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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0156500 |
| Transcript ID | LotjaGi2g1v0156500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | OTU domain-containing protein; TAIR: AT3G57810.2 Cysteine proteinases superfamily protein; Swiss-Prot: sp|Q8LBZ4|OTU_ARATH OTU domain-containing protein At3g57810; TrEMBL-Plants: tr|A0A072VP60|A0A072VP60_MEDTR OTU-like cysteine protease; Found in the gene: LotjaGi2g1v0156500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:55569815..55574205) extracted from Lotus japonicus Gifu genome v1.2.
GTCAAGGAGCATAAAAATATTTACAAGATACACAAAAAAAAAAAAAAAATTCACATAATATAAATATAAATTGTCAAGCA AAATTGAGCACGAGTTGTTGTTACTTTTCCACCAAAGCAGCGAGCACACACATTTCGCTTCTTCGTAATTGTAAGTTCAA TTTCAAAACCTATCAATCTTCTTCTCTTCTCTTATTATATTGTAACCATGTGCACACATCATTCTCATGCATTCAACAAA CTTTGACAGTTATGGGTGCGTAGGATAACCAAAGCAGCGCACTATAGCCACCCCTCTCCATTTCACCATCATCATCATCA TCACCATTCATCCATCCATGCTTGGAGTACTCTGCGCCACTTCTCGTCCTAAGCCATGGATCCTGTCCTTCCTCCATGCT GCACCACCGCCTCACCACGGCACCCGCATCGCCTCCGCCGCCGCGCCGCGCTATCTCCTCCACTCCAACGCTTGTAATCT CCGCCCTCACTCCAGCGCCTGTGACCTCCGCACCTCCGGCGCCGCCTCCATATGGCACGCTATCATGCCTTGCGGCGGCG ACGGACGCCTCGCGCTCCACCACGACCTCGACCTCAAAGGCGAGGGGTCGTGGAATGTTGCCTGGGACGCGCGTCCTGCT AGGTGGCTCCACCGCCCTGACTCGGCTTGGCTCCTCTTCGGTGTCTGCGCCTGCCTTGCGCCGCCGTTTTGCCCTGACGT TTATCCCGAGGTTACGGCACCGGCGCCGGCGGCTGCTGACGATAGTTCCGAGGGAGGTGAATTGAAGAGTGTGGAGTGCG TTAAGGAACGCGATGATGAAGCCTCTGCTGCTGCTGATTACAGAGTCACTGGTTCGTTTTTTCTTTTTTTCTAAGCAAAT TTGAATTGTTTTTCAATCATTTCTGTGTGATCAATTGGATATGTAGTGTAATTTACTAATCTATGCCTTGTTTGTTTAGG ATACAGTGTTTGATACTTGGATTGGAGGTGTAGTTTATGGATAAATGAATGATACTTTTTGCTTTTGCTTTGAGGGTTAA AGCACTTTCAGTTTTAACAATGATGATTACTTTATGAAAAATGAAATTGCATTTTTGTCTTCAATAGATGCTTGCTTGTG TTTTATTATTTTTCTCTAAGAGTACATAGATTGGTTGGTGTTGGTTGGTTTGGTGATTTTTGTGGTAGTTTTACTGTGTT AGCAAAGTGTGAAAGTTACTGCGGTTTAAATCAAGTTCCGCGATTGTGATTTCGCGCGCTGACAACAAGGTTTTGGAGGT TTTTGAAACCGCAACGCCCGACAGTAATTTCGGTCGCGACAGCCGCATTTTTTCACAGTTTTCCGCAATGCGAAGGACTG CAATTGTGACGTGGCAGCAGCAACTGTTACCGCGACCGCAATTTAAAACCTACACCTAAGCCTTCAAGCAGTTATTTTTT TTTGGGGGGGGGGGGGGGGTAAAAAGCATTGTTGTTATGATGATTTGATTACAGATTTTGTTGAAGCAGAATGAATAGTT TTTCTTTGTGATTATTGCTCTTTATGAGTGTTTTGGAGGTTTCCGAAACCCAAACACCACCTTAATTTTGGCGCGAAAAC AATTTTCCATAATACGAAGGCCCTGACTGTAATTGCGACCACAATTTAAAACCTAGGCCTTCAAGCAGTTAGCCTTTTTT TCTTTTTGGGTTAAAAGTGTTGTTGTTATGATGATCTGATAACAACTTCTGTTGAAGCAGAATGTAGAGTTTTTCTCTTT CTGAGTATTGTTCCTCTATATGAGTGTTTGATGGTCTGTTTAATTGTTCCTCTATTTTGTTGAAGCAGAATGAAGAGTTT TTCTTTGTGATTATTGCTCTTTATGAGTGTTTTGGAGGTTTCCGAAACCGAAACACCACCTTAATTTTGGCGCGAAAACA ATTTTCCATAATACGAAGGCCGTGACCGTAATTGCGACCACAATTTAAAGCTTAGGCCTTCAAGCAGTTAGCCTTTTTTT TCTTTTTGGGTTAAAAGTGTATTTGTTATGATGATCTGATAACAACTTCTGTTGAAGCAGAATGTAGAGTTTTTCTCTTT CTGAGTATTGTTCCTCTATATGAGTGTTTGATGGTCTGTTTAACTGTTCTGAAAGCATTACTCTGTCTTGTTGTGATTCA ACTAATCTTTATGAGTGTATGATGGCCTGTTTAGTACAGAAATAAAAACCTTTTGCAAGAGATTCTGTGGATTTATTTGT CATTGAATGATATAGGGGTGCTTGCTGATGGTCGGTGCCTGTTCAGAGCAATAGCTCACGGAGCTTGCTTGATAAACGGA GAAGAAGCGCCCGATGAGAACCGTCAGATGGAACTGGCTGATGAGTTGAGGGCTAAGGTAAGTTCATTCTACTTAATAGT TTGAAAAGGAAAATACATCTCATCCTTCTAGTTCAACTTTTGTTGTTTATGGTTGTTATAACACGATTATCATGTTTTAT TTAAAGGTTGCGGAAGAATTGTTGAATAGGCGTGAGGAAACTGAATGGTAAGCTTTCTAATTTGATGGTACACAATTAAA TTGGGGGGACTATATGATGGACCATTTTTTAAGTGGCCCACCAATGATTCATTGTTTTTAGTCGTTCATATAATGGTTTT ATAATTGAAGATCCTGAATCAACTGTTAGTAACAGTGGATCACCTGTGGACCACTTAAAAAATATGTCCACCATCCACCC TATAACTTCCCTTAAATTTGTTCTTTTTTAATTTCCGCACTTGGTTACTTATTATTCTTTGTTGTGTCTATAGGTTTATA GAAGGAGACTTTGATTTATATGTGACAAGAATGCAAAAACCTTGTGTCTGGGGTGGGGAACCTGAGATATTGATGGCTTC TCATGTTTTGAAGTAAGTTCTTTTGTATGTTAGCTCTTATTACTATTCAATCACATTAGATGACTTTAAAAGTTCAAAAT ATCATATTTTAATGAGGCAAATATGTTACAACAACAAAGTACCAATAACTTTAGAACATATGTTACAACTAAAGACTTAC TCTGACTATTTTTTAGAACATATGCTGCATATTAGTAGAGTTGAAAACCCTAGGATAGACGATGATCACTCTATAAAATC TTGGTAAAGGGTGTTTTGATTGAGTGTGTGATGAGAAAAAAAAGAGAGACAAAGACATGAAGTAGGTGTGATATACAATG TGAAGACATCAACACTCATGAAACCTGAACAATATTGGATAACACACTTTCAGTTCATTTTATATGATAATTAGGTGCAT GTCTTGATTTGTTGGTATGAATCGTATGATATAAAACCCATCTTTGTAATACTCATTCAGACGTTTTTTTACTTATATCA CGTTCTTCCCTTACTTTCTATCTAATACAACTTGCACACCTGTATACTGTATATATGTATTCAAGAGATACAAGCTCTAC TGACATGGTCTACAGGGTAAAATGATAGTGAAGAATATAAGAATGATAAAGATGTTTGCATTAATGTGTTATTTCACGTA GTGTCCATACTCGTGAAGTTATACGTTGATGAAAATATCATTATCTTTCTTATATTCTTCACCATACTTTACTATGTTTA TTATGTCAATAAAGCTTGTATCTCTCATGAATACAAACACACATGTGAAAGACATCACTCATAAAAACAAGGACGTTTTC AGTTTATTTTATATGATAATAATTGCATGTCTTTGTAATACTCATTCAGACATTTTATACTTTTATCAAATTCTTCCATT GCTCTGTATCTAATATTGTCTGCATAACTTTTCAGGACTCCAATATCTGTATTCATGAGAGATACAAGCTCTACTGAGAT AGTAAACATAGCAAAGTATGGTGAAGAATATAGGAATGGTAAAGATATTTCCATCAACGTGTTATTTCACGGGTATGGAC ACTATGAGATACTAGAGACCTGACCCAAATTTCCTTAAAAAGTAAACACATTGCAGTAGAACCTCAAGTTCCGTTGATCA TGCGGTTTAAGACGCATAAAGAGAGTTCTTTAAATTTTTTGGCCATCCAGGGATTTGTTTCACTGAATTTAGTGGATTTT TTTTCAACAACTGTATTTTGAGCCGCAGGGAACTTCAATTCAAGTAATAGGCATTTGTGATTTTTGTAGTTTGCCTACTT TCTTATGATGTTTAAAATTTAGTATACTACAATAATCATTAGGGGGTGAGAAATTAGAATATTGACAATAAATAAATATT TGTTACAAATAATCATTAGGGGTTTGTGATTGGCATTAATTGATTCTTTGGGGTATTCACTTCATGGTATATATTTTGAT AACGGGAAGAAAAGGTTATGCAATCATTTTAATTTTGGATGCTTTGAAAAGTGTAGGATACTAACTCACTT
CDS sequence (LotjaGi2g1v0156500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTGGAGTACTCTGCGCCACTTCTCGTCCTAAGCCATGGATCCTGTCCTTCCTCCATGCTGCACCACCGCCTCACCA CGGCACCCGCATCGCCTCCGCCGCCGCGCCGCGCTATCTCCTCCACTCCAACGCTTGTAATCTCCGCCCTCACTCCAGCG CCTGTGACCTCCGCACCTCCGGCGCCGCCTCCATATGGCACGCTATCATGCCTTGCGGCGGCGACGGACGCCTCGCGCTC CACCACGACCTCGACCTCAAAGGCGAGGGGTCGTGGAATGTTGCCTGGGACGCGCGTCCTGCTAGGTGGCTCCACCGCCC TGACTCGGCTTGGCTCCTCTTCGGTGTCTGCGCCTGCCTTGCGCCGCCGTTTTGCCCTGACGTTTATCCCGAGGTTACGG CACCGGCGCCGGCGGCTGCTGACGATAGTTCCGAGGGAGGTGAATTGAAGAGTGTGGAGTGCGTTAAGGAACGCGATGAT GAAGCCTCTGCTGCTGCTGATTACAGAGTCACTGGGGTGCTTGCTGATGGTCGGTGCCTGTTCAGAGCAATAGCTCACGG AGCTTGCTTGATAAACGGAGAAGAAGCGCCCGATGAGAACCGTCAGATGGAACTGGCTGATGAGTTGAGGGCTAAGGTTG CGGAAGAATTGTTGAATAGGCGTGAGGAAACTGAATGGTTTATAGAAGGAGACTTTGATTTATATGTGACAAGAATGCAA AAACCTTGTGTCTGGGGTGGGGAACCTGAGATATTGATGGCTTCTCATGTTTTGAAGACTCCAATATCTGTATTCATGAG AGATACAAGCTCTACTGAGATAGTAAACATAGCAAAGTATGGTGAAGAATATAGGAATGGTAAAGATATTTCCATCAACG TGTTATTTCACGGGTATGGACACTATGAGATACTAGAGACCTGA
Protein sequence (LotjaGi2g1v0156500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLGVLCATSRPKPWILSFLHAAPPPHHGTRIASAAAPRYLLHSNACNLRPHSSACDLRTSGAASIWHAIMPCGGDGRLAL HHDLDLKGEGSWNVAWDARPARWLHRPDSAWLLFGVCACLAPPFCPDVYPEVTAPAPAAADDSSEGGELKSVECVKERDD EASAAADYRVTGVLADGRCLFRAIAHGACLINGEEAPDENRQMELADELRAKVAEELLNRREETEWFIEGDFDLYVTRMQ KPCVWGGEPEILMASHVLKTPISVFMRDTSSTEIVNIAKYGEEYRNGKDISINVLFHGYGHYEILET
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 21 | 21 | - | – | |
| PANTHER | 2 | 307 | 306 | 1.6E-122 | – | |
| PANTHER | 2 | 307 | 306 | 1.6E-122 | – | |
| Gene3D | 152 | 307 | 156 | 1.2E-29 | – | |
| ProSiteProfiles | 168 | 307 | 140 | 17.512 | ||
| SUPERFAMILY | 168 | 305 | 138 | 4.81E-15 | ||
| Pfam | 175 | 298 | 124 | 1.3E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0156500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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