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LotjaGi2g1v0151600.1

Overview

Field Value
Gene ID LotjaGi2g1v0151600
Transcript ID LotjaGi2g1v0151600.1
Lotus japonicus genome version Gifu v1.2
Description PfkB family carbohydrate kinase; TAIR: AT5G51830.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|Q9FLH8|SCRK7_ARATH Probable fructokinase-7; TrEMBL-Plants: tr|A0A0S3TB44|A0A0S3TB44_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0151600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:54616075..54620462) extracted from Lotus japonicus Gifu genome v1.2.

CTCAATAGGACCATCAAGCACCTCTACAGCCTCTTGGGAAATCTCCAAAGGAGGAAGGGGGAGCATCGGAGGAGTCCCGA CAAACAGCAGCAGAGTACTTGCAAGCAGAAAGTTAAGGAAAAAGCACCATATTAGATATTAGTTTTAAACGAATTATCAC TTGAAAGTATTATTTTAGTAAAATTTAAGCACAACTCATTTTAGACATAAAATAATATACATCAAATTTACAATTAAAGT AATTTCCATTTCTCCTTGGTCAGCCCCTACCGCTTAGTGCGCTGACCGTTGGGCGAGAGATTAGTCTCACGGCTGTTGGC TATGGGGATACCTTCGTTAAAGACAAAAAAAAAAAAAAAAAGTAATTTTCATGAAGTTAATGTTATTTAATTAACCCCTA ATTGTTCCTACATAAATGGTACGAAAATGCTAAATATCATAAAACTTGCAAGAAAAGAAAAGAAAAAGTTGGAGACTTGG AAAAAAGCTTAGGCAACTGGTTAGTAAAAATCTGGGTGCTGCTGGTGGTGCTGTTGTACTCATTGATGTTGAATTGAATT CCTCGTTGTTACCAATTTCTCTCCTTCTTCTCATCTACCCTTCTTCTTCCCTCCAACAACAACAACAACATAGCTTCTTC CTCTTCCCCTTTCTCTGCTGCAACACTCTGTTTTCTTCGTTCCTGAGCTCAACGCTTTTGATTCATGGCGAACTCCACCG CTTCAGGTTTTTTCATCTGTCTTCTTCATCTTTCACAGCCCTCTTTTTTTTATTGGTTTGTTACTAGATTTTTGATGTAA AGATTGTATCTTTGAGGGATTTTGGATAATGGGTCTTGCTCCTTCTGCGATTTGCTTCACTGAATCTGATTTGAGAGGTC TTTGTTGAGTTTGTTGGTTGGTCCCAGTGTTTTGTTCTGCTGATGATTGGATGCATGCTGTTATCTTTTTCTCTATGTTG TCAATCAGTGTCTTTGCTTGTTTTCTGGTAAAAGGAGATGGACCCATCAAATGGGTGTGATTTTCATGATTTCATGCATA GGGACAAAATCATGATAATTTGGTTTTTCTTTAATCATTGCTGATGTTAGCTTTGTATAGTGTTCTCTATGCCAATTGAT GCAAAAAGAATGATTGGGTTTTTTTGGGTGGATTGGGGTGAGGAGAAGCTATATTTTTTTGTCATATGTGCATGAGATCT GTGTGATTTAGGCGCAAGTTGAACCTGCATGTTTTATAGTATGCGACTAACATATACACTAAGGATAATCAACTAATCAT CATAGTGACAGTATCTTGAAGTGCTTCAATTTTTACTTAATTCTGTGCAATTAGATTGTTATAAGGAAAAGGCTTTGGAT CTTTAGTTCATGTTGGTCTGAGGCTACTGCTTTTGCACAGGTAAATCCAACGGCCTCGCGAAAGAAGACTGCAAGGAAAC AAGTTCACTGGTTGTTTCCTTTGGAGAAATGTTAATAGATTTTGTGCCGACCGTGGCAGGAGTGTCACTGGCTGATGCAC CTGCTTTCAAGAATGCTCCTGGTGGAGCTCCTGCCAATGTAGCTGTTGGTATCTCTAGACTGGGGGGTTCATCTGCTTTT ATAGGCAAGGTGTAGTTTTCAATCTGTCTGTTTTTCCTATTTGTTCACTTTCTTGTTATTAATTATCCGAACATCCTCCT GGAAGATTTTGTTCAAATGTTAAGACTTATTGCTATGTTCTAAACCGAGTATGCTCTCTGAAGGTGATTGTTTGTTTCTG TTTAGTTTCCCTAAAGAATTCTAAAAAAGAGTGAAGACAATACAATAAACTGTGGAAAGAAAATACTTGCTTGAACTACA GTAATCGAAATTCATATATTAATTTCTTATCATCTATATATTAGGTTGGAGCAGATGAGTTTGGTTACATGTTGGCTGAC ATTTTAAAGAAAAACAATGTTGATACATCTGGCATGAGGTTTGACTCAAATGCAAGAACTGCGTTAGCTTTTGTTACTCT TAGAGCTGATGGCGAGCGTGAGTTTTTGTTTTTCCGGAATCCAAGTGCTGATATGCTTCTTCACGAGTCGGAACTTGATA AAAATCTCATAAAACAGGTGTTTTAAATTTCTGTTTGTTCATCACTTTTTATGAAATATGGCTGAAGACCTGTGTGGGTT AATTTAGGATGCTCATAATATTGATTTCAGGCTAGCATTTTCCATTACGGCTCTATCAGCTTGATTGATGATCCGTGTAA GTCAGCTCACCTTGCTGCTATGAGAATTGCCAAAAGCTCCGGTTGCATTCTATCTTATGATCCAAATTTGAGATTGGCAC TATGGCCATCAGCAGAGGCTGCTCGAAAAGGCATAATGAATATTTGGGATCAAGCCGATATCATAAAGGTATTTAATATT ATTATCCATGATTTTATTGAAAGACACTAATTCACTCATCATTTTTTGAATACTTTTGTCTAATGTTGAAAAGTAGAATT CTATTATTACTTTCCCTATTTCTAAGTAGGCCTGATGCAGTATTTTCTTACACATGTGCAGATAAGTGAGGATGAGATTA CATTTTTGACTGGAGGTGAAGACCCTTATGATGATAATGTTGTTCTGACAAAACTTTTTCATCCTAATCTCAAGCTTTTA ATTGTTACTGAAGGTTCAGCGGGTTGTAGATATTACACCAAGGTATGCTTTCCAAAGTCGCATTTGACAATGATGTCACA TGTTTTCTTGGAACCTGGAAGCACATTTTCTCATTTCATCTTTGCCTTGTTTTTGTGCCAGTGTGCGCACTTGCATCTAC ATTCAATGGACAAATATCACAATAGATGTACCTTATTCTCATAAGTTATGGACTGAATTGATGGTTGTGGCTTGTAAATG TGAATGCACTAATGCAACACCATCTTGTAATAATGTACTGAATGGCTACTAAACTATTTGCTAGTAAAATTGACACTGTT TGCTTTTTAGGGTTTTCCCATTTCACTTGCTTTTCTTTTTCCACTGGTGTTTCGTTGTTCAACTGATTGCAATTGCTAAA TTTCTGTGCAGGAATTCAGGGGCAGAGTTGCTGGTGTTAAAGTTAAACCTGTGGATACAACTGGTGCTGGTGATGCATTT GTTAGTGGGATTCTGTACAGTATAGCTTCCGACCTGAGTATTTTTCAGGTAATTTTGAATTTTGATTCATTCTTTCTGTA GATTAAATGTCTGGCTCCATCTGGATCTCATTAAAGACAAATTTCATGCGCCCCATTTTCATATTGCGCGTTTTGTGATT AAATTCCATTAATGCTGACACTTGAAGCTGAATGATTGATTGATTGTGCTATATTGTTTTTATTTTATTCATGTCCCAAT GTGTTCTAGGGGACAGAAATGCATGCATGTTTTATTATACATTCCTTCAATTTCTTCTTATTCATTTTTATGTGAATCAA ATGTTGATAAAAGGAAATAAGGAATAAAGAAACTGAAGATGGAGAAACTCTTATCACTTTTGTTGAGGATCAGCAATTAC TTATGGAATTGAATTGCCTTTTTCTGTTAATTGCTATGAATGATTCCTGTTTAAATCTTTAGGCGAAGAGCATTATATTC CGTAACATGCATTCTGGTAGAAGATATACGTAAGATTTATGCCTACTTTAGTCCCGTACTCTCTAAGTAAACTGTGCTAG ATTGAAATTTTACTGTGGTTGAAATATGTGCTTAAACCAGAAGTTTATCCATAATTTCATGGCAAACTGTTTAGATGCAC TGTGCAAGATAGAAAACTGTTAGTTGACTAAATTAAAATTGCTTCCTTCATGTTCTGAAAGAACAAAGTTGAAGATGTAT TAAAGAGATATCAGTTGAAATATATGCTACTTTTTGTTTTTAGGTTTGATGAATAGGGGGCTAAAGTTGGAACAATATGA CTCAATCAATTAAGTATATGCTGTCTTCACCATTCTTGCTTATGTACACTTATTGTCTTTGGCAGGATGAGAAACGACTT CGAAAGGCTTTATATTTTGCTAATGTATGTGGTGCCATCACTGTAACTGAGAGAGGTGCAATTCCTGCTCTTCCTACAAA GGAAGCAGTCTTGCAATTCTTGCTAGAAGCAGCTGTAATACAACAGGACTAACAGTGTTTTTGTTCAGATTTGTTGTTAA GCTATAGCTTAGGTGATACTGAGCTCTTTTTTTGGTTCTTTCAATTGAAATCTTTGTTCTTGTAATTTTCTCATATAAAT TCAAGTTGCCTTGCCCTCTCAAGTGTTTGGCTAATAACAACTAAGCATACTAATTGTTGTTGAAGTGCTTCTAGATTTGG AACTTGTTATAAGACCAAAGGTATTCAATATTCATTTATTGTCGAGTAATAAGGATTTTTTCATGAAG 

CDS sequence (LotjaGi2g1v0151600.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCGAACTCCACCGCTTCAGGTAAATCCAACGGCCTCGCGAAAGAAGACTGCAAGGAAACAAGTTCACTGGTTGTTTC CTTTGGAGAAATGTTAATAGATTTTGTGCCGACCGTGGCAGGAGTGTCACTGGCTGATGCACCTGCTTTCAAGAATGCTC CTGGTGGAGCTCCTGCCAATGTAGCTGTTGGTATCTCTAGACTGGGGGGTTCATCTGCTTTTATAGGCAAGGTTGGAGCA GATGAGTTTGGTTACATGTTGGCTGACATTTTAAAGAAAAACAATGTTGATACATCTGGCATGAGGTTTGACTCAAATGC AAGAACTGCGTTAGCTTTTGTTACTCTTAGAGCTGATGGCGAGCGTGAGTTTTTGTTTTTCCGGAATCCAAGTGCTGATA TGCTTCTTCACGAGTCGGAACTTGATAAAAATCTCATAAAACAGGCTAGCATTTTCCATTACGGCTCTATCAGCTTGATT GATGATCCGTGTAAGTCAGCTCACCTTGCTGCTATGAGAATTGCCAAAAGCTCCGGTTGCATTCTATCTTATGATCCAAA TTTGAGATTGGCACTATGGCCATCAGCAGAGGCTGCTCGAAAAGGCATAATGAATATTTGGGATCAAGCCGATATCATAA AGATAAGTGAGGATGAGATTACATTTTTGACTGGAGGTGAAGACCCTTATGATGATAATGTTGTTCTGACAAAACTTTTT CATCCTAATCTCAAGCTTTTAATTGTTACTGAAGGTTCAGCGGGTTGTAGATATTACACCAAGGAATTCAGGGGCAGAGT TGCTGGTGTTAAAGTTAAACCTGTGGATACAACTGGTGCTGGTGATGCATTTGTTAGTGGGATTCTGTACAGTATAGCTT CCGACCTGAGTATTTTTCAGGATGAGAAACGACTTCGAAAGGCTTTATATTTTGCTAATGTATGTGGTGCCATCACTGTA ACTGAGAGAGGTGCAATTCCTGCTCTTCCTACAAAGGAAGCAGTCTTGCAATTCTTGCTAGAAGCAGCTGTAATACAACA GGACTAA 

Protein sequence (LotjaGi2g1v0151600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MANSTASGKSNGLAKEDCKETSSLVVSFGEMLIDFVPTVAGVSLADAPAFKNAPGGAPANVAVGISRLGGSSAFIGKVGA DEFGYMLADILKKNNVDTSGMRFDSNARTALAFVTLRADGEREFLFFRNPSADMLLHESELDKNLIKQASIFHYGSISLI DDPCKSAHLAAMRIAKSSGCILSYDPNLRLALWPSAEAARKGIMNIWDQADIIKISEDEITFLTGGEDPYDDNVVLTKLF HPNLKLLIVTEGSAGCRYYTKEFRGRVAGVKVKPVDTTGAGDAFVSGILYSIASDLSIFQDEKRLRKALYFANVCGAITV TERGAIPALPTKEAVLQFLLEAAVIQQD 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 15 340 326 6.0E-194
PANTHER 15 340 326 6.0E-194
Gene3D 21 346 326 3.4E-109
Pfam 24 331 308 2.4E-79
CDD 24 326 303 1.55451E-131
SUPERFAMILY 25 339 315 2.34E-88
PRINTS 50 69 20 1.0E-6
ProSitePatterns 55 79 25 -
PRINTS 205 220 16 1.0E-6
PRINTS 247 258 12 1.0E-6
ProSitePatterns 276 289 14 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Kinase activity Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.
Molecular function Phosphotransferase activity, alcohol group as acceptor Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor).

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0151600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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