAATAAAAAGATCAAAACAATGATAAAGTGAATAA AGAGAAAAAAATGTCAATCACTAAATTAAAATTGAAATAATTAAGGAAAAGTATAATGTCATAATATTAATAACCAGTAT GATAAAACTAGCAGGCTATTTTGTTAGCAATTTAGCAGTGGCTGGCAATATATGCAGTCTTTTTTGTGTGTGTTTATGTT GTTACATAATTCACTGAATAATTTTTTTGTGATTTCATTTCCAGGCGTTCTTCTCTTCCAATGCTGCAGCTCAGGCTTCA AGAAAGTCCTCTCCTAGAGTGACCAATGAGGCTGTTCAGAAGGCTGTGAGTTTCTTATTTTTGTGGTGTCTGATCCGCTG TTCGTTTTTTTTGAACTGAATTTGTTGTGAAATTGATTCTCTTATTACTTATGACATCTTTTCTTACCCTTACAGGCTGC TGCACTGAAGGGCTCTGATCATCGCCGTGCAACAAATGTCGGCGCCAGACTGGATGCTCAGCAAAAGAAGCTCAACCTTC CAGTTCTCCCAACGACCACAATTGGATCCTTCCCTCAGACTGTTGAACTGAGGAGGGTGCGCCGTGAATACAAGGCTAAC AAGTAAGATATTCTGAGAGCTGATAACAGGCTTGTTTTCATGAACATTTGCTTTTTTTTTATTGATTCTGATCTTGTTGT TTTCAGGATCACGGAGGAAGAGTATGTTACTTCTATTAAAGAGGAGATCCGCAAAGTTGTTGAACTCCAAGAACAGCTTG ATATTGATGTCCTGGTACATGGCGAGCCTGAGGTCAGCTTTCATCTTCACATAAGAACTAAAAGATTAATATGCTGTAGC AGAGAATAAGAGAGTGCTGTTACCCTGTTATTTTGATAGATCATATATCTTCACTTCTTTCTTACTGATCTGAAAAATAA AAATTTCCTACCAGATTTTCTTCTCATTGTGATGTTGTGAACTCCCAATTCCGTTTCCCTCTAATTGTTTTGGTGTTTTA TTGCAGAGAAATGATATGGTTGAGTACTTTGGTGAGCAGTTATCTGGTTTTGCCTTTACTGTCAATGGGTGGGTGCAATC TTACGGATCTCGTTGTGTGAAGCCACCAATCATCTATGGTGATGTGAGTCGCCCAAAACCAATGACAGTATTCTGGTCAT CTATGGCTCAGAGTATGACGAAACGCCCAATGAAAGGAATGCTTACCGGCCCAGTAACCATTCTCAACTGGTCCTTTGTT AGAAATGATCAACCTAGGTAAAATCTAAAGACCCATTGTAATTTGAAAGGAAATGAATAAAAGTTAAAGTGAGCTTAGAA GAGAAATAAACTAGTATTCAGCAATCACCATATTGTTATTTCTAAGATGGTGTGAGGCCGATTTTGCAGATCTGAGACTA CCTACCAGATTGCTTTGGCTATCAAGGATGAAGTAGAAGATCTTGAAAAAGGTGGTATTGGTGTTATCCAAATCGACGAG GCTGCTTTGAGAGAGGGGCTTCCATTGAGGAAGTCAGAGCAAGCTCACTACTTGGACTGGGCTGTCCATGCCTTCAGAAT TACCAATATTGGAGTGCAGGATACTACTCAGGTACTTTTGAATTACAAACCATTGGGTTAGAATAATTTGTTTCCCTTCT ATTGTATAATAAAATGAAACTCATGATAAAAGTCATCAAAATTTTATCTACACATAATTAGCTTATGTATTTTGTGTTAA TAACAATTGCCAGATCCACACCCACATGTGCTACTCTAACTTCAATGACATCATCCACTCTATCATCGATATGGATGCTG ATGTGATCACCATTGAGAACTCACGTTCGGATGAGAAGCTTCTGTCGGTGTTCCGTGAAGGAGTTAAGTACGGAGCTGGA ATTGGCCCTGGAGTCTATGATATTCACTCCCCCAGAATACCACCAACTGAAGAAATCGCAGACAGGATCAACAAGATGCT TGCAGTGCTTGAGACAAACATTTTGTGGGTAAACCCTGATTGTGGGCTCAAGACTCGCAAGTACACGGAGGTGAATCCAG CCCTCACAAACATGGTTGCTGCCACAAAGCTGATCCGCAACCAGCTTGCAAGTGGCAAGTGA
CDS sequence (LotjaGi2g1v0109800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATCCCATATTGTTGGATACCCTCGTATGGGCCCTAAGAGAGAGCTCAAGTTCGCCCTGGAGTCATTCTGGGATGG GAAGAGCAGTGCTGAGGATTTGAAGAAGGTGGCAGCTGGTCTCAGGGCATCCATCTGGAAGCAGATGGCTGATGCCGGGA TCAAGTACATCCCCAGCAACACATTCTCCTACTACGATCAGGTGCTTGATGCCACCGCAATGCTCGGCGCTGTTCCACCC CGATACGGGTGGACTGGCGGGGAGATTGGATTTGATACTTACTTCTCCATGGCTAGGGGTAATGCCTCTGTGCCTGCAAT GGAGATGACCAAGTGGTTTGATACCAACTACCACTTTATTGTCCCTGAACTGGGACCTGATGTGAATTTCACTTATGCAT CCCACAAGGCAGTGGATGAGTACAAGGAGGCCAAGGCGCTTGGAGTAGATACAATCCCAGTCCTCATTGGCCCTGTATCA TACTTGGTGCTCTCCAAACCTGCCAAGGGCGCTGATAAATCCTTCTCTCTTCTTTCCCTCCTCCCAAAAGTCATTGCTGT CTACAAAGAAGTTGTGGCTGATCTTAAGGCAGCTGGTGCTACATGGATTCAGTTTGATGAACCTACCCTTGTCTTGGACC TTGACCCTCACACATTGCAAGCATTTACTGCAACATACTCAGAACTTGAATCTACTTTATCTGGTCTAAATGTTCTTATT GAGACCTACTTTGCTGATGTTCCTGCTGAGGCATACAAGACCCTCACTACTCTGAATGGCATCACAGCGTTTGGATTTGA TTTAGTCCGTGGAGCTAAGACTCTTGATTTGATCAAGGGAGGATTTCCCAGTGGAAAGCATCTGTTTGCTGGAGTGGTTG ATGGAAGGAACATTTGGGCTAATGATCTTGCTGCTTCTCTCAGTACATTAACTAGTCTTGAGGGCATTGTGGGCAAAGAT AACCTTGTTGTGTCCACCTCCTGCTCACTTCTTCACACTGCTGTTGATCTTGTTAATGAAACCAAGTTGGACAATGAGAT AAAATCATGGCTGGCTTTTGCTGCCCAAAAAATTGTTGAAGTAAATGCATTGGCCAAAGCATTGTCTGGTCAAAAGGATG AGGCGTTCTTCTCTTCCAATGCTGCAGCTCAGGCTTCAAGAAAGTCCTCTCCTAGAGTGACCAATGAGGCTGTTCAGAAG GCTGCTGCTGCACTGAAGGGCTCTGATCATCGCCGTGCAACAAATGTCGGCGCCAGACTGGATGCTCAGCAAAAGAAGCT CAACCTTCCAGTTCTCCCAACGACCACAATTGGATCCTTCCCTCAGACTGTTGAACTGAGGAGGGTGCGCCGTGAATACA AGGCTAACAAGATCACGGAGGAAGAGTATGTTACTTCTATTAAAGAGGAGATCCGCAAAGTTGTTGAACTCCAAGAACAG CTTGATATTGATGTCCTGGTACATGGCGAGCCTGAGAGAAATGATATGGTTGAGTACTTTGGTGAGCAGTTATCTGGTTT TGCCTTTACTGTCAATGGGTGGGTGCAATCTTACGGATCTCGTTGTGTGAAGCCACCAATCATCTATGGTGATGTGAGTC GCCCAAAACCAATGACAGTATTCTGGTCATCTATGGCTCAGAGTATGACGAAACGCCCAATGAAAGGAATGCTTACCGGC CCAGTAACCATTCTCAACTGGTCCTTTGTTAGAAATGATCAACCTAGATCTGAGACTACCTACCAGATTGCTTTGGCTAT CAAGGATGAAGTAGAAGATCTTGAAAAAGGTGGTATTGGTGTTATCCAAATCGACGAGGCTGCTTTGAGAGAGGGGCTTC CATTGAGGAAGTCAGAGCAAGCTCACTACTTGGACTGGGCTGTCCATGCCTTCAGAATTACCAATATTGGAGTGCAGGAT ACTACTCAGATCCACACCCACATGTGCTACTCTAACTTCAATGACATCATCCACTCTATCATCGATATGGATGCTGATGT GATCACCATTGAGAACTCACGTTCGGATGAGAAGCTTCTGTCGGTGTTCCGTGAAGGAGTTAAGTACGGAGCTGGAATTG GCCCTGGAGTCTATGATATTCACTCCCCCAGAATACCACCAACTGAAGAAATCGCAGACAGGATCAACAAGATGCTTGCA GTGCTTGAGACAAACATTTTGTGGGTAAACCCTGATTGTGGGCTCAAGACTCGCAAGTACACGGAGGTGAATCCAGCCCT CACAAACATGGTTGCTGCCACAAAGCTGATCCGCAACCAGCTTGCAAGTGGCAAGTGA
Protein sequence (LotjaGi2g1v0109800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLKKVAAGLRASIWKQMADAGIKYIPSNTFSYYDQVLDATAMLGAVPP RYGWTGGEIGFDTYFSMARGNASVPAMEMTKWFDTNYHFIVPELGPDVNFTYASHKAVDEYKEAKALGVDTIPVLIGPVS YLVLSKPAKGADKSFSLLSLLPKVIAVYKEVVADLKAAGATWIQFDEPTLVLDLDPHTLQAFTATYSELESTLSGLNVLI ETYFADVPAEAYKTLTTLNGITAFGFDLVRGAKTLDLIKGGFPSGKHLFAGVVDGRNIWANDLAASLSTLTSLEGIVGKD NLVVSTSCSLLHTAVDLVNETKLDNEIKSWLAFAAQKIVEVNALAKALSGQKDEAFFSSNAAAQASRKSSPRVTNEAVQK AAAALKGSDHRRATNVGARLDAQQKKLNLPVLPTTTIGSFPQTVELRRVRREYKANKITEEEYVTSIKEEIRKVVELQEQ LDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSSMAQSMTKRPMKGMLTG PVTILNWSFVRNDQPRSETTYQIALAIKDEVEDLEKGGIGVIQIDEAALREGLPLRKSEQAHYLDWAVHAFRITNIGVQD TTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLA VLETNILWVNPDCGLKTRKYTEVNPALTNMVAATKLIRNQLASGK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 765 | 765 | 0.0 | ||
| PANTHER | 1 | 765 | 765 | 0.0 | – | |
| PANTHER | 1 | 765 | 765 | 0.0 | – | |
| Hamap | 1 | 760 | 760 | 34.446 | ||
| CDD | 3 | 367 | 365 | 0.0 | – | |
| SUPERFAMILY | 3 | 395 | 393 | 5.76E-113 | ||
| Pfam | 3 | 315 | 313 | 6.0E-117 | ||
| Gene3D | 5 | 525 | 521 | 0.0 | ||
| TIGRFAM | 6 | 760 | 755 | 0.0 | ||
| Gene3D | 390 | 753 | 364 | 0.0 | ||
| SUPERFAMILY | 397 | 760 | 364 | 3.01E-111 | ||
| Pfam | 432 | 755 | 324 | 2.1E-156 | ||
| CDD | 433 | 756 | 324 | 4.04641E-148 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity | Catalysis of the reaction: 5-methyltetrahydropteroyltri-L-glutamate + L-homocysteine = L-methionine + tetrahydropteroyltri-L-glutamate. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. | ||
| Biological process | Cellular amino acid biosynthetic process | The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents. | ||
| Biological process | Methionine biosynthetic process | The chemical reactions and pathways resulting in the formation of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins. |
Expression pattern of LotjaGi2g1v0109800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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