Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0109800 |
| Transcript ID | LotjaGi2g1v0109800.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; TAIR: AT5G17920.1 Cobalamin-independent synthase family protein; Swiss-Prot: sp|O50008|METE1_ARATH 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1; TrEMBL-Plants: tr|A0A151RFH6|A0A151RFH6_CAJCA 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Found in the gene: LotjaGi2g1v0109800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:38447466..38452830) extracted from Lotus japonicus Gifu genome v1.2.
TGTGATCCTGTTGTTTAGAGTTCAGTATTGTCTTAATTTTTGTTTATGGAAAAATTTGTATTTTAAGATAAAAGAGGTGG ACCTGTTCATTGTCATTCTTAACTCCGAAAGGGTATTGCGCAGTTAATACATTATAATAAGTAAACCATTAGTTACAATG GATAATTGATACCTGTTTCTTTGACATATCGGGAGTCATGGTGTATGGGACGTGTGTAATCTGTGTAGGAATGATTAAAA ATGGTTTCAAACATATTGAATTGAGCTTTGTTTGCAATTTGATCTGATGTGGCAGAATAATGGCATCCCATATTGTTGGA TACCCTCGTATGGGCCCTAAGAGAGAGCTCAAGTTCGCCCTGGAGTCATTCTGGGATGGGAAGAGCAGTGCTGAGGATTT GAAGAAGGTGGCAGCTGGTCTCAGGGCATCCATCTGGAAGCAGATGGCTGATGCCGGGATCAAGTACATCCCCAGCAACA CATTCTCCTACTACGATCAGGTGCTTGATGCCACCGCAATGCTCGGCGCTGTTCCACCCCGATACGGGTGGACTGGCGGG GAGATTGGATTTGATACTTACTTCTCCATGGCTAGGGGTAATGCCTCTGTGCCTGCAATGGAGATGACCAAGTGGTTTGA TACCAACTAGTAAGTGATGATGGCTAATGTTTTGTTGTATTGGTTGTTACTTGTTTGTTTTTAATAAAAGTCCTAATGAT CTGATTATTGAAACTGCTGTATGTGTGCACTTATCCAGCCACTTTATTGTCCCTGAACTGGGACCTGATGTGAATTTCAC TTATGCATCCCACAAGGCAGTGGATGAGTACAAGGAGGCCAAGGCGGTAAGCATTTATAACCATTTACATTAACTGCTTA TTCCATAGAATTTTGCACACATTACATTAGGCTGCGAGCTGAGTCGACTTAAGGTGTGACTGTGAGAAGCATTAGATTGT TCTGGTTGTTGTAATTTGTGTGGGTCATTATGATATTTTCTCGTGTTTATCTATATTTACATTGTCATTGAATGTTTAGT TTCTCTTCCAGCTTGGAGTAGATACAATCCCAGTCCTCATTGGCCCTGTATCATACTTGGTGCTCTCCAAACCTGCCAAG GGCGCTGATAAATCCTTCTCTCTTCTTTCCCTCCTCCCAAAAGTCATTGCTGTCTACAAGTAAGAATTTAAGTAATGAAC ATCTCTAAATTATTCGTGCTTAATATTTGTGTTACTTCTCTAACCTGCTTGTAACTATTATTAACTCAGAGAAGTTGTGG CTGATCTTAAGGCAGCTGGTGCTACATGGATTCAGTTTGATGAACCTACCCTTGTCTTGGACCTTGACCCTCACACATTG CAAGCATTTACTGCAACATACTCAGAACTTGAATCTACTTTATCTGGTCTAAATGTTCTTATTGAGACCTACTTTGCTGA TGTTCCTGCTGAGGCATACAAGACCCTCACTACTCTGAATGGCATCACAGCGTTTGGATTTGATTTAGTCCGTGGAGCTA AGACTCTTGATTTGATCAAGGGAGGATTTCCCAGTGGAAAGCATCTGTTTGCTGGAGTGGTTGATGGAAGGAACATTTGG GCTAATGATCTTGCTGCTTCTCTCAGTACATTAACTAGTCTTGAGGGCATTGTGGGCAAAGGTATTTGTCAAACATGCAT TACCTGTTAGACTCTGCAGTTAATATAGTCATTTGATATATCTATTCACTAAATTGTTTGCAGATAACCTTGTTGTGTCC ACCTCCTGCTCACTTCTTCACACTGCTGTTGATCTTGTTAATGAAACCAAGTTGGACAATGAGATAAAATCATGGCTGGC TTTTGCTGCCCAAAAAATTGTTGAAGTAAATGCATTGGCCAAAGCATTGTCTGGTCAAAAGGATGAGGTAAGTGATAGAA ACCAAACCAGACCTATGTGTATTAATGATAAACCCTAATCCCCAAATTGGGAACTAAGGGAAGATACAAGAGAGAAGGGA TACCAAACACCCTTCAAACCCAGAAAGAGACCACTCTCTCTAGAACCCAAAACCAAATGATTAACCAGATGATTAATGTT CTCTCACCCCATCTTATTATAGGCAAAAAGCCTTACTAACAACCCTCTTAACTAACTATCTAATTATATGATAACTCCCT CACTTAACTAACTAAACCATGTTTACCTATCAATACTCCCCTCCGTCATCCTCACTGCCTCTGCGTCAACTCGTTCTTCC TCTTCCGCTTCAAGATTGGGCTTTCGCAACGCCTCCGCTTCTACTCGCTCTTCCTCCGCCGTCGTCTCCGTTTCACCCTT TGCTCCAAGATTGGGTTTTCGAATTGTCGTCGCCGCCGCTAAATCTATCTCCGACTTAGCCTCCGAATTCTCCCGCCACT CCTCTGCCACTGCTTGCTTTGCCTCTGCTGCAATTTCCGATACCCTCTGCAACGCTTCCACTGCCCTTCTTTCTTGTTCT CTCTTCTGTCTCACTTCTTCAAGTTCTCACAACCGATTTTCTAATCTTGAGATTTCTTTCTCAAGTTCAGGGTTTGCAAC GAATAGCACCCCCAATTTCCTCGCAACTGCTGCAAGAAATAACTCGTTCTTCGCTTTCATGGCTTCAAGCGACTCCATTC TCGCCATGCTCCTTGTCTCTTCCATAACGCAGCAAGGAATTTGTAGTTCAGGCACTAGATCGGTGCTCTGATACCAATGA TAGAAACCAAACCCGAACTCTGTGTATTATTGATAAGCCGTAATCCCCATATTGGGAACTAAGGGGATACAAGAGAGAAG GGATACCAAACACCCTTCAAACCCAGAAAGAGACCACTCTCCCTCTAGAACCCAAAACCAAATGATTAACTAGATGATTA ATGTTCTCTAAGCCCCTCCTATTTATAGGCAACAAGCCTTACTAACCCTCTTAACTAACTATCTAATTATATGATAACTC CCTCACTTAACTATCTAAACCATGTGTACCTATCAGTAAGACCCATTCCTTTTTGTTTATCTCAAGTCTCGAGTTATATA GATGATGTTTGTAACTTGATATTTTTAATTGTTTTTTGAAATAGTAAGAAGACTTAATTGTTTTTTGACATAGATATATT TTAATTGTTGAGCTTCTTACTATACTGTTATAGTAAGAAGTTTTAATTTTTTTTTTGAAATAGATATTTTTTTTATAAAT ATATATGTAATCTATGGAACCATCATGTTTTTTAAATATTTATGATAAGAATTGAAAGAGAAATTGTAGAATAAAAAGAT CAAAACAATGATAAAGTGAATAAAGAGAAAAAAATGTCAATCACTAAATTAAAATTGAAATAATTAAGGAAAAGTATAAT GTCATAATATTAATAACCAGTATGATAAAACTAGCAGGCTATTTTGTTAGCAATTTAGCAGTGGCTGGCAATATATGCAG TCTTTTTTGTGTGTGTTTATGTTGTTACATAATTCACTGAATAATTTTTTTGTGATTTCATTTCCAGGCGTTCTTCTCTT CCAATGCTGCAGCTCAGGCTTCAAGAAAGTCCTCTCCTAGAGTGACCAATGAGGCTGTTCAGAAGGCTGTGAGTTTCTTA TTTTTGTGGTGTCTGATCCGCTGTTCGTTTTTTTTGAACTGAATTTGTTGTGAAATTGATTCTCTTATTACTTATGACAT CTTTTCTTACCCTTACAGGCTGCTGCACTGAAGGGCTCTGATCATCGCCGTGCAACAAATGTCGGCGCCAGACTGGATGC TCAGCAAAAGAAGCTCAACCTTCCAGTTCTCCCAACGACCACAATTGGATCCTTCCCTCAGACTGTTGAACTGAGGAGGG TGCGCCGTGAATACAAGGCTAACAAGTAAGATATTCTGAGAGCTGATAACAGGCTTGTTTTCATGAACATTTGCTTTTTT TTTATTGATTCTGATCTTGTTGTTTTCAGGATCACGGAGGAAGAGTATGTTACTTCTATTAAAGAGGAGATCCGCAAAGT TGTTGAACTCCAAGAACAGCTTGATATTGATGTCCTGGTACATGGCGAGCCTGAGGTCAGCTTTCATCTTCACATAAGAA CTAAAAGATTAATATGCTGTAGCAGAGAATAAGAGAGTGCTGTTACCCTGTTATTTTGATAGATCATATATCTTCACTTC TTTCTTACTGATCTGAAAAATAAAAATTTCCTACCAGATTTTCTTCTCATTGTGATGTTGTGAACTCCCAATTCCGTTTC CCTCTAATTGTTTTGGTGTTTTATTGCAGAGAAATGATATGGTTGAGTACTTTGGTGAGCAGTTATCTGGTTTTGCCTTT ACTGTCAATGGGTGGGTGCAATCTTACGGATCTCGTTGTGTGAAGCCACCAATCATCTATGGTGATGTGAGTCGCCCAAA ACCAATGACAGTATTCTGGTCATCTATGGCTCAGAGTATGACGAAACGCCCAATGAAAGGAATGCTTACCGGCCCAGTAA CCATTCTCAACTGGTCCTTTGTTAGAAATGATCAACCTAGGTAAAATCTAAAGACCCATTGTAATTTGAAAGGAAATGAA TAAAAGTTAAAGTGAGCTTAGAAGAGAAATAAACTAGTATTCAGCAATCACCATATTGTTATTTCTAAGATGGTGTGAGG CCGATTTTGCAGATCTGAGACTACCTACCAGATTGCTTTGGCTATCAAGGATGAAGTAGAAGATCTTGAAAAAGGTGGTA TTGGTGTTATCCAAATCGACGAGGCTGCTTTGAGAGAGGGGCTTCCATTGAGGAAGTCAGAGCAAGCTCACTACTTGGAC TGGGCTGTCCATGCCTTCAGAATTACCAATATTGGAGTGCAGGATACTACTCAGGTACTTTTGAATTACAAACCATTGGG TTAGAATAATTTGTTTCCCTTCTATTGTATAATAAAATGAAACTCATGATAAAAGTCATCAAAATTTTATCTACACATAA TTAGCTTATGTATTTTGTGTTAATAACAATTGCCAGATCCACACCCACATGTGCTACTCTAACTTCAATGACATCATCCA CTCTATCATCGATATGGATGCTGATGTGATCACCATTGAGAACTCACGTTCGGATGAGAAGCTTCTGTCGGTGTTCCGTG AAGGAGTTAAGTACGGAGCTGGAATTGGCCCTGGAGTCTATGATATTCACTCCCCCAGAATACCACCAACTGAAGAAATC GCAGACAGGATCAACAAGATGCTTGCAGTGCTTGAGACAAACATTTTGTGGGTAAACCCTGATTGTGGGCTCAAGACTCG CAAGTACACGGAGGTGAATCCAGCCCTCACAAACATGGTTGCTGCCACAAAGCTGATCCGCAACCAGCTTGCAAGTGGCA AGTGA
CDS sequence (LotjaGi2g1v0109800.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATCCCATATTGTTGGATACCCTCGTATGGGCCCTAAGAGAGAGCTCAAGTTCGCCCTGGAGTCATTCTGGGATGG GAAGAGCAGTGCTGAGGATTTGAAGAAGGTGGCAGCTGGTCTCAGGGCATCCATCTGGAAGCAGATGGCTGATGCCGGGA TCAAGTACATCCCCAGCAACACATTCTCCTACTACGATCAGGTGCTTGATGCCACCGCAATGCTCGGCGCTGTTCCACCC CGATACGGGTGGACTGGCGGGGAGATTGGATTTGATACTTACTTCTCCATGGCTAGGGGTAATGCCTCTGTGCCTGCAAT GGAGATGACCAAGTGGTTTGATACCAACTACCACTTTATTGTCCCTGAACTGGGACCTGATGTGAATTTCACTTATGCAT CCCACAAGGCAGTGGATGAGTACAAGGAGGCCAAGGCGCTTGGAGTAGATACAATCCCAGTCCTCATTGGCCCTGTATCA TACTTGGTGCTCTCCAAACCTGCCAAGGGCGCTGATAAATCCTTCTCTCTTCTTTCCCTCCTCCCAAAAGTCATTGCTGT CTACAAAGAAGTTGTGGCTGATCTTAAGGCAGCTGGTGCTACATGGATTCAGTTTGATGAACCTACCCTTGTCTTGGACC TTGACCCTCACACATTGCAAGCATTTACTGCAACATACTCAGAACTTGAATCTACTTTATCTGGTCTAAATGTTCTTATT GAGACCTACTTTGCTGATGTTCCTGCTGAGGCATACAAGACCCTCACTACTCTGAATGGCATCACAGCGTTTGGATTTGA TTTAGTCCGTGGAGCTAAGACTCTTGATTTGATCAAGGGAGGATTTCCCAGTGGAAAGCATCTGTTTGCTGGAGTGGTTG ATGGAAGGAACATTTGGGCTAATGATCTTGCTGCTTCTCTCAGTACATTAACTAGTCTTGAGGGCATTGTGGGCAAAGAT AACCTTGTTGTGTCCACCTCCTGCTCACTTCTTCACACTGCTGTTGATCTTGTTAATGAAACCAAGTTGGACAATGAGAT AAAATCATGGCTGGCTTTTGCTGCCCAAAAAATTGTTGAAGTAAATGCATTGGCCAAAGCATTGTCTGGTCAAAAGGATG AGGCGTTCTTCTCTTCCAATGCTGCAGCTCAGGCTTCAAGAAAGTCCTCTCCTAGAGTGACCAATGAGGCTGTTCAGAAG GCTGCTGCTGCACTGAAGGGCTCTGATCATCGCCGTGCAACAAATGTCGGCGCCAGACTGGATGCTCAGCAAAAGAAGCT CAACCTTCCAGTTCTCCCAACGACCACAATTGGATCCTTCCCTCAGACTGTTGAACTGAGGAGGGTGCGCCGTGAATACA AGGCTAACAAGATCACGGAGGAAGAGTATGTTACTTCTATTAAAGAGGAGATCCGCAAAGTTGTTGAACTCCAAGAACAG CTTGATATTGATGTCCTGGTACATGGCGAGCCTGAGAGAAATGATATGGTTGAGTACTTTGGTGAGCAGTTATCTGGTTT TGCCTTTACTGTCAATGGGTGGGTGCAATCTTACGGATCTCGTTGTGTGAAGCCACCAATCATCTATGGTGATGTGAGTC GCCCAAAACCAATGACAGTATTCTGGTCATCTATGGCTCAGAGTATGACGAAACGCCCAATGAAAGGAATGCTTACCGGC CCAGTAACCATTCTCAACTGGTCCTTTGTTAGAAATGATCAACCTAGATCTGAGACTACCTACCAGATTGCTTTGGCTAT CAAGGATGAAGTAGAAGATCTTGAAAAAGGTGGTATTGGTGTTATCCAAATCGACGAGGCTGCTTTGAGAGAGGGGCTTC CATTGAGGAAGTCAGAGCAAGCTCACTACTTGGACTGGGCTGTCCATGCCTTCAGAATTACCAATATTGGAGTGCAGGAT ACTACTCAGATCCACACCCACATGTGCTACTCTAACTTCAATGACATCATCCACTCTATCATCGATATGGATGCTGATGT GATCACCATTGAGAACTCACGTTCGGATGAGAAGCTTCTGTCGGTGTTCCGTGAAGGAGTTAAGTACGGAGCTGGAATTG GCCCTGGAGTCTATGATATTCACTCCCCCAGAATACCACCAACTGAAGAAATCGCAGACAGGATCAACAAGATGCTTGCA GTGCTTGAGACAAACATTTTGTGGGTAAACCCTGATTGTGGGCTCAAGACTCGCAAGTACACGGAGGTGAATCCAGCCCT CACAAACATGGTTGCTGCCACAAAGCTGATCCGCAACCAGCTTGCAAGTGGCAAGTGA
Protein sequence (LotjaGi2g1v0109800.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLKKVAAGLRASIWKQMADAGIKYIPSNTFSYYDQVLDATAMLGAVPP RYGWTGGEIGFDTYFSMARGNASVPAMEMTKWFDTNYHFIVPELGPDVNFTYASHKAVDEYKEAKALGVDTIPVLIGPVS YLVLSKPAKGADKSFSLLSLLPKVIAVYKEVVADLKAAGATWIQFDEPTLVLDLDPHTLQAFTATYSELESTLSGLNVLI ETYFADVPAEAYKTLTTLNGITAFGFDLVRGAKTLDLIKGGFPSGKHLFAGVVDGRNIWANDLAASLSTLTSLEGIVGKD NLVVSTSCSLLHTAVDLVNETKLDNEIKSWLAFAAQKIVEVNALAKALSGQKDEAFFSSNAAAQASRKSSPRVTNEAVQK AAAALKGSDHRRATNVGARLDAQQKKLNLPVLPTTTIGSFPQTVELRRVRREYKANKITEEEYVTSIKEEIRKVVELQEQ LDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSSMAQSMTKRPMKGMLTG PVTILNWSFVRNDQPRSETTYQIALAIKDEVEDLEKGGIGVIQIDEAALREGLPLRKSEQAHYLDWAVHAFRITNIGVQD TTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLA VLETNILWVNPDCGLKTRKYTEVNPALTNMVAATKLIRNQLASGK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 765 | 765 | 0.0 | ||
| PANTHER | 1 | 765 | 765 | 0.0 | – | |
| PANTHER | 1 | 765 | 765 | 0.0 | – | |
| Hamap | 1 | 760 | 760 | 34.446 | ||
| CDD | 3 | 367 | 365 | 0.0 | – | |
| SUPERFAMILY | 3 | 395 | 393 | 5.76E-113 | ||
| Pfam | 3 | 315 | 313 | 6.0E-117 | ||
| Gene3D | 5 | 525 | 521 | 0.0 | ||
| TIGRFAM | 6 | 760 | 755 | 0.0 | ||
| Gene3D | 390 | 753 | 364 | 0.0 | ||
| SUPERFAMILY | 397 | 760 | 364 | 3.01E-111 | ||
| Pfam | 432 | 755 | 324 | 2.1E-156 | ||
| CDD | 433 | 756 | 324 | 4.04641E-148 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity | Catalysis of the reaction: 5-methyltetrahydropteroyltri-L-glutamate + L-homocysteine = L-methionine + tetrahydropteroyltri-L-glutamate. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. | ||
| Biological process | Cellular amino acid biosynthetic process | The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents. | ||
| Biological process | Methionine biosynthetic process | The chemical reactions and pathways resulting in the formation of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins. |
Expression pattern of LotjaGi2g1v0109800.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…