Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi2g1v0138800 |
Transcript ID | LotjaGi2g1v0138800.1 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | SPX domain-containing family protein; TAIR: AT4G22990.1 Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein; Swiss-Prot: sp|Q93ZQ5|SPXM3_ARATH SPX domain-containing membrane protein At4g22990; TrEMBL-Plants: tr|A0A1J7GX73|A0A1J7GX73_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0138800 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:50794772..50803946) extracted from Lotus japonicus Gifu genome v1.2.
ATTGAAAATCAAAACTTACCTTTTGAATGTAATGGAATGGGTCTTTGAGGGAGCTTTGATGATGATTAGAACCGAGCTTT GAGGGAGATTGAAGTGGTGGAACCGGATTTTGGGAGAGATTGAAGAGGGTGCGATTTGGAGAGGAAAATTTGGGTTTTAA AATAATGGGTTTCAAAACCCAAACTGTCGTGTTTATATGTTTTAAACACGATCGGTAAATGATTACCCATTATAGTGTCG GGTAATCATTTACCGTTATTAATCAACTGGTTTTCTGGTAATTTCGCCCCTTCAGGTGGGGCGTGGGGCCTAATGGGTGG GGTGTTAAACCCAAAGCCCTTGAAATCATGGTTAAAATAAAAAAAATAAAAAAGTGACAGTGATACCTCGATACTCATAG TAACAGATGACACCCTACAAAAAAGGTGAATCTGCAACTGAATCTGTTTCTCTCTCATCTCTTCTCTCCCCTTCTCTTCT CCTCCGGGTTGCATTTCTACAGGCCGTTTTTGCTTTTCTTCCCAATCATTTTCTCTCTTGAATAATAAATGTCAATAACA ATAATTTACCCATTCTGATTCGCTTTTGAATGATTGATTAGTGAAATTCACTACGGTAAGTCTTTTTGTTATATTTATTA TTATAATTTTTGTTTGCATCCCGCCGTGTTTATCTTGTTCTGATTGATTGCCGCTCTGTCTTTTCTGTCTGTTTTCTGAG ATTCTTCCAGAAAAAATCGAAAAGGGGATACACTGAGATCCTGTTTTCTGTTCTCAGCTGGAAACCACTGAACCGAGGTA TGGCTGTTCCATTTCAATCTCAATTTTGAATATGTGGCCCTGGTTTTGCGTGAATTTGTTATCTTTATTTTTCTTGATGG ACATGGTTGAATTTTTCTGCGTATTTTGGTATGTTTGTTTGTTCTATCAATTTTCAAATATTTGTGATGGTAGCATGTCT TTGAGATATGAATATCAAATTGGGTTTGCTGATTCATAAATTGGAGTTGCTTTAGCTGGTTAGGATCTAAACACTTGGAA GCTTTTTTTTATCTAATTGTTAGGCAATAGGTAAGTACCGTTGAAAGTGTTCGTTGGTTGATACGTGTTTATATATGCCT TCGATTAACAATCAGGTTCTGTTTTGCATGCTTTGATTAGTTCAATTTGAACTGAACTTGTTATGAAGTGCATGGTTTTG GTTTTGATGAAACAAGGTAGACAGTCAAATTTAAATTGGCTGATTTAGTTCATTTTTCAGTGTGTACTATTGCAGAAAGA GATGGTTAACTTTGGGAAAAAGTTGAAAGACAGGCAAATTCAAGAATGGCAAGGGTATGTAAGTCTGCCCTTGTGTTGTT GAGGGTTTATAAATTTCATTTTTGAAGATTAGTTCAGCTGTAATGGTACTTTTTGTTCATATGTTTGATTTTTGGTTATA GATATTACATAAACTACAAACTCATGAAGAAACGAGTGAGGCAATATGCTCAACAGATTCAACTTGGTACACAAGATCGG AGGCATGTACTCAAGGATTTCTCACGGATGCTGGATAGTCAGGTTTTGCTGTTTTCTTCGTTGAATGCGTTATCATGTCA TATTAAATGATGATTGGACCTTTCCATTATATTGAGCTCAAATTAGATTCGGGTTATATCAGTAGATGTGATTATCTATG TATAATGAATCTTAACATGTCGAATAGTTTTTGTTACAGAATGAGGTATCTTTTGTTTTATATTTGTTTCAATAACTTTC CTTTTGTTGCAATTCAGATTGAGAAAATTGTCCTGTTCCTGTTGGAGCAACAAGGGATTTTGGCAAGCAGGATAGAAAAG CTTGTGGAGCAGCATGATGCTCTGCAGCAGGAACCTGAAATAAACAAAATAAATGGATTACGAGAAGCTTATAGAACAGT GGGACAAGATCTATTAAAGCTTCTCTATTTTGTTGAGATCAATGCTGTTGGCTTGCGAAAGATATTGAAGAAGTTTGACA AACGCTTTGGCTATAGATTCACTGATTACTATGTTAAAACTCGTGCAAATCATCCTTACTCCCAGCTACAACAAGTGTTC AAGCATGTGGTAATATGCTTATTTCAGATGAATTTCCACGGATATATTATTTTAATTGTCATGAACCAAATATCCTAAAA ACTTAAACAGGCAAGTAAAGGCACATGAATGATTTTGTATTATATATTCTAACACACCGTCTCACGCAAGAATCCATTGG GCTAGAATTGTGGACATCGCACAAGTCCACCTATCTTGGGCTGAAATTCAACTTTTTATTAGAATATTGGGAAGCAACCA GGATAGAACTCTATGCCCTTTAGTGATACAAGCTCTGATACCATATTATTAACAAATTATCCCAAAAGATTAAGCTGGTG GCTGTAGATACATGAATGATTTTATATTATATTTTCAATATTAATAAATGAACATTGACTTATGAATATGGAATTTGCAG GGACTAGGTGCTGTTGTGGGAGCCTTATCTCGCAATCTTCATGATCTTCAGGACCGACAAGGAAGCTACTTATCAATTTA TGATCAGCCTTCTCTTCCCCTCCAGGTTTCTTCTGCGTTTACTTTTCTCCATCATAGGCTTAGTTTGTTTAGTTATGTTT TCTCTTAATGCTGTAATGCATGCTGTAATAGCTGGTTAGGGTGCAGAGCAAGGTTGGTGGTAATTTTCCAACTTGGTTTT ATATGTAGGATCCTGTTATTGATTCAATAAATGCAGCTGTTGATAGGTTAACCCACTCAACAAACTTTCTTAACTTTTTG GCACAACATGCACTCATTATGCAAGAAGATCTGCCTGCCCCTACTGAGGAACCTGTTGATGATAAAAGATACCATTTTAT GTCTCTTCTCCTCAACTTGGCAAACACATTTTTGTATATGGTCAATACATATATTATTGTCCCTACAGCAGATGATTACT CTACGAGCCTTGGCGCCGCACCGACAGTGTGTGGTATTGTGATTGGGGCAATGGCTGTTGCACAGGTGTTTTCATCTGTG TATTTTAGTGCGTGGTCAAACAAATCATACTTCAGGCCTCTTGTATTCAGTAGCATAGCTCTTTTTTTTGGGAATATCTT GTATGCACTGGCATATGATATTAGTTCGATATGGGTTCTCTTAATTGGTCGCCTTTTCTGTGGGTAAGCAATCTTCTATT TCTTAATTTTCTTCCTATCATCACTTTATGAGCATAACGTATCATACTGTGCCTTCAACCTTTTAATGGTAGATAAGTAT GATAACATCTCTTATTATAATTTTCATTAATTACAATAAGGTACCTTATAAAATCAACTCCAAGGAAATACAAGTCCTAA CTGGAAGTAAAAGAGGACCAAAAGTTGGTTTTGAAATAGGAATGTTAGTATGCAGTTATTGGTGCATGCAAATTAAGTTA TTTATATACCCTGATTACCATCATGCTACGGACAGTATGACATGATGGCCACAGTATGACCATTTCTGCTGATGAATACT TAATTAAATTACAGATTGGGATCTGCCAGAGCTGTTAACCGGCGTTACATTAGTGATTGTGTTCCATTAAGAATCCGCAT GCAAGCATCCGCAGGTTTTGTTAGTGCCAGCGCTCTTGGAATGGCATGCGGTCCTGCATTAGCTGGCATACTGCAAATTG ATTTTAAGCTTTATAAGCTTACATTTAATCAAAATACCCTGCCTGGTTGGGTGATGGCTGTTGCTTGGCTGATATATCTA GTGTGGTTGTGGATTACTTTTAAGGAACCTTCTCATGACACTGAAGAGAATCAGGGGCCACAACAGTCAAATGATGATGG TATTGGACTTATATTGCTTCAACATGCTACTTATTGTTTAAACATTTTTTATTATGTCCTTGTAAGATCATTAATATACA TGAGTCCTCTAATTTTACAGTTGTGTCCAAATATTCAATATCTAGACGAACATTTTGGTTCTGGAAGTTTTTGAGTTCAT TTTATTTTTTCTGAAAAAACACGAGTCTATATACCACACTGGTAGTAAATTTATTTTGATGAATTTTAAAATAAGTGAAA AAGTAGGGAAGAAAATGTTGCTATGTGAAGTAGGAACAAGTCATTGGACTTACAACAACAAAAAACTATTTTCCCACCGT TAAGTGGTAGTTGTTTGGATCAAATTGTGCCACTGTGTAGGTAAAAAACTAGGTTTCTGAGAGGCCACTTAGATCTAGGT CTTTATTTCTGGTTTATTTTCATACATCGTCCTGAATCTCTTACTTATTGGGTCTTTCATTTGTCTTCTCTTTAAATCTC CTGACCAAACCATTTTAGGTAAGATTATGTTTCAATAGGCACTACTCTCAAAGTGAAACATAATCTTTTGGCCATGACCA AACACCCATTTTCTCAAAATGAGTTGACCGGACTAAATCATTTGATTTTGACCATGATCAAACTCGCATTTTATTAAAAT GCTTGAACCCTATAGTTTACATCTTTTATTTTCCTGTCATTTTGTATGGTATACCTTATGGTATGCTGTAGTCCCCCTCT ATTTATCACTTTACTATTTATCGAAAGTCATCTATGATTATGTTATTATTTTATAATATAGTTTAATGCATCTTCTTTTC ATGAGTTTTATCATTATGTGAAGACTAACATAAAGTAACACTCTTTTTCTTTCTGTCAAGAAGAAAATAGTGCACTTGAA AATGGCCTAAAACAGCCATTGCTAATTGCCTCAAAGGATAAGGTAGATGAAGACGCTGACCAAGATTTTGATGAAAGTGA AGAAGCTCCAGAGGAATCTCGCGTACCTGCCAACTCAATTGGATCTGCATACAGACTCCTGACACCATCTGTAAAGGTTT GTGATAAACTCTTCGTCATCTATATGATATTGGATCTGTATCAAGCTGTAATGATTTCATTAGATGTAAAATTTTAAAAC CATTGTTGCTGTTTTGATGGAAACCTAATTTGTTGATGTGGAAGTGACACACATATGATTCTGTTTGACTATGAAAAACT TGTTATTTGTTGGAAATAATGAATGATAAATTAAAGGAATTAGACTGCTATTTGCATTTGCTCCTATACTTTTTTTTTTC TTCTTTTAATGGCTCCAATACTAGTGAACTGGGGAGATATATGCCAATTGCTAACTAGGAGAGGTGATCCTGTTCTATTG TGAAGTTTGGAATAGCTAATTTAAGTTAGGGTCATGAACATCATATAACTAGATTCCATCGGTACTTAATTAATTTGCTG ACACACTTGGACGCTATTCTGTAACATAATTTTTTTAAATATTATAAGAGCTCTTCATTTTTTTACTCTCAGTTGATGAG GAGTACTAGCGACATACTATTTTAAACACACTTGAGTGTGATTGGTCTATTTACATGAGAGTCAACATATTTCTCTCACT TATTAAATGTGTTAACTTTTTTAAAATGAAACCAATCACATTGAAGTGCATTTAAAAGAGTGTATTGCTAGCATTTCCCC TCAGTTGATTTTCCATAATCTGTACCCTTAATAATAAGTATTAATTTTTTTTACGTGGCATGAGAATTAACCAAAATATC ATTTGTTAATTTAAAGTTAATCTGCTTTCCACGACAGAAAAAAGATTATATTCAAGGTCTTATATGTCTTAATTTACAGA TTTATAGAAGATTATAGATTTATAAAGTTAGCAAGGTAGGTCATTTTAGAATATGATCAATCGGCTTAAATTGGTCTCCT GTTTTTGCATAAGATCAAATCTGAGCAAAGAGAATTGAAGTGGCTAGGGGATGACATGATGTTAAGTTGATTACTAGTCT CTTCAATGTGCAAAGGGAATGCATGAAATAGAGTTGATTGCTACTCTTACCTTTTAAAATCCATGATTTCCATTTGTTAA CTGAACCATAACATTCTGAAATAATTATACATCTTAGTCTATGATACTATACTTAGGTGTTTATACTACATATCTGTGGC TTTAGCATGTGTGACTCACCATTTAGAAGTGCTGGCTGTGCTGCTAATTTTCTAGAATGGGGATTTGCTCCTGTCATATA AGATGATTTGGACATATTCAGATGATGCATGTCTTTAATGATCTAGCTTATTAAAGAATATTTTTGGATATTTTAAGATT TCTTGAGATACTGTTTATTTGATATTAGAAATCATCTGTTCCAATGGTTGGTGGTGATTATATAAAGGCCCTGTTTGGAA AAACAGCTTAATTAAGCGCTTAGGGTCATAAGCGCTTATTCATAAGCTATTTTAAAAAAATTATTGAAATAAATTGAAAA TAAGCTATATATAAGCATAAGCTCTTTTTCATAAGCTATCCTGAGTAGCTTATGAAATAAGCTCAAAACAGCTTATGGTA GGCCATAAGCTGTTTGCATAAGCTCTCCCAAACACTGGCATAAGAGCTTATGCTATCAGATAAGCTCAAATAAGCTCTTC TAAACGGGACCAAAATGTTGGAAAGTTAAACGCTTTAACTGACCAAATTTGTGTAACATCTCCAGGTTCAGTTGCTGATA TATTTCATGCTCAAATATGTAATGGAGATTTTACTATCGGAATCTAGTGTCATCACAACGTACTACTTCAACTGGTCAAC AAGCACAGTTGCAGTTTTTCTTGCCTGCCTTGGTTTGACAGTTCTTCCTGTAAACATTATTGTGGGAAGCTATATAAGCA ACTTGTTCGAGGATCGGTAATAACTGAATAAAACCCATGCTTCATTTCATTCTTATCCACAATTGGGTTTATGCTCCAGT TTAATTTTCTCAAAAATGTATGATGAGACATAGTGCATGTGGATACTTAATAAAAAGAGAAGGAAAAAGAAAAGATCCTA TAGAGCCATGCTTCTTTGAAAAACCCATTTAGATCCTCAAAGACTTAAAGTTTTGGAAATACTTCCCATATCATCTGAGA CTTCATTTTCTTATCTGTTTTAGGCAAATTCTGTTGGCATCGGAAATCATGGTTTGCATTGGCGTTTTACTGAGCTTCAA TATAATCTTTCCATATACTGAGCCACAATACATATGTTCGGGTCTCCTTGTATTTGTTTCTGCTGAAGTACTTGAGGGTA AGATCTTTTTTTGCTTTACCTATGATGGTTATGTATCAGAATGTATTGTTTTTATTTTTGGAAGTCCAAATATATTAATA AAGAGGAAAGAGACTAAGCTCTGGAGTAGGATAATGGGGAACACAAAAACCAAAACCCCAACCATCCTCAAGAATACACA TACGCTTAATCAGAATGTATTGTTAAGGTGCAAAAGAAGCATTATTTTTTTTCCATTGAGTGAAAATAAGATATTTCAAT GATAAAACATATTTGTTAGCTTCAGCGTCATGAACGGCATTATGGCCAATAAAGAAATGAGTTATTTTTTAGTTTTGACA CGTTATGTTTGTTCTGTTAAATTCCTGAATGCCTTTGATGTTGTCCAGAATAATTTATAAGTATTCCCAGGAACGGTACT AGGAGTGTTATAAACCTGTTCTAACTTCTAAGTATTTAATATTCCCAGGACTTTTGGAAGTCCAGAATATCACATCTTTT TATGGGTTCCACCTTTCTGTTGTTTTTATGGGTTCCACCTTTCTGTTGTCATTTGGACCTGAGCTACATAAACCCTGATA ATACCCTTCTTTAGATTTTTTAATTATCAAGGTGTAAAAGAAGTGAGATCATATTCCCAATAATAACATTCTTGGAAATA TTAATATCCGGAATGTCATTGAAGGCAAAATTTAGTATAATTCTGTTTAGTAAGCATATAGTATTCCTAGGAATATTTCA AAATTTTATTCAGTTTCAAAACTAAAACTCAAAAATAGAAAAGGTATGATAGAATGTGGTAGGAGTGAGAAGTTATATTC AAAATACCTCATTGCAACAGGAACTAAATTAAATGAAGGGAATGATGGCAGTTATTATTTCCTTAGGAATAACTTATTTT TTTGGTACATCGGAAAATTAAACAGACAAGCAACAAAAACTACAAAGCTAACAAATCTCTAGCCAGAATCGGCTGAAGCT CTTGAGGAGGGCTCTCAAGACAAGTCAGGGGGCAAAGGAGGCTAGCTCCAAGTCCTGAAAGTTTTCAACCTTAAAACAAA CAAAAGGATATTCATTCCCTGCTTATATATTTCTGGAAAAGTGTTTCTATAACTTGAAAAAAATCCAAGAGTGATAGGGA CACAAAGTAGTTGTGTCCTTGATATCACAAGTGTCTATAATCAAAACAAGATTTAAAAGGGATTTCTTGTCATTACTGAT GTTATTCATTTTTATATTTTTGTTCTTCTGTACAAGACTGTAATTGATTTGTATGACCTGTTGCCTATTTATCATTCATT CCAGGTGTCAACTTGTCACTGCTTTCACGTGTCATGTCGTCAAGGCTTTCTCGTGGAACCTATAATGGTGGTCTTCTGTC TACAGAGGCTGGGACAATCGCTAGAGTGATTGCTGATGCAACTATTACCCTGGCTGGATTCGTGGGTGAGAGTAGGATCC TTAATGTCACCCTGCTGCCTTCACTCTTGATTACCATATGCTCTATTTTAGCAACCTGCTACACCTACAACTCTTTGTAC TGATTTCTGTTCTAAAGGTTTAGATGGAAAGAGGAGAATGCTCTTCTTCAACATGACTTTAGTCTCTTCTCCAAAAAGTT GGAGAAGTAGCTAGGCAAAACGTGAACTCTAAGCAAAATAGGTTTCTCAATTATCACTGTTATTTGTTACTTCGTTGTCT GTTGATAAATGGGACGTGTATTGCTCCTCTTGGTATGCATTTTACTTGATTAGGATTTAGGATCGATGTCACATGATATT GTTATGTGAAATTTTGTATCTTTCTCTTTTCTTAAATATTGAAAGGACCCACTTATTTTATAGATATGAAGAGAGATAGT CCCAAAGTTTCAACATGATACTGTCATGTGAAATCCGAAATCCATTTTATTCACTCAGGTTAGAGTTGTAAATGACCTGA GCTATTGTTAAGCCTTCATTTATTAAACTAGACTAAGATCCGCTCAATGCAATTTTGCATTAAAGTCTTGTACGTTTGTA AATTGCATACTTTTTCAAGTTTTTCAATGAAATGAATGAGTTTTTACTATGGAAT
CDS sequence (LotjaGi2g1v0138800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTAACTTTGGGAAAAAGTTGAAAGACAGGCAAATTCAAGAATGGCAAGGATATTACATAAACTACAAACTCATGAA GAAACGAGTGAGGCAATATGCTCAACAGATTCAACTTGGTACACAAGATCGGAGGCATGTACTCAAGGATTTCTCACGGA TGCTGGATAGTCAGATTGAGAAAATTGTCCTGTTCCTGTTGGAGCAACAAGGGATTTTGGCAAGCAGGATAGAAAAGCTT GTGGAGCAGCATGATGCTCTGCAGCAGGAACCTGAAATAAACAAAATAAATGGATTACGAGAAGCTTATAGAACAGTGGG ACAAGATCTATTAAAGCTTCTCTATTTTGTTGAGATCAATGCTGTTGGCTTGCGAAAGATATTGAAGAAGTTTGACAAAC GCTTTGGCTATAGATTCACTGATTACTATGTTAAAACTCGTGCAAATCATCCTTACTCCCAGCTACAACAAGTGTTCAAG CATGTGGGACTAGGTGCTGTTGTGGGAGCCTTATCTCGCAATCTTCATGATCTTCAGGACCGACAAGGAAGCTACTTATC AATTTATGATCAGCCTTCTCTTCCCCTCCAGGATCCTGTTATTGATTCAATAAATGCAGCTGTTGATAGGTTAACCCACT CAACAAACTTTCTTAACTTTTTGGCACAACATGCACTCATTATGCAAGAAGATCTGCCTGCCCCTACTGAGGAACCTGTT GATGATAAAAGATACCATTTTATGTCTCTTCTCCTCAACTTGGCAAACACATTTTTGTATATGGTCAATACATATATTAT TGTCCCTACAGCAGATGATTACTCTACGAGCCTTGGCGCCGCACCGACAGTGTGTGGTATTGTGATTGGGGCAATGGCTG TTGCACAGGTGTTTTCATCTGTGTATTTTAGTGCGTGGTCAAACAAATCATACTTCAGGCCTCTTGTATTCAGTAGCATA GCTCTTTTTTTTGGGAATATCTTGTATGCACTGGCATATGATATTAGTTCGATATGGGTTCTCTTAATTGGTCGCCTTTT CTGTGGATTGGGATCTGCCAGAGCTGTTAACCGGCGTTACATTAGTGATTGTGTTCCATTAAGAATCCGCATGCAAGCAT CCGCAGGTTTTGTTAGTGCCAGCGCTCTTGGAATGGCATGCGGTCCTGCATTAGCTGGCATACTGCAAATTGATTTTAAG CTTTATAAGCTTACATTTAATCAAAATACCCTGCCTGGTTGGGTGATGGCTGTTGCTTGGCTGATATATCTAGTGTGGTT GTGGATTACTTTTAAGGAACCTTCTCATGACACTGAAGAGAATCAGGGGCCACAACAGTCAAATGATGATGAAAATAGTG CACTTGAAAATGGCCTAAAACAGCCATTGCTAATTGCCTCAAAGGATAAGGTAGATGAAGACGCTGACCAAGATTTTGAT GAAAGTGAAGAAGCTCCAGAGGAATCTCGCGTACCTGCCAACTCAATTGGATCTGCATACAGACTCCTGACACCATCTGT AAAGGTTCAGTTGCTGATATATTTCATGCTCAAATATGTAATGGAGATTTTACTATCGGAATCTAGTGTCATCACAACGT ACTACTTCAACTGGTCAACAAGCACAGTTGCAGTTTTTCTTGCCTGCCTTGGTTTGACAGTTCTTCCTGTAAACATTATT GTGGGAAGCTATATAAGCAACTTGTTCGAGGATCGGCAAATTCTGTTGGCATCGGAAATCATGGTTTGCATTGGCGTTTT ACTGAGCTTCAATATAATCTTTCCATATACTGAGCCACAATACATATGTTCGGGTCTCCTTGTATTTGTTTCTGCTGAAG TACTTGAGGGTGTCAACTTGTCACTGCTTTCACGTGTCATGTCGTCAAGGCTTTCTCGTGGAACCTATAATGGTGGTCTT CTGTCTACAGAGGCTGGGACAATCGCTAGAGTGATTGCTGATGCAACTATTACCCTGGCTGGATTCGTGGGTGAGAGTAG GATCCTTAATGTCACCCTGCTGCCTTCACTCTTGATTACCATATGCTCTATTTTAGCAACCTGCTACACCTACAACTCTT TGTACTGA
Protein sequence (LotjaGi2g1v0138800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVNFGKKLKDRQIQEWQGYYINYKLMKKRVRQYAQQIQLGTQDRRHVLKDFSRMLDSQIEKIVLFLLEQQGILASRIEKL VEQHDALQQEPEINKINGLREAYRTVGQDLLKLLYFVEINAVGLRKILKKFDKRFGYRFTDYYVKTRANHPYSQLQQVFK HVGLGAVVGALSRNLHDLQDRQGSYLSIYDQPSLPLQDPVIDSINAAVDRLTHSTNFLNFLAQHALIMQEDLPAPTEEPV DDKRYHFMSLLLNLANTFLYMVNTYIIVPTADDYSTSLGAAPTVCGIVIGAMAVAQVFSSVYFSAWSNKSYFRPLVFSSI ALFFGNILYALAYDISSIWVLLIGRLFCGLGSARAVNRRYISDCVPLRIRMQASAGFVSASALGMACGPALAGILQIDFK LYKLTFNQNTLPGWVMAVAWLIYLVWLWITFKEPSHDTEENQGPQQSNDDENSALENGLKQPLLIASKDKVDEDADQDFD ESEEAPEESRVPANSIGSAYRLLTPSVKVQLLIYFMLKYVMEILLSESSVITTYYFNWSTSTVAVFLACLGLTVLPVNII VGSYISNLFEDRQILLASEIMVCIGVLLSFNIIFPYTEPQYICSGLLVFVSAEVLEGVNLSLLSRVMSSRLSRGTYNGGL LSTEAGTIARVIADATITLAGFVGESRILNVTLLPSLLITICSILATCYTYNSLY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 249 | 249 | - | – | |
ProSiteProfiles | 2 | 145 | 144 | 22.125 | ||
CDD | 2 | 141 | 140 | 1.18543E-86 | – | |
PANTHER | 16 | 695 | 680 | 0.0 | – | |
PANTHER | 16 | 695 | 680 | 0.0 | – | |
CDD | 247 | 653 | 407 | 4.06417E-31 | – | |
TMHMM | 249 | 271 | 23 | - | – | |
SUPERFAMILY | 249 | 661 | 413 | 9.16E-31 | ||
Phobius | 250 | 268 | 19 | - | – | |
Pfam | 256 | 637 | 382 | 1.3E-24 | ||
Phobius | 269 | 279 | 11 | - | – | |
Phobius | 280 | 303 | 24 | - | – | |
TMHMM | 281 | 303 | 23 | - | – | |
Phobius | 304 | 314 | 11 | - | – | |
TMHMM | 310 | 332 | 23 | - | – | |
Phobius | 315 | 332 | 18 | - | – | |
Phobius | 333 | 337 | 5 | - | – | |
TMHMM | 336 | 353 | 18 | - | – | |
Phobius | 338 | 356 | 19 | - | – | |
Phobius | 357 | 376 | 20 | - | – | |
TMHMM | 373 | 395 | 23 | - | – | |
Phobius | 377 | 399 | 23 | - | – | |
Phobius | 400 | 410 | 11 | - | – | |
TMHMM | 410 | 429 | 20 | - | – | |
Phobius | 411 | 429 | 19 | - | – | |
Phobius | 430 | 510 | 81 | - | – | |
TMHMM | 511 | 533 | 23 | - | – | |
Phobius | 511 | 536 | 26 | - | – | |
Phobius | 537 | 541 | 5 | - | – | |
Phobius | 542 | 562 | 21 | - | – | |
TMHMM | 543 | 565 | 23 | - | – | |
Phobius | 563 | 573 | 11 | - | – | |
Phobius | 574 | 593 | 20 | - | – | |
TMHMM | 574 | 596 | 23 | - | – | |
Phobius | 594 | 598 | 5 | - | – | |
Phobius | 599 | 623 | 25 | - | – | |
TMHMM | 601 | 623 | 23 | - | – | |
Phobius | 624 | 667 | 44 | - | – | |
TMHMM | 668 | 690 | 23 | - | – | |
Phobius | 668 | 692 | 25 | - | – | |
Phobius | 693 | 695 | 3 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0138800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…