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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0135300 |
| Transcript ID | LotjaGi2g1v0135300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like protein kinase family protein; TAIR: AT2G34930.1 disease resistance family protein / LRR family protein; Swiss-Prot: sp|Q9C9H7|RLP12_ARATH Receptor-like protein 12; TrEMBL-Plants: tr|A0A0B2SGV6|A0A0B2SGV6_GLYSO LRR receptor-like serine/threonine-protein kinase GSO2; Found in the gene: LotjaGi2g1v0135300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:49403255..49406240) extracted from Lotus japonicus Gifu genome v1.2.
GGGTTGTTGTATGAGTTGGAGTTTCTACACTTGGAGGAGAATTACTTGGGGGGTGATATCATGGAATCACATTTCACTAA CTTGTTCAACTTGTTAGACTTGGACTTATCAGACAACCCATTGTCTTTGAAAGTTGGTACTAGCTGGGTTCCGCCTTTTC AGTTATTAAGATTGAGACTAGCGTCTTTCAAGTTGGGTCCAAGTTTCCCAAGTTGGCTCCAGAATCAAAGACATTTAAGG TTTCTAGACATTTCTAATGCTGGGATTAATGATTCTGTACCAAATTGGTTTTGGAGCAAATTACAATCAATAACTGAGAT GAACATGTCTCACAATGGTCTCATAGGTACAATTCCAAATTTACCAATCAAACTTGCTAGCCAATGGCGCATATATATTA TGAATTCAAACCAGTTTGAAGGTGGAATTCCTGCTTTTTGGTCACAAGCATTAGTACTGGATCTCTCCAAAAATAAGATT TCAGATATGACAACATTCTTGTGTGGTATGCGCGCAAATAGGCACATGGAAATTTTGGATTTATCAAACAATCAAATAGC AGGACACCTCTCTGATTGCTGGGAATCACTAAACTCGTTAAAATTTCTTGATTTAGGTGATAATAAATTTTCAGGGAAGA TTCCAAAGTCCATGGGCACCCTTGCTAATTTGGAAGTTTTGGTTTTACGAAACAACGGTTTAGTTGGAGAACTACCTTTG AGTTTGAAGAACTGCACCAGATTAGTGGTACTAGACGTGGGTGAAAATTTATTGTCTGGTCCAATACCCAAATGGATTGG AGAAAGTCTACCACAATTGAAAATCTTGAGTCTGCGAGTAAATAACTTCTTTGGAAGTTTTCCTTCATATCTTTGTTATT TGAGACAGATTCATCTCTTGGACCTATCAAGGAACAACTTATCCAAATGCATTCCATCATGTCTGCAGAATTTTACTGCA ATGATTGATAGGAATACAATCCCAAGTCCTGTAAGTGGAAGAATATTATCATCTGGAGCACTTATCTCTGATATTTATGA GTCTAATGTGCTACTAGTGTGGAAAGGTGCAGAGCGAGTGTACTGGAATCCAGATAATCTCCTAAAGAGCATAGATCTCT CAGGCAACAATTTAACAGGTGAAATACCTAAAGAGGTTGGATATTTGCTTGGATTGGTTTCTTTGAATTTATCAAGAAAC AACTTGAGTGGAAAAATCCCTTTTGAGATTGGGAATTTAACCTCTCTTGATTTTCTAGACTTGTCAAGAAATCGTTTACA TGGAAAAATTCCTTCATCTCTTTCTCAAATTGATCGTCTAGCAAAATTAGATTTGTCACACAACTTGCTCTATGGAAGAA TCCCTTCTGGAAGACAGTTGCAGACCTTTGATGGCTCGAGTTTTGAAGGAAATGTTGATCTTTGTGGTGAGCTACTAAAC AAAACTTGTCCAAGTGATGAGACCAAAGTAAAGCATCAAGGAGTAGCATATGATGATGATGGTGCTAATTCAGATTTCTA TGAAGCATTGTACATGAGCATGGGCATAGGATTCTTCACAGGATTTTGCGGCTTGATTGGGTCAATACTCATATGGAGAC CTTGGAGAATAGCTTACTGGAGGTTCATGAACAGAATGATAGATTGCAGGATTTTGTGGCACTTTGTCATGGTTGCAGTG AATGTGACAAAGTGCCACAAGTGGCTAAAAGAATAGCAGGTAGCAGGTGCCTTATTTTAAGAACTTTTTTAATTAATTTA TTTCATGCTGATAGTGCTTTTTTCACCTGTTGCAGTTATATATAATTTCTATTAATAAGGATAGGGAGAATTTCTTTTTT TAAAACAATTGCTTAACTTGGCATAAATATAATTTTTAAAATTTCCTTGTTAAATTCTTCATCCAAGATAATCCTAATTC CTTCACAAACACTTACATTAAGTTCTCCTCCTTGTTAGCCCACTTAATCTGAGTTATACTATTTGAGTGTGTCAGTTTTG TCTTATTATTTAGAGTTTCGACCATGCCTTTGATAGTTGTTGATAGTTCACCAGCGAAAGATTGTTTACTTCTGGGATGT TTAATTTGGAGGGAAATCTTGTTTTGAGATGTTTAAATGGTAGTTAATCGCACTTTTAGTCCCCTACGAAAGCGTTATGT GTCATCTAGGTCCCTAAACTTTAAAAATCCAGTAACGCAATCCCCAACATTAATCTTCGTTAACAACTTTGGTCCATCCC CTCTTTTCCATCAAAAAAACTAACGGTTTTGGGGACCAAAAGTGCAATTAAGCTAAATCAAAAAAAAATTATCTAGAAAC ATTGATATTGTTCTACATCTTCATCAATCGTCAATAAAAAAAACCCATAAACCCAAAAAATCTAAGAAATTCTAAACTAA AATAAAACCCAAAATACCCACACTTTCTCCCCTCCATCAATTAAGACCTAAACTGTGTTGAAACCAAAAATTACACATAC AATTTTCTCTCCCCCAACCAAATAATATACATTTGAAATCATCCCTGTCAAAACACAAACACGTTTGAGTGTGTCAGTTT CGCCTTATTATTTAGAGTTTAGACCATGCCTCTGATAATTGTTGATAGTTTACCAGGGAAAGATTGTTTACTTCTGGGAT GTTTTTTTTTTTTTGAAATGACTTCTGGGATGTTTAATTTGGAGGGAAATCTTGTTTTGAGATGTTTAAATGGTTAATCT TCTTAAGAAGCTCTAATTTTATTTTTATTTGTCCATCTCAATTAATGTTTGCAATCTGACATGTACCATGAAATTTGCAA TTTATTTGCAGATAAGCTCTAGTGTTCAGTTCTGGGATGAAAGAAACATCTGTGGCTGAAAAAGTCTTTAAGATATGTAA TAATGTAGTAATATGATATTAGATCTGACAAATTATATGTTTGAAATAATGATTGAAGGAATTTCTTAGTTTGATAGTCT TTAATTAATCATGTCATATTTGTAAT
CDS sequence (LotjaGi2g1v0135300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAATCACATTTCACTAACTTGTTCAACTTGTTAGACTTGGACTTATCAGACAACCCATTGTCTTTGAAAGTTGGTAC TAGCTGGGTTCCGCCTTTTCAGTTATTAAGATTGAGACTAGCGTCTTTCAAGTTGGGTCCAAGTTTCCCAAGTTGGCTCC AGAATCAAAGACATTTAAGGTTTCTAGACATTTCTAATGCTGGGATTAATGATTCTGTACCAAATTGGTTTTGGAGCAAA TTACAATCAATAACTGAGATGAACATGTCTCACAATGGTCTCATAGGTACAATTCCAAATTTACCAATCAAACTTGCTAG CCAATGGCGCATATATATTATGAATTCAAACCAGTTTGAAGGTGGAATTCCTGCTTTTTGGTCACAAGCATTAGTACTGG ATCTCTCCAAAAATAAGATTTCAGATATGACAACATTCTTGTGTGGTATGCGCGCAAATAGGCACATGGAAATTTTGGAT TTATCAAACAATCAAATAGCAGGACACCTCTCTGATTGCTGGGAATCACTAAACTCGTTAAAATTTCTTGATTTAGGTGA TAATAAATTTTCAGGGAAGATTCCAAAGTCCATGGGCACCCTTGCTAATTTGGAAGTTTTGGTTTTACGAAACAACGGTT TAGTTGGAGAACTACCTTTGAGTTTGAAGAACTGCACCAGATTAGTGGTACTAGACGTGGGTGAAAATTTATTGTCTGGT CCAATACCCAAATGGATTGGAGAAAGTCTACCACAATTGAAAATCTTGAGTCTGCGAGTAAATAACTTCTTTGGAAGTTT TCCTTCATATCTTTGTTATTTGAGACAGATTCATCTCTTGGACCTATCAAGGAACAACTTATCCAAATGCATTCCATCAT GTCTGCAGAATTTTACTGCAATGATTGATAGGAATACAATCCCAAGTCCTGTAAGTGGAAGAATATTATCATCTGGAGCA CTTATCTCTGATATTTATGAGTCTAATGTGCTACTAGTGTGGAAAGGTGCAGAGCGAGTGTACTGGAATCCAGATAATCT CCTAAAGAGCATAGATCTCTCAGGCAACAATTTAACAGGTGAAATACCTAAAGAGGTTGGATATTTGCTTGGATTGGTTT CTTTGAATTTATCAAGAAACAACTTGAGTGGAAAAATCCCTTTTGAGATTGGGAATTTAACCTCTCTTGATTTTCTAGAC TTGTCAAGAAATCGTTTACATGGAAAAATTCCTTCATCTCTTTCTCAAATTGATCGTCTAGCAAAATTAGATTTGTCACA CAACTTGCTCTATGGAAGAATCCCTTCTGGAAGACAGTTGCAGACCTTTGATGGCTCGAGTTTTGAAGGAAATGTTGATC TTTGTGGTGAGCTACTAAACAAAACTTGTCCAAGTGATGAGACCAAAGTAAAGCATCAAGGAGTAGCATATGATGATGAT GGTGCTAATTCAGATTTCTATGAAGCATTGTACATGAGCATGGGCATAGGATTCTTCACAGGATTTTGCGGCTTGATTGG GTCAATACTCATATGGAGACCTTGGAGAATAGCTTACTGGAGGTTCATGAACAGAATGATAGATTGCAGGATTTTGTGGC ACTTTGTCATGGTTGCAGTGAATGTGACAAAGTGCCACAAGTGGCTAAAAGAATAG
Protein sequence (LotjaGi2g1v0135300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESHFTNLFNLLDLDLSDNPLSLKVGTSWVPPFQLLRLRLASFKLGPSFPSWLQNQRHLRFLDISNAGINDSVPNWFWSK LQSITEMNMSHNGLIGTIPNLPIKLASQWRIYIMNSNQFEGGIPAFWSQALVLDLSKNKISDMTTFLCGMRANRHMEILD LSNNQIAGHLSDCWESLNSLKFLDLGDNKFSGKIPKSMGTLANLEVLVLRNNGLVGELPLSLKNCTRLVVLDVGENLLSG PIPKWIGESLPQLKILSLRVNNFFGSFPSYLCYLRQIHLLDLSRNNLSKCIPSCLQNFTAMIDRNTIPSPVSGRILSSGA LISDIYESNVLLVWKGAERVYWNPDNLLKSIDLSGNNLTGEIPKEVGYLLGLVSLNLSRNNLSGKIPFEIGNLTSLDFLD LSRNRLHGKIPSSLSQIDRLAKLDLSHNLLYGRIPSGRQLQTFDGSSFEGNVDLCGELLNKTCPSDETKVKHQGVAYDDD GANSDFYEALYMSMGIGFFTGFCGLIGSILIWRPWRIAYWRFMNRMIDCRILWHFVMVAVNVTKCHKWLKE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 466 | 466 | 7.4E-113 | ||
| Phobius | 1 | 488 | 488 | - | – | |
| SUPERFAMILY | 3 | 145 | 143 | 1.51E-16 | – | |
| PANTHER | 13 | 505 | 493 | 8.5E-126 | – | |
| PANTHER | 13 | 505 | 493 | 8.5E-126 | – | |
| SUPERFAMILY | 128 | 456 | 329 | 4.93E-56 | – | |
| Pfam | 154 | 214 | 61 | 2.0E-6 | ||
| PRINTS | 348 | 361 | 14 | 1.8E-5 | – | |
| Pfam | 348 | 406 | 59 | 2.2E-7 | ||
| PRINTS | 393 | 406 | 14 | 1.8E-5 | – | |
| Phobius | 489 | 511 | 23 | - | – | |
| TMHMM | 490 | 512 | 23 | - | – | |
| Phobius | 512 | 530 | 19 | - | – | |
| Phobius | 531 | 549 | 19 | - | – | |
| Phobius | 550 | 551 | 2 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0135300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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