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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0135100 |
| Transcript ID | LotjaGi2g1v0135100.6 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like protein kinase family protein; TAIR: AT2G34930.1 disease resistance family protein / LRR family protein; Swiss-Prot: sp|Q9LY03|IRK_ARATH Probable LRR receptor-like serine/threonine-protein kinase IRK; TrEMBL-Plants: tr|A0A0B2SGV6|A0A0B2SGV6_GLYSO LRR receptor-like serine/threonine-protein kinase GSO2; Found in the gene: LotjaGi2g1v0135100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:49378627..49386031) extracted from Lotus japonicus Gifu genome v1.2.
CCACGTTGCAACCCAGCACCCAATTCACAAACCAAAATTCTTTATTCACTGCCGTCGTCGTTTTCTTTGCCTGCACCTCC TCTTCGATGCTCTCCGTTCCTCAAGTTCTGTTTCCCCACTTCCTATAAAAACCATACAGCACCCATTTGTAATAGGTGTT AGTGGAGAAAAGGGTTATTCATCCAATGCAGGGTTCGTGGCATTAATTTGGAAATTGGGGGTTGAGGTTCCCGGGAAGGA GGAGAGGAGTGTTCCATCTGTCAGAGTTGTTCTCCCAATATTATTAAGGTATATTCTCAACCCACAAATTTGGAGATTAG CATTTTACTGTAGGTTAGATGAAGGTAAAATTATGTAGGGCTTTGGGTATACAATTGAGGTTTTCGTAGTTGCTCACGGG TAGTCACGGGTAGTACGACATAAGATTATAGTTGCTGAAGGTTGAAATTTAATTTTGGTGATTCAGATTAGTCGGGTGAA GGTTCGTTGGTTTGTCGCGAAATTTCAGAGGACGGTCCAATTGGCTCGTTATAGCTGTGAGTGATTTTCCAATCACTGTG ACTTACTTTTAATAATTATACAACTGATGATTTGATTATTTTAGCATATTGCATATTTATTTAAATTGGGGAAACATGCT TTACAATTCGTGAAGATCATTAGATTTGGCACCACACTCATTAGAAATGTCACCCTACTTACGGAAACTTAGTTTCCGAA ATGTTTCGGAAATAAGGCTTCCGAAGCATTTTTCACTCAAAAGTGGGGTGTTACATGTATTTTACATTACAAATCACGAA TTAATTTCGGAATCTAAGATTCCGAAATAATTCGAAACTTGAAAATCCGAAAATAGGGGGTGTGAAATCTAATGGTTGGG GTGGCAAATCCAGCTCTCATTCGTGAATTATCTGAAAGCTGGTTTTATGAAAATGATCTGAGTCTGATTCTGAACTGACA TGAGAAAACAATTTATATTACTTTGATTTTGGAAATTATGCGAAACTGAGATTATGAACTTGGAAAGTTGATTTTGAGAC TTTGATGAGACTCTATGTTGCATGGATACGGGTACGGTACCGGTACGGGTACGGGTACGGGGTACGACATTTTTTGAAAA ACCAGGGTACGGGTACGCCAGTTATATATATATAAATAAATATATATATAAATAGAAATAAAATGTTTTTTAACACAATA TTTTTAATTAAAAATATTAAATCTCCTAATGGTCAATATTTATATGAAAGACCAACATAAAAACCATCACAACCTAATGA AAATCATCAAAAGAATATGTAACACCTTAACATATATCTTCAAACACATACCGTCATAGATAATCTTAAGATTGAAGAAA CATAACATAAGATTGAGTAACATTGAAGAGACATAACATAAGATTGTTCAACATAGACAGTAACATAAATTAAAATAGTG CAAAAGAGACAATACGATTGTTCAACACAACAAAACAATTAAACGATAGATTGTTCAACAACCAACAGTACAAAACCAAA GCTCTCTCAAACAGTAATGGTGTCATCATTCCCTTCTCCATCATCAGTGAACAAAAACGAGGTAATTTTGAACAATTTTT TTTTTTTTTAAAAAAAAGTATCCGGAGTACCCACGGGCGTACCCAAACCTACCCGTGGCGTACCCAAAAACGTAGCCCAG TTTTTTTTTTTTTTGGTGGACTTGGGTACGTACCTGGTACGTACCCACGGCGTACCCATGGCGTACCCATACCGGGTACA ATGCGATTTTTGGAGTACCCGTGCATCATATTGAGACTTGAACTGGTTTGAGAAAACGGTTTTGGGGATCCTTGATAGAA CCCCGTAGCCGTTAACGGAGGTAACGGCCTAGGTGCACCTAGCTAGCTTGATTCCGGGAGGAGAGGGCTATCCGTTAGAT GGAGCCGCCAGTGCACGGAAAGGGCTATCAACGAGATGTAGCTTCCCCCGATGATATGATACGATGCGACATGTGATATG AGAGAGGAAAGGGCTATCCGTTAGATGGAGACGCCCCCCTATCGGAGAGGCCATCCCTTAGGAGGAGAGGGCTATCAACG AGATGAAGCCGCCTCACGGTTCTACATGTGTGACCCTATTAAATTATATTTCTTATTTTGAAATGCTTTCATATTATCGA CATGATTTTTATTCAGTTTCATTGAAATGGTTATTTAAAAACTTGACAGTTTGATCATCTCTTATTTGAAATGATTCTTA TTAATATTATATATATTATACACTCTGATCTGATAGTGAAAAACTCGTGCTTCATATGTTTCCCCTTTCCTGTTCATGGT GGTTGTTAAATCCTCACTAAGTCTTTGTGACTTACCCCTTTATTATTTTATCCACAGATTATTCAGCAGCTGAGTAACAA GCTGTTCCTGGATTCAGATTGTCAGTTGTCTTGCTGGTAGGCCTCCATCGGCTGGTGGCCTCATTGCTATTTTATTTCTT TTGATTCTAGTTATCTGCAGCTATAGGGAGTCATAGGTGAATTTAGTTTGGGGTTGACGGTATCTTTTAATTTTAAAGGT TGACGTTGAGCGTCGAATTTTGGTTTTGTACCTTTTCTTGAAATTTTGGATTTGGAGAATATTATTTAGCAGGTTATGTT ATTTTGAGATTACTGAAATACAAAGGAAACTCTGTCGTTTTTTTTTTATAAATTTATGCGGACGTATTTATCATGGTGAA TTGGTTATAAATGTATTATGGGTAAAAGGCTTGCCGGACTTGGGGTGATAGTCCGTGCGCCGGTCGCGGCTTGAGATTTT TTTGGGTCGTGACATTTGTGATCAGAAATATTTTTAATTTCGTTTTTTGTTTTAAATTTGAACAATTCAATTTGTTTAAC TTTCTTGTAGTCTTGTGTCTGAATAGTCAACACTCAAATGAGAACAAAGAACATATCACTATTTATAAATCCCCCAGTTG AATTTTCATATGTCTGAACTTTAATCTATCAAATACCAAAATGGGCAGTCATATTATCAAAGGTTTGCTTGCTACATTGT TGCTCTTCTTGCACGCTGAAGCATCTGTTCATGAATTCAACCGGGCAAGCAAGGGCTCATCTGTGAAATGTCATGAGAGC GAGAAACAATCACTCCTCAACTTCAAACAAGGTCTCCTGGATTACTTTGGCATGCTGTCTACGTGGAGGGATGACGAAGA TAACAGAGATTGTTGCCATTGGAGAGGAATAACATGCAACAATGAAACTGGTCATGTAATGGTGCTTGATCTCCATGGTG GTTATTGGGTAGCACCGCGTTTGAGAGGTGAAACAATATTACTTCATTGATTGAGTTGCAAAATTTGGAATATTTTGATC TCAGTTAGAATAGTTTCCATGGTAGTCAAATCTCAAAACACATTGGCTACTTCACCAACTTAAGATTTCTCAATCTGTCA TATTCATATTTTGGTGGGAGGATTCCATATGAACTAGGACATCTCTCAAAGCTGGAGTATCTTAGTCTTGAAGGAAACTC CCTAGTTGGAGCAATCCCTTCTCAACTTGGGAACTGTACAAGTTTACGACATCTTGATCTAAGTGCAAATTTTGATATTT TTGGAGAAATTCCTTACCAACTTGGAAATCTCTCACAACTGCAGTTTCTTGATCTTTCAACAACTACACTCTCTGGAGTG ATCCCTTTTCATATTGGGAATCTTCCCATGTTGCATACTCTCAAGCTTGATGGAAGTTTTGATTTCACAATTGATGATGA AGCAACAAAGTGGTTGTCTTCACTCTCTTCATTAAAAAGTCTTCACTTGACCTCATTTCCTAACCTTGGCTCCTCACTTT ACTGGTTGCAGACAACGAGTAAGCTTATTCCAAACTTAAGAGAGTTGAGGCTAGTTGGTTGTGGTCTTTCGGATAATAAT ATTTTATCTTTGTTTCATTCTCATGCTAACATTTCAATTTCTCTCACCATCCTTGATCTCTCGGATAATATGCTGACATC CTCAACTTTTCATTTCTTGGTCAATTATAGCCTTAAATCTTCAAGAGCTGTATCTTTCTCATAACAATATGGCTATGTCA TCCTCTTTCTACTCTCCAAACTATGCTGCTCTTGTTAAGCTTGATCTCTCTTATAATAATTTGAGTTCATCATCATTTCA TAGTATTTTCAACTTCAGCTCAAAAATACGAGAGATTTATCTCAGAAATTGCACTCTCATGGATAGAAGTTTTCTTGTAT CACCGGCTTTCACTGTGAACTCTTCATCCTCTCTTCTCATCCTTGATCTCTCCTCTAATTTCTTGAAATCTTCTGTTATA TTTCATTTCCTTTTTAACTTCACCACCAGTCTTCGTAGTCTCGATCTTGGTGAAAATTGGATAGAAGGTCCACTTCCAGA TGGATTTGGGAAAGTATTGAACTCTCTTGAATTTCTAAATATCGCTTCTAACCAACTGCAAGGCAAGATTCCAGTTTACC TTGGAAATATATGTACACTGCGAGAATTATACCTTCGCAAAAACAACTTTAGTGGAGATATTCCAAACATCTTTCAAAAT TCTACCAGGGGCAACATGTATAAGTTTCAGTATTTGGATTTATCTGACAACTGGATTACTGGCATGCTACCCAATCTTTC AACTTTTCCATCTCTTAGGAAATTGGATCTTTCCAATAACAAGTTAACTGGAGAAATACCTAAAAGCATTGGATTGCTAC ATGAGTTGGAGTCTCTGCACCTAGAGGGGAATTACTTAGGTGGCGACATCATGGAATCATATTTCACTAATTTGTTCATG TTGAAAGAATTGGACTTAACAGACAACCCATTGTCTCTGAATTTCAGTACTAGTTGGGTTCCACCTTTTCATTTATATAA TTTGGGACTTGCATCTTGCAGGTTAGGTCCTAGTTTCCCAAATTGGCTCCAAACTCAAAGTCACTTGAGCTTTCTAGATA TTTCTAATGCTGAGATTAATGATTGTGTACCAGATTGGTTTTGGAGCAAACTACAATCAATTACTACGATGAACATGTCC CACAATGGTTTCACTGGTACTATTCCAAATTTACCACTCGAGCTTGCTAGTGATGATGATGATGTATTTTTAATTTTGAA TTCAAACCAGTTTGAAGGTGGAATTCCAGCATTTATGTCACAAGCATTTGCACTGGATCTCTCCAAAAATAAGATTTCAG AATTGAATACATTCTTGTGTGGCATGAGAGCAAATACAAACATGAGAACTTTGGATTTGTCAAACAATCAAATAGCAGAG CAGCTGCCTAATTGCTGGGAACATCTAAACTCATTAAAATGTGTTGATGTAAGTGGTAATAAGTTGTCAGGAATGATTCC ACAGTCCATGGGCACCCTTATTATTTTGGAAGCTTTGGTTTTACGAAACAACAGTTTAGTTGGGGGACTACCTTCCACTT TGAGAAATTGCACCAGATTAGTTGTACTAGACGTGGGTGAAAATTTATTATCTGGACCAATACCCAAATGGATTGGTGAA AGTCTACAGCAATTGAAAATTTTGAGCCTGCGAGTAAATCATTTCATTGGAAGTCTTCCATTATCTCTTTGTTATTTGCA ACAGATTCAAGTCTTGGACCTTTCAAGGAATAACTTATTCCAAGGGATTCCGACATGTCTGAAGAATTTTACTTCCATGG TTGAAAGGAGTACAATCTCAAGTGAAATTGTAAAGGGAAGAAAAATATCATCTACAGATACTTACTATGATGTTTATGAC TCTAATGTGTTATTGATGTGGAAAAGTACAGAGTATGTGTTTTGGGATCCAGAGATTCTGAGGAGCATTGATCTCTCAAG CAACAATTTGACAAGTGAAATACCAAAAGAGGTTGTATGTTTAATTGGATTAGTTTCTCTGAATTTATCACGAAACAATC TGAGTGGAGAGATCCCTTTTGAGATTGGGAATTTAACTTCTCTTGATTTTCTTGACATGTCAAGAAATGGTTTACATGGC AAAATTCCTTCATCTCTTTCAAAAATTGATCGTCTAGCAAAACTAGACTTGTCACACAACTTGCTCTATGGAAGAATCCC ATCTGGAACACAGTTGCAGAGCTTTGATGGTTCTAGTTTTGAAGGGAATCTTGATCTTTGTGGTGAGCCAGTGAACAAAA CTTGTCCAAGTGATAAGACCAAAGTGAAGCCTGAAGGAGTAGCAGATCATGATGATGGTGATAATTCAGTTTTCTATGAA GCATTGTACAAGAGCTTGGGCATAGGATTCTTCACAGGATTTTGGGGCTTGATTGGGCCTATACTCATATGGAGACCTTG GAGAATTTCTTACCTGAGGTTCTTGAACAGATTGATAGACTATGTATATGTCATGGTTACAGTGAATGTGGCACAGGTGG CTAAAAGGATAGCAGGTACGTTATTTTACGAACTTGTTTAATTTACTCCGTGTTCATAGTGCTTTTTTCATCTGTCCCAG TTATATAAATCAATAATCTCTTCTGTCATGGGAAGGGAGAATTCTAGGTACAATAATTGTTTTTTCATCTGCTTTTTTCT TTGGTTCATACCTCTAATAATTGTAGTTATTTCTCGAAAGATTATTTTCTGCATGTTAAGAAATTCCAGTTAACATGTTT AATTTAGAGAAGTTTTGTTCTCATATAACTTCTCTATAGTTCAGACCTCTTAAAATGTGTTTGCATTAGTCTACTTTTCT GTACTTCAATAGTTAGATCTATGTCAACTAATTTGTTAGATACCCCTGATTTTTTTGTACTCTATAGTTTCAACTCCTTA TGACTCCCTCTCTCTCACACATACACACACACTGCAACTATTGGCTTTTGTCAATTTCTCAACCATGTTAAGTCACTTAA GCTTAATTAGAGTGTATCTTCTTTTTTCCTTGGTTCAATCTTCTTTTTTCTTTGTCTCAGATGACTTCTCTATTGTTTAG ACCTCTTAAAATGTGCTTGTACTTATATCTTTTCCGTACTCCAATGGCTAGCTTCATGTCAATTTGTTTATCACTGAAGT ATTTTTCTCTTTTTCTGCATCACGTGTCTGTATTCTGAATTGTACCATGAAATTTGCAGTTTTTATTTTTTCTTTTGCAG ATTATTAGCTACACATTTCTGATGTGGGATGAAAGAATAATGGGTTGCTGGAAAGTTTAAGAAACTTAGATTTGATGTAT CCGATATAAGATCTTTAGTAGATCATATGTTTAAAATAATGACTTGTAGAGTCACTGTTGAAAGAAACTTATTGGCCTGG CAGTCCTTTATTATGTAGCATTTGTCATGTATTTTATTTTCTTCTTAAGCTAAGAAGACTATATCTAAAATGTAACATTT TAATTCCATCTTGAATAATCTTTCGTGTTAGTTTCTTGCCACATG
CDS sequence (LotjaGi2g1v0135100.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACATGTCCCACAATGGTTTCACTGGTACTATTCCAAATTTACCACTCGAGCTTGCTAGTGATGATGATGATGTATT TTTAATTTTGAATTCAAACCAGTTTGAAGGTGGAATTCCAGCATTTATGTCACAAGCATTTGCACTGGATCTCTCCAAAA ATAAGATTTCAGAATTGAATACATTCTTGTGTGGCATGAGAGCAAATACAAACATGAGAACTTTGGATTTGTCAAACAAT CAAATAGCAGAGCAGCTGCCTAATTGCTGGGAACATCTAAACTCATTAAAATGTGTTGATGTAAGTGGTAATAAGTTGTC AGGAATGATTCCACAGTCCATGGGCACCCTTATTATTTTGGAAGCTTTGGTTTTACGAAACAACAGTTTAGTTGGGGGAC TACCTTCCACTTTGAGAAATTGCACCAGATTAGTTGTACTAGACGTGGGTGAAAATTTATTATCTGGACCAATACCCAAA TGGATTGGTGAAAGTCTACAGCAATTGAAAATTTTGAGCCTGCGAGTAAATCATTTCATTGGAAGTCTTCCATTATCTCT TTGTTATTTGCAACAGATTCAAGTCTTGGACCTTTCAAGGAATAACTTATTCCAAGGGATTCCGACATGTCTGAAGAATT TTACTTCCATGGTTGAAAGGAGTACAATCTCAAGTGAAATTGTAAAGGGAAGAAAAATATCATCTACAGATACTTACTAT GATGTTTATGACTCTAATGTGTTATTGATGTGGAAAAGTACAGAGTATGTGTTTTGGGATCCAGAGATTCTGAGGAGCAT TGATCTCTCAAGCAACAATTTGACAAGTGAAATACCAAAAGAGGTTGTATGTTTAATTGGATTAGTTTCTCTGAATTTAT CACGAAACAATCTGAGTGGAGAGATCCCTTTTGAGATTGGGAATTTAACTTCTCTTGATTTTCTTGACATGTCAAGAAAT GGTTTACATGGCAAAATTCCTTCATCTCTTTCAAAAATTGATCGTCTAGCAAAACTAGACTTGTCACACAACTTGCTCTA TGGAAGAATCCCATCTGGAACACAGTTGCAGAGCTTTGATGGTTCTAGTTTTGAAGGGAATCTTGATCTTTGTGGTGAGC CAGTGAACAAAACTTGTCCAAGTGATAAGACCAAAGTGAAGCCTGAAGGAGTAGCAGATCATGATGATGGTGATAATTCA GTTTTCTATGAAGCATTGTACAAGAGCTTGGGCATAGGATTCTTCACAGGATTTTGGGGCTTGATTGGGCCTATACTCAT ATGGAGACCTTGGAGAATTTCTTACCTGAGGTTCTTGAACAGATTGATAGACTATGTATATGTCATGGTTACAGTGAATG TGGCACAGGTGGCTAAAAGGATAGCAGATTATTAG
Protein sequence (LotjaGi2g1v0135100.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNMSHNGFTGTIPNLPLELASDDDDVFLILNSNQFEGGIPAFMSQAFALDLSKNKISELNTFLCGMRANTNMRTLDLSNN QIAEQLPNCWEHLNSLKCVDVSGNKLSGMIPQSMGTLIILEALVLRNNSLVGGLPSTLRNCTRLVVLDVGENLLSGPIPK WIGESLQQLKILSLRVNHFIGSLPLSLCYLQQIQVLDLSRNNLFQGIPTCLKNFTSMVERSTISSEIVKGRKISSTDTYY DVYDSNVLLMWKSTEYVFWDPEILRSIDLSSNNLTSEIPKEVVCLIGLVSLNLSRNNLSGEIPFEIGNLTSLDFLDMSRN GLHGKIPSSLSKIDRLAKLDLSHNLLYGRIPSGTQLQSFDGSSFEGNLDLCGEPVNKTCPSDKTKVKPEGVADHDDGDNS VFYEALYKSLGIGFFTGFWGLIGPILIWRPWRISYLRFLNRLIDYVYVMVTVNVAQVAKRIADY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 409 | 409 | - | – | |
| PANTHER | 20 | 421 | 402 | 4.4E-115 | – | |
| PANTHER | 20 | 421 | 402 | 4.4E-115 | – | |
| SUPERFAMILY | 26 | 217 | 192 | 3.15E-34 | – | |
| Pfam | 69 | 82 | 14 | 0.12 | ||
| SUPERFAMILY | 167 | 374 | 208 | 5.24E-25 | – | |
| Pfam | 193 | 214 | 22 | 0.068 | ||
| TMHMM | 409 | 431 | 23 | - | – | |
| Phobius | 410 | 428 | 19 | - | – | |
| Phobius | 429 | 464 | 36 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0135100.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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