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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0116900 |
| Transcript ID | LotjaGi2g1v0116900.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP-dependent RNA helicase; TAIR: AT4G09730.1 RH39; Swiss-Prot: sp|Q5VRY0|RH39_ORYSJ DEAD-box ATP-dependent RNA helicase 39; TrEMBL-Plants: tr|I1JDA7|I1JDA7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0116900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:43086116..43096421) extracted from Lotus japonicus Gifu genome v1.2.
CTTTCTAATTACTTACCCTTACCCTTCAGCTTTGTGTGCTTATTTCCTAACTTGCTTCATTGTAAATTGTAATGCTCCTC CTGAAAGGATCACTCTATCTGAGCCTAAAACCCTTAAACAGAGTTAAGCGCTGCCACAACACAAGAGCTCCTTCAATGGC GGGAGCTACAGGAAGAACCCTCTTCACACTCTCTCTCTCCTCCAACCTCACCACACGCCTCTCTCGTCATGCCAAGCGCT TCCCATTTCTCACGCCATCGAACCCCATCACCGTTTTGCCACGGTTCAGGCCTCTCTCTTCCATCGCCGCACCAGAAGTT GCGGCGGAACCTGACCAGATGAAGCACTCCATGCTCCTCGAGAGGCTCAGAAGCAGGCACCTCAAGGACAGTGCTAAAAC CCCAGAAGCCAAGAATCCCCCAAAGAAGGGTGCTGCGAGGAAATCTGAGGAGGAGGAGAAGAAGAAAGTGGCGGTTGCTG GGAGTTTTGAGGAGTTGGGAATCGGTGATGAGGTTATGGGTTCTGTTAGGGAAATGGGTATTGAAGTTCCCACTGAGATA CAGTGTATTGGTGTCCCTGCTGTGTTGGAAGGGAAGAGTGTGGTTTTGGGGTCTCATACTGGATCTGGCAAGACCCTGGC TTACTTGCTTCCCCTTGTTCAGGTACTTCTTCTCCATTGATTTTGAAAATCTCAGAGTTTGTGTTCAAGTAGATGTATTT TTACACTGTATGTATCACTTTTTCTATGTCAAGTCCTGTTCTATTATTAAAATGTACCATACAAATGACATAATGTATAT GCTATATTCCATCTTGTTTATGCCAATTGCTTGATTTGTGAGATATTGCTTTACCGATTGGTCTAACTTGTGTGGTTTTT TTTAATATTACTTGTTTCCTACATTACATTCCTTTCATTTATTATGTTATTGAGTTAAATGATTTCATGCTGAGGTAATT TTGTCTATCCATCTATTGGGGGTTGCTGAGAACCTGAGAGACTGTTAATTTGTGGCTGTAGTTGCTAAGACGGGATGAAC AATTGAATGGAGTACTGATGAAGCCTAAACGTCCCCGAGCTGTTGTGCTATGTCCTACAAGGGAGTTGTCTGAGCAGGTA TTTGGGTGCGCATTTTACTTATGTTTCAGAGACCGCTTCTGCTGTGTTGGATTTGTACAAATTAATATATAATGGTTTTG TAGGTTTTTCGAGTTGCAAAATCAATAAGCCATCATGCAAGATTCAGGTGTACCATGGTAAGTGGTGGTGGTCGTATTCG GCCTCAGGAGGATTCACTTAATCACCCCATTGATATGGTGGTTGGTACTCCTGGCAGGATTCTTCAACACATTGAGGAGG GAAATATGGTATATGGTGACATCAAATACTTGGTTAGTATCCCAACAATTGACAATTTTGACTATGCTATAATGAGCTGC AAGCTTCACTTACTGACATTGGTGATTGGTCTTTGTTTTGAAGGTATTGGATGAGGCAGACACAATGTTTGATAAGGGTT TTGGTCCTGATATACGCAAATTTATTGGCCCATTAAAGCATCGTTCTTCAAAGTCTGAGGGGCTAGGTTTTCAGACTGTC TTGGTCACTGCAACCATGACAAATGTACGCTGATTTGCACCATAATATTGTTGGCTACATGCGAAGTAAATATTAATGGT GTAGAAAATAATTCATAGAATGATTATAGTATTATTATAAATTGTTGGTTGTTTGGATTTTGACGTTAACAATTGGATTC TTCTTTCTTCCTGGTTCATATTAAATGTTAAAGACTTTTTCGGGGTATTTGCAGTGTCTTTATATGCATTACTAGCTGCC TTGCTTTCAACTTTCTGTATGTCTTAAACATTTTCGCACTGATAACAAAGATTTGGTTCTTTTTCTTAACTGTGTACAAT TTCTGGTTTATATAAATCCAATGAACAAGTTCCAGGATGATATTTAAAAACTACCAGAGTGTTGACTTCTTTTAGTTTTG CAGGCTGTGCAAAAGCTGGTTGATGAGGAGTTTCAAGGCATTGAACATCTGCGCACATCAACGTTGCATAAAAAGATTTC TACTGCTCGCCATGATTTTATTAAACTTTCAGGTTCTGAGAACAAGCTGGATGCATTACTTCAGGTATACTCCTATAGTT AGCCATCCTCCCTATACATGTCAACCAATGGCTGGTATTTACAGGTTGTTTTGAGATGTGGTGTAGCTCTAGTGGGACCA AGTCTATTAGGGAATTGATTGATCCTGGGGTTGAATTACGCTCAAGTTGCTTTTATACTTTTGCTAGTGGGATAAGTCTA GGTTTCTGTGCTTTGGTGTTGGGATGCGGTGGTCCTGGGCTTGCAATAAAAATACCACTCTTGTTTATGATTCTAGTTTA TAATTGTTTGCTATTATGGATTTCTTATAAGACATAACTACCTTGTCAAGTGTTGCCAATTTTTTAGATTTATGACATAA TCACTTGCGATACGTACGATACTGATAACCATGGTGTTATAGAATAGATACACATGTATGTAAGAATTAAGATATTTTCA TCACTATCAGTATTACGTAGGTGGTTTGGATGTTGTTTTGATTCCTTGGGTTTTTATTCTGTAATTTGTGATCATGTGAT GGCAGGTATTAGAGCCAAGTCTAGCAAAGGGGAATAGGGTGATGGTTTTCTGCAATACATTGGATTCAAGCCGTGCTGTG GATCACTATCTTGATGAAAATCTGATTTCTACTGTGAACTACCATGGGGAGGTACCGGCAGAACAAAGGTAATATACTAA TTTAAGATTCTTTATCGACTTCATCCACTTGATACTGTTATCTGCTGTTGCAGTGACATTATCTTTGTGCTTTGATGAGT TAGTTAAGGTGCCTGGAAATAGCTGCATGAACTATTGAGATTTTTTGGGATTAGATGGAAAAATAATTGTGTTTGGAAAA TATTAAATACATTTTACTAATGAGATTCAATAATTCTGTTACAAAGCACTGACTTCAAACCTTTTCTTGTGCTAAATCTA TGGCTTTTAGATGACAACAACACCCTCTACTTTTGGGGCACTACAAGTAACTGTAACTTAGTCAGGAAAACATTCCTAAT CTCATAGTAATAATTAATAAATGCTTCTGAAAATTCCTTCTGAGTTTGTTACTGATAAAATCACTTGACCAAAGTGATAT CAAACTTAAAATCAAATAATAAACTAGTTGTAATTGGCTTCACAAACAGTGATCTGAACTACAATGTAATTGAACAAAAT GAGCACTGCTTTAGAACAGTAGAACGATGGCTAGACAGCTAGCCTAGACACACAGTCGAGAAAACAACAGTTCTGGAAAT TGTTGCCGTGGGAAGAGGACTCAAGTACTGGACTACTGGAAGGATGTGTGACCAAAGAAAACAGGCACAACTGAAAAGAC ACAGTTGGCCAGGAAGATACCTTGGCAAGTGGACAGCATACTTCCGTTTATTGGTTACACGTACTGCGAAGTCCAAAATC TCCGAATAGCTTTTCGTAATTCATAATGAATAATGATCATCATTTGGAAGATTTAATAAACAAAAATTACTTCAAAATTG AATTTCGGAGGAACATGTTAGAAGTTAGAACCCAAAAACTGGCTCTGGCCTGATAATGGTTCAAATTGGCTTGGTCAATG TCTTATATAGGGTACGTATGATAAGAACCTTGGGAGAACCACACCACAAAAGCTAGCTGTTGTAGTTGGAGAGCCCAAGG TCTTATAAACCCCATATTAGAATCCCATACTTCCAATGTGGGACTCAAGTCCCATACCTTGCAATGGGGTCCTAACATCC CACCACGCTCCGCAGCCCCGGCGCCCACGCGGGCTGGCTGTGCACTAGCCCCTTGGCTAGTCCCGGGCGAACACTGCAAT GCCGGCGTCACCACCCGCGCCGCTCGTTTGCAGCTCAGAGACAATGGTGGAAGGCTTCAACGTACAATTTTGGGGAACTC ACTTTCTATGCACTTACTCTTATTTAGGCAGTACTACTGATTGAATGTCCTTTGTTTTTGAACAATATTAGCTTTAAGGC ACATTAATTGTTTAGGGTCAGTCTAAAACGTTGAAGATAAGTCAAATCAGGACCTGAATTCAACATGAAGTCTATTGTAT GTGTCATGAACCATCCCAAAAGTTTATACTGTTCAGGGAAGACACATGAATGATTAATATTTCGAAGACGTCCTTTAGCA AGAACTCATTGCCTCATTAGACTTGAAGCATGAACAAGGCATAGGTCCAATTACCTTGTCTTGAAATTCCCCATTATTAT TGAAATAATAGGTGCAACAAGGATTGAATTCCAGACCACTTGGTCATAGAGGCTTTGACATCATGTCGTGAACCAACTAT TTGAAAATGTGGGTGTGGTCTAACTTGTTTTTAAAAGCTTATGCATGTATTTATTGCATTTATCATTTTGTTAACTACTT TTTTTTCCAGCGTAGATATTATCAATATATATAATATTGGTGTAGATTAAATTATCTATTCGATTATTTCATTTAGAGTT TTAATTTGGTGATTAAGGTTTTCAATTTGGGGGATATTTTATTGTTATTTAGTTTAGGGGTTATTCTAATTTTTTATTAT CTTTATCTTAGAGTTTGAATTGTTGTCTGGTTATTTGGCTTTGTTCGGTCTGTCTATAGGCACTAATAGACTTTTAGAGG CTTTTGATGATTCTATGATATGCAACTTGTTTTTCCAGAGTATTTATGTGTAAGTTGAAAGAGTATTCAACACCTAGACA AGTACACTTGGTTAAGAATTTGGTGTTATACAACTTGTTAATTTGGTGATTAATGGTAATTCAAGTGTGATGTCTAGAGT CTCACATTGGTTTAGAATGGGTGAGGTGAAGACAATATAAGAGAGATGTGACCCATTAACCCAATGCCTGAAGGTTTTGG GTAAATATGTGGTGGCCGGTTCTCTCGCTTGTCTTCGGTGTTGGCCCATTGGTGCTGGTTCTCCTTCTCTGGGCTCCTCC TATCTACCCAACACACTTCTCTCTTGGAATACTTTTCATACATCAAAGATATAATCATTTCGAAATTCGAATAACTTGCG CTCTACCATAATTATGACTTTCCTGATACTCAGGTTGATGAATCATGCTAAATTTTTGTTGATTGAACTAAACTTCCTTA TAAGACTTAGAGACACATGTATGTGCAGACTGCAGACACTACATTGTTTGCTTGATCGGAAGATGAATAATTTTCAATAA AATGTGTTTTTTTAATGTTCATAGGCAATGTTTGTAATTTATAACATTTCATATGTAAATAATTAATATACAAACAAATG GAGTAAGAGGGGGAAAACCATGCAGATCTTACTGAAAGGATATAGTATGTGCATTCAAGTTGCATGTCAGAAACTTTTAA ACCTTGGGTGTCATTTAAGCCAGTGCTACCATGATCTTCTCTGCTCAGATGCTCCATCTCCTGTTATGCTCATTTACCAT TAATTTGTATTCTTTTCTTTTAAACCCAGGGTTGAAAATCTCAAAAAATTTAAGAGTGACAATGAAGATTGCCCTACACT GGTTTGCACAGACTTGGCTGCTAGGGGTCTGGACTTGGATGTAGATCATGTTGTCATGTTTGACTTCCCAAGGAATTCTG TGAGCATCATATCTATTATAAAAAAATTATTATGTTACAAAGAACTTATCCTTTCTTAATATTAATCTGTTACTTAACAT TGCTTTCACTTTCAATTTCAGATTGACTACCTTCATCGCACAGGTAGAACTGCTCGAATGGGCGCAAAAGGTAACACTTA TTCCCCACATTTTAAAATTTTGTCCTTATTCTTGAACTTGAGGACTTTTGCTAATCAAATCTTATTCTCATTGAACTACA TGGCTTTTTTTACATCAATGATTAAACATCTCATCTTTTAAAATTTTTTATAAGTTTTTATTCCTGTTAAGTACTACATA AGTTTTTGAATTGTCAATGTCAAAACTTACCATAACGTTAAATTTGAAATTCTTTTAATCAAATTGACAGACACAGCAAA TTAATAAACTTAAATTATATTTTTATCTTAGTTCACTTAAATATTTATATCAATTATTTCTCTTAAATTTTAAATTATCA CACAATGTACAGAATACTTTGTGGTTCGTATAATGTGTCTATCTGTTTAGCCAAATTGAGAATCCTGTTTTCTCTTCTAT TATTTATTTATTTTTGTGAAAAATGTAGCATTAATCAATGTTCTTGCACATACATTTTGCAACTGAACTTCTACTCAAAT AATGGTGACCTTGATATTGCTTGAAAATAAGAAGATAATGCGGATTACTCTGTCCTCAATGTGGGAGTACCTGTTTAAAG CATATCACCTATAGTTAAGAAGAGAAATACTAGCAGAACATTTTCTTGAACACACATTATGACTGGTCTATTTCATAAAT CATTTTCTTGAACACACATTATGATTGTACCTGTTTAACTAAATCCATCCTGCTTTGTGCCTGACATATCTTAGATTCGA ATTACGTATTGGTCATTGCAATTGCGACTTTTAAACATTTGCTGTTGTATTAGGAAGAATAAAATCACTCTTTTCTGTTG CAGGGAAAGTAACAAGTTTGGTTGCTAAAAAGGACTTGAACTTGGCAGCCAAAATAGAGGAGGCAATAAGAAAGAATGAG AGTTTGGAGGGTATCACTAAAGAAAGTGTACGAAAGGACATTACGCGGACCCAAATCACTGAGCTGAGGGGAAAGAACAA AAACTTGGTAAGAGTTTCAAAAGTTAAGGACAAATCTGGTGGCCACGCCAGTTCTGGGAATTCCAGGGCAGGTATGCAAT CTGGCAAAGGATCACCACCAGCTAAGTCGGTGAAGAAAGGGATTAACGTATCAAAATCCGGTGACCGTGCCTGTTCTGGG AATGCTGGGTCAGGTGTGAAATCTGGTAAAGGATCACGACCAGCAAAATCTACAAAGAGAGGGATTAACGTATCAAAGCC TGTAAGATCTTCCAGTGGAAATAGCTCAAGTAAAGGTTCTTCAGAGGGTAAGCAAACAAGGAAAAAGACGAGTGCCACCA AATCTACAAATTCTAAACTCAGTGTTGTGGGGTTTAGGGGGCGGAATTCATCATCAAATAACAAGCCATCTTCTTTGTGA AGTGGAGTGGGGTCATATGTACTGAATAAATAGTAAGTAAATGGCTCTTATTTCTGTATTATTAGATAAGATTTTTTCTG CAGCTAGAATAGTGTAATTATTAACATGGTTTTGCCAGGCATTATAGGTGAACAATCCAAGAAAAAATTTATGAGGAAAA TACTTTCAAACTAAATATGCATGTTTTTCTTTCCAAAATCGAAAGGGCATTCTACATCTTCTAAAGATTACAGGAGTTTC ATACATGGATACAAAAGAGACACTCTTGACAGGCTAACAATGCATGACTTTGGTTTTACTATTATATGCTACGGTATGTT TTGTCTGGTAAATCTGAGACTTCGAGTTGTTGATGGAGCACTTGCTCTGGTGAATCTGGTATGTTCTGCAAGTGAAGAAG CTTGTTGGGTTCTTCACATCCTTATTTCCAGGTTAATAATGGACGTGAAGTTTTAGCAGGGTTTACTACATTGCCATCGG AGTCATATATAATGACACCAGAGAAATCTGGGAGCTGGCACTTCCCACCCATGAGAATGTTCTTCTGCCAAATTGAAGAC TCTTGTTGCTCACCTTCACAGATCACAGCTTCATTGTTAAACTCTATCACAGGTTCTTCAACAAAGGCACCATAGCAAGA GCTCCATTGACGCCGCCATTTGCGCGAATGAGAAGCACACATGAGCAAAGCAATGGCACATAGTGTAAGGGTCATAACAG CAAGGCCAATATTTGAAGTGCTTGGCAAAGGGTGAGTCACTGAAAGTGGGCGAGCCATAGGGAAGACAGGTTTGAAAATG GGGTGTGTTACGAACTTGAAGTGGGTATATGGTTATATATATGATGATATGATTCTCAACTAGAAAGTGTAGTTGGTGGT CTTTAAGGATTTGTTAGTATTTGGTTATTGACAATACTTAAACGCGGGTGGTTTTGGTATAACATGAATTTGGAGTGGGA GAGTGTAGGTTAGGTTGGATATTCTAGTCTAACCCTCTTCACTGAATAAAAAACTTTTTCTCGAGATGAAATCTTTTGAA ATGGAAAAAGTATATTAAATTTGGGTTTCAAATTAATTGTTACAAATCTAAAATTGTGTGTTGCACCTGATTCACTATGT AGCGTATAGCATGGACCACTAAAATTAGTGGTTCATGCTGCACCAAAGTTAAAAGTTTCACTCTCTGCACCCTACTTGGC ATCTGGGCTTGGGGTTGGTTTGCAATTTGGGACTCGAAGCGGAGGTCAAGTGGTGGAAGGCGCGGTGGAGTGGAATGGTC GACCGTCGATGGCATGGAGGCTGGCTGCTTGCTGTGCTTCTCTGTGAGATCGTGAAGGAGATGGTTTGGTAGGTCATCTT GTTATTTCTTAAATCTTGAAAAGTTCAAACTTTTTTCCATTGGAGTCCAATAGCTTGATTTAAGAAATTGTATATCATAA ATAGATTTAACACTATTAAACTTAAAACGTGCAAAGGCTTTAATTTGGTTTAATGATCGATCAATTACTGAAGATACATT AGTGCTTAAGAGAATAATTAAGAAAAAGAATACAATTCATAAACACCACAGAAATAGAGTTAAAAATAAATCTCAGGTTT TAGGGGATGTTGCATCCATGATGAATCCTTGCTTACAAATTATTATCTCTTTGAAATGTTAGCATAAAATTGGATAGTAA TCTCACAACCTTAGTTTGGCTTTGATCCTTGAACAACTTGGATGACAGAACATACAGTTTGAATCAGTGTCAGCAAAAGC AGCAGCACAGCAGCAGTGGTAGATGCTATTTTCCAAGGAGTGTTGAAGTAGTCATGTTTAAATATTGACATGTATTTGTT CCAAGGATTTGTGTCGAAATGATCATTCAAACCCATGCAGATATTTTTATACTTTGCACCAAAGGATGGCAAAGAAACAT TTTTGCGGAGATTTCTAAAAACTGTAACCACTTCTTTAGCATCACCTATCAAATCGACAATAATTTTCTTATCAACCAGT ATGTCCACATCTTTCTCAGTCTTGATAAGAAAACCTAGGATCCAAAAATATTGAGACATGTACTTTGCCTCTCGATGGTG ACATTGCTCAAATACCAGAATGTTAGTCATGAAAACCTCTGTTATGTCATGCACGCGGAAGTGTGGCATTGTTAACACAC CCTCATTAAGATCTATGTCAAGCAAGGATTTGTGCTCGTCTTCACTCGCCTTGAATACCAAACCTGCTTCTGATAACTGA GTCGCGCTGTAAACATGCTGTATTTCCACATCCCTTTCTATTTCAAAATCGAAAGATGAAGGTATAATAAAAGTTCTTAG AATATCAGTTAAATGTTTTGGATGTGAAAATCCTTCAGGTAATATGTTTTGCCGGTTGTATTGTCCAAAATATTGGAAAG TAACACTAAGAAATGAAAAAAATGTCATGTTCATACCAGAGAGATTGTATATGTCATCAAGAACAAAGAAAGGAAGCTGA TTCTCGAGGAGTAACAAGTCACTATGAACGTGAACCAGCAACCATGGTTTCAAAAATAAAGGGTCGTTTTCCTCCCAATT CTCGAACATATAACATCTGAGAAAGTGCTCAATAATGAAACAAGCGTCGACAAGGATAATCTTAATGAGTTCATTGCTGT CAAGGTTAAGAGTCATTGCGTAAGAGCTTCGAATTTTGGTTTCACATTCCTCAAGTTTGAGAACTAAATCCTTCACATTG AGGTGCGTTCTGTGAAGGAATCCCTTGAGGTATTTCAGTTTCAGTTCTTCCATTTGCATAAAATAATTTCCCTCCAAACC AGAGCCATGTTGTCTGTGAAATGGGCCAATGCAAACAACTTGAGGAGTGAAGGCTTTTGGATTGAGTTGGCGAATTTCTG GTGGGACTAAATAAATGCATTGTTCTTGGACTGCAGACATTTCTGGAAGAACCACTAGTTCAAGATTTTCACTGAATTCT GTCTTCCAATCATTTAACACTCCCTCCTTTTCCTCGAGTTTGCTCATATCTTGGTGAATAGTTTTGACAAAACAACCTGA AAGCTGGATAAGACATAAACTCCAATCAAATCAACATATATATTGATATCCATTTTGTTCGAACAT
CDS sequence (LotjaGi2g1v0116900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTCCTCCTGAAAGGATCACTCTATCTGAGCCTAAAACCCTTAAACAGAGTTAAGCGCTGCCACAACACAAGAGCTCC TTCAATGGCGGGAGCTACAGGAAGAACCCTCTTCACACTCTCTCTCTCCTCCAACCTCACCACACGCCTCTCTCGTCATG CCAAGCGCTTCCCATTTCTCACGCCATCGAACCCCATCACCGTTTTGCCACGGTTCAGGCCTCTCTCTTCCATCGCCGCA CCAGAAGTTGCGGCGGAACCTGACCAGATGAAGCACTCCATGCTCCTCGAGAGGCTCAGAAGCAGGCACCTCAAGGACAG TGCTAAAACCCCAGAAGCCAAGAATCCCCCAAAGAAGGGTGCTGCGAGGAAATCTGAGGAGGAGGAGAAGAAGAAAGTGG CGGTTGCTGGGAGTTTTGAGGAGTTGGGAATCGGTGATGAGGTTATGGGTTCTGTTAGGGAAATGGGTATTGAAGTTCCC ACTGAGATACAGTGTATTGGTGTCCCTGCTGTGTTGGAAGGGAAGAGTGTGGTTTTGGGGTCTCATACTGGATCTGGCAA GACCCTGGCTTACTTGCTTCCCCTTGTTCAGTTGCTAAGACGGGATGAACAATTGAATGGAGTACTGATGAAGCCTAAAC GTCCCCGAGCTGTTGTGCTATGTCCTACAAGGGAGTTGTCTGAGCAGGTTTTTCGAGTTGCAAAATCAATAAGCCATCAT GCAAGATTCAGGTGTACCATGGTAAGTGGTGGTGGTCGTATTCGGCCTCAGGAGGATTCACTTAATCACCCCATTGATAT GGTGGTTGGTACTCCTGGCAGGATTCTTCAACACATTGAGGAGGGAAATATGGTATATGGTGACATCAAATACTTGGTAT TGGATGAGGCAGACACAATGTTTGATAAGGGTTTTGGTCCTGATATACGCAAATTTATTGGCCCATTAAAGCATCGTTCT TCAAAGTCTGAGGGGCTAGGTTTTCAGACTGTCTTGGTCACTGCAACCATGACAAATGCTGTGCAAAAGCTGGTTGATGA GGAGTTTCAAGGCATTGAACATCTGCGCACATCAACGTTGCATAAAAAGATTTCTACTGCTCGCCATGATTTTATTAAAC TTTCAGGTTCTGAGAACAAGCTGGATGCATTACTTCAGGTATTAGAGCCAAGTCTAGCAAAGGGGAATAGGGTGATGGTT TTCTGCAATACATTGGATTCAAGCCGTGCTGTGGATCACTATCTTGATGAAAATCTGATTTCTACTGTGAACTACCATGG GGAGGTACCGGCAGAACAAAGGGTTGAAAATCTCAAAAAATTTAAGAGTGACAATGAAGATTGCCCTACACTGGTTTGCA CAGACTTGGCTGCTAGGGGTCTGGACTTGGATGTAGATCATGTTGTCATGTTTGACTTCCCAAGGAATTCTATTGACTAC CTTCATCGCACAGGTAGAACTGCTCGAATGGGCGCAAAAGGGAAAGTAACAAGTTTGGTTGCTAAAAAGGACTTGAACTT GGCAGCCAAAATAGAGGAGGCAATAAGAAAGAATGAGAGTTTGGAGGGTATCACTAAAGAAAGTGTACGAAAGGACATTA CGCGGACCCAAATCACTGAGCTGAGGGGAAAGAACAAAAACTTGGTAAGAGTTTCAAAAGTTAAGGACAAATCTGGTGGC CACGCCAGTTCTGGGAATTCCAGGGCAGGTATGCAATCTGGCAAAGGATCACCACCAGCTAAGTCGGTGAAGAAAGGGAT TAACGTATCAAAATCCGGTGACCGTGCCTGTTCTGGGAATGCTGGGTCAGGTGTGAAATCTGGTAAAGGATCACGACCAG CAAAATCTACAAAGAGAGGGATTAACGTATCAAAGCCTGTAAGATCTTCCAGTGGAAATAGCTCAAGTAAAGGTTCTTCA GAGGGTAAGCAAACAAGGAAAAAGACGAGTGCCACCAAATCTACAAATTCTAAACTCAGTGTTGTGGGGTTTAGGGGGCG GAATTCATCATCAAATAACAAGCCATCTTCTTTGTGA
Protein sequence (LotjaGi2g1v0116900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLLLKGSLYLSLKPLNRVKRCHNTRAPSMAGATGRTLFTLSLSSNLTTRLSRHAKRFPFLTPSNPITVLPRFRPLSSIAA PEVAAEPDQMKHSMLLERLRSRHLKDSAKTPEAKNPPKKGAARKSEEEEKKKVAVAGSFEELGIGDEVMGSVREMGIEVP TEIQCIGVPAVLEGKSVVLGSHTGSGKTLAYLLPLVQLLRRDEQLNGVLMKPKRPRAVVLCPTRELSEQVFRVAKSISHH ARFRCTMVSGGGRIRPQEDSLNHPIDMVVGTPGRILQHIEEGNMVYGDIKYLVLDEADTMFDKGFGPDIRKFIGPLKHRS SKSEGLGFQTVLVTATMTNAVQKLVDEEFQGIEHLRTSTLHKKISTARHDFIKLSGSENKLDALLQVLEPSLAKGNRVMV FCNTLDSSRAVDHYLDENLISTVNYHGEVPAEQRVENLKKFKSDNEDCPTLVCTDLAARGLDLDVDHVVMFDFPRNSIDY LHRTGRTARMGAKGKVTSLVAKKDLNLAAKIEEAIRKNESLEGITKESVRKDITRTQITELRGKNKNLVRVSKVKDKSGG HASSGNSRAGMQSGKGSPPAKSVKKGINVSKSGDRACSGNAGSGVKSGKGSRPAKSTKRGINVSKPVRSSSGNSSSKGSS EGKQTRKKTSATKSTNSKLSVVGFRGRNSSSNNKPSSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 100 | 352 | 253 | 7.1E-67 | – | |
| MobiDBLite | 102 | 132 | 31 | - | – | |
| ProSiteProfiles | 137 | 165 | 29 | 10.937 | ||
| PANTHER | 147 | 503 | 357 | 7.0E-82 | – | |
| PANTHER | 147 | 503 | 357 | 7.0E-82 | – | |
| CDD | 148 | 347 | 200 | 1.54805E-74 | – | |
| SMART | 156 | 365 | 210 | 2.1E-47 | ||
| Pfam | 161 | 344 | 184 | 4.1E-41 | ||
| ProSiteProfiles | 168 | 355 | 188 | 27.34 | ||
| SUPERFAMILY | 169 | 502 | 334 | 5.65E-59 | ||
| Gene3D | 365 | 566 | 202 | 4.9E-40 | – | |
| CDD | 368 | 500 | 133 | 9.31938E-40 | – | |
| Pfam | 380 | 491 | 112 | 3.0E-24 | ||
| ProSiteProfiles | 380 | 533 | 154 | 17.41 | ||
| SMART | 409 | 491 | 83 | 2.6E-24 | ||
| MobiDBLite | 547 | 678 | 132 | - | – | |
| MobiDBLite | 559 | 573 | 15 | - | – | |
| MobiDBLite | 622 | 640 | 19 | - | – | |
| MobiDBLite | 649 | 678 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of LotjaGi2g1v0116900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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