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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0170000 |
| Transcript ID | LotjaGi2g1v0170000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha-galactosidase; TAIR: AT5G08370.1 alpha-galactosidase 2; Swiss-Prot: sp|P14749|AGAL_CYATE Alpha-galactosidase; TrEMBL-Plants: tr|V7C549|V7C549_PHAVU Alpha-galactosidase; Found in the gene: LotjaGi2g1v0170000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:58523113..58530798) extracted from Lotus japonicus Gifu genome v1.2.
ATTTGATAGAAGGAAATAAAATACCGGATAAACATGAATACATCAAGGTAGACCATTGTTTGATGCGTCCAACAGACAGC TGGCTGGTCCACTGTGACCGATCCATCCTCACTAACCTCCACTCATTGCTCCATCCATCGATATATTTGATGAGTGACGC TCTTCCTAAGTTGCAATATTATGTCTTTTACTTTTGTCATGTGTGAAAATAGTTGTAAGCTATAAGGCCACCGCCAAGCT TTGATTTTCTTCTTTTCTTTCTTTCTATCTAATCTAACTTCTGCTTTTCTGAAATTGCTTAGTGCACTCACTATGGCCTA CACTATAAATCATTAGCTTGCAACTTCAATATTTCTTGGATCAAACACATACATATATCAATATATACATTTAGTCACAT ACATTGATTTATTAATTTTACTCTATAGTCTATATGGCACTGCCATATTCATTCTCAATTTGGAGGCAGAGGTTAACCAT GGTGGCAGGACTTGTTTTGTGCCTCCTTGTGCTCTTGAACAATGCAACCTCTTCATCTGCTCGTTTGTTGTTGAACAGAA CCAGAGAAATTCATTTGCATAGGAGGAACCTGGTTGACAATGGACTTGGATTGACACCCCCAATGGGGTAAGAGATCTCT TTTTCTTTCCATTTCCTATTATGTGATAATCCTGTTTTCTCTGTTCTTCATTACCCGTGTTCCAGAGTTTTTTCATTTAA TCAGCATACTCAAATAGTTGAATCATGACCAGAATTGAATGATATGTTGCTAGCTGTATCTGATTCATAAACTGGTGTAT AATGTCAAAGAGAGTCTCATTGAAGAAGTATAACCTCTAGTAATCTCTAGTTAATTTTGGCAATCACCATTCTCTAGCTG TATTCTCGTCAATCATATTAAATATTACTTTTGCTTTAAAAAAAGATAGATATGTCCTAACTAATTCCTAAATGTACTAA TTGCATCACTGAATTCCATAGTCTGCAATCACTGTGAACATTTTGGGAATGAGGGGAAGCCATTAAGGATAGGTAGTAAA CTCAAAAGGGTATATTGTAATATTAGAGATAATCTTATTAAATCAGAACATCTATATTTTAATAGGGTTAATTCTCCTAA CAAATTCTTTTATACATAATACTCTAACTCAAAATCTTAGCTAAAGGAAATCAGGTATTTTATGAAATGGGAAATTAATG ATAATTTACTAATAGAAACATTAAAATGTTGCAAAGAAGAGTGCTTTAGACACCCACTTTTTTTTTTATTATGGCATATG CATGCACTTGAATTGAACCCATGTGAGAATTGTTTTCCAACAACAATATACTTACTAATATTTCAAGTTTTTGACACTCA TTTTAACACTTTTTTTTAACACTTTATTATGCATTCGTCAAAATTTATGTAAGTTCTACTAAATTTAAAATGAAAACTCA AATTTTTAATCGATTCAATATAAAACTTATCATTGAGAAACTGCTAAGAAAAGAGTGTTACTAGAGTTTTTTTTATGCTT GAAATCCATGTGTGATTCGTTCACACAAATCTAAGAAAAACACTCGTTAATTATCACCGTCAACTCCTCAAGGTCCACTA ATACATCCAATTTACTTGGTTATGAGTGGCACGAAATGATGGGAGTGATTCCATGGAAGCTCAATATGGTGGTGGCATTT GTCTTGTTCAACACTACTACAATTTATTAAGTTGCAATTAAGACTCTTGTTTTGTGGTTTGTGGGTTTTTCGTTTCTTGT TGGACTCAACCACCGCCGATGAAAAAGACCCTCCAAGACTTTATTTCACACAAAATATTAAGGTTCACACTAGTAGGAGA TATAAAAATATCTAAACCACTTACTCGGCCATTATCTATTTCTTGTTATTTTTAAGTAAAATTAATACATGGTCTACTAT ATATATTTTCAAAAATATTTTTAAAGATTTGTTTTGAAACTCAATATATTTTTAAATATTTTTTAAGATGTAAGACGGGT GATTAGTTCAAGCAGTACATGTTTGATTTCCCTTAAATAAAATTTTAGATTTGAGTTTAGTGGATGTAAAAAAACCTAAC TAACAAGGTTAGCTCTATCATAATGTGGATGTTTCCGACTTAAACAAACATTGCACATAAAAAAATTATAGTGTCATAAA ATAAAGGGTATTTTCCGAAGTATAAAAAAAGGTAAAAGAAAAAGAAAAATAATTACAATCACATAATTGAAGTACTTTGT GTTTTCTTCTTTATCAATAGATAAATACAAACAAAAGAAATACAAGGAATAAAATAACCCTCCCTAGGTTCTTGAGTTGT CTCCATCATCACTTATTGCATTCCCCGATCAAGAATCTACCTTGTATTATAACAATCATTAGAAATATACTACTTATTTA TATTACTCTTTTTATAAATCATTTTGAACTAATTCATATAGAATAAAAAATTTCTCAAAACAATTTTTTGGTATCTAGAT ACCAATAGGATTTGAACACAGGATTTGAGAAATTTTAATCTATCAAAGTACAATTTAGACTATATAAACAAATATGTTAA TTTTCTTAAATTACTACTTATTAAAAAATAAGAAATTGATTGTGATTTTTTAAATGAAATTATGTTGGCTAAAGCCAAAG AAACAAAACAAAAAGAGAAAGACAACTACATGCCTCTACATAAATTACGGAGGCACTAATCGATATAAACAAAGTTCTAC AAAAAGAATTAAGTGAATCAAACATCTTTGTCTGATGACTATGCAGACTCAGTTCGCACTTTGTTGAAACCCCAACAAAT TTGTAGTCCGATTTAGTCCATAATTTTTATAACAATTTTATGATGTTTGTTTGATAAATTATTAAAAATATAGTGAGAAC TTTATCATTTATATTCGACCTAACTGTTGTAAAGTCTAAATGTCTTTTTAAAAGTGTATCTCATAACAATTAAAAATAAC AATTTTTACCGACTACCACCGGCACTCATGTTACATACTTTATATAGCAGGTTTATAAGTAATGTGAACATTTGAATAGT TACGTCTTGCATTTTTTTTTCTCCATCATTCATTGTTGTTCTGTGTCACTTTTTTCTGTACATCATGTGATTTTATTTTT TTAGTCTTGAGGCATCTTTTGTCATATATTGTACATATCTCTTAAGTCTTATCCCAAAGAACAAATAAGCGAGATAAATT GTTTTACGAATTTGCATTTTTTATATTAAAAAATTGAGAATTAAATATGATACTTTCTCCATTGTATTATATAGGAATAT CTTGGTCAATTGTGTTGAGTGTGCTTGTATTTCTTCTTTCTGGGTTAAAATATGCGTGTTTAATATAAAGCCTATATATA TATATATATATATATATATATATATATTAGTTTGGCCATTTATTTAAAAGTTTTGACTAGTATGATGCAAAATGTCTTTT TTTTTTGTCTATGTGCAAAGAGTTTCTTTTTAGAAACCATAGAAATAGGTTTGGGCTTGAACTTGTACAGAAGTCCTAAC AATTTGTAGTCAAATTGTTGAAATTTGACTTCATATATAACTTTTTTTTTTTTTACTTTATAACTTCGATATCATTGAAA TTGATATTTTTGATTTGTAAGGTTTTAAATTTTTGCAGCAATGAAATTACTTTTTTAAAGTAAGAGTATGTCTAATTTCT TGCGGATATATGAAGGTAAATGTTCAATATTGACCAATTTTAATGATTAAAAACAGATGGAATAGCTGGAACCATTTTGA ATGTGATATCAACGAAGACTTAATTCGAGAAACAGGTAGCTTACAAAGAATGCATGAATTTCAATTCACTGAATTATTCT TATAATTGTGAATAAATAATCTATGCTCTGTTTTTCTTATATTTCTTCATTATTACAGCTGATGCTATGGTGTCAACTGG CCTTGCTGCTCAAGGGTACCAATATATCAATTTAGGTAGCAAAACAATTTGATTTTTTAATTGCTGTCATTACTAAAGCT ATGGGCATTTATTCATAAAGAAATTGTATTAATGTGATATTTTTTTATACAAATTTTTAGATGATTGTTGGGGCGAACTT AATCGAGACTCAGAGGTAAAATTATTATATTTAGTAAATTAAATAAAAAAAACTGTTATGCTAATGGAATTATTTTATGT AATTTATTTTAACCCGAAATTTGCATGGCTTAAGTTTAAATTTAGAGATCTCTTGTTGATTAAACGATTTTATTGTTACT ATAATATATAGTTTGCTTTGACTTTTAAATTTAGAGTTATATTTGACAACTTAAAATGGTGGCAGGGCAATTTGGTTGCT AAAGCTTCAACATTCCCTTCAGGAATTAAGGCTCTAGCTGATTATGTACATAACAAAGGATTAAAGTTAGGGATTTATTC TGATGCTGGGTATCACATACTAAACTTAACCTTTGACTCTTATATGTCCCTGATTAATCAGCCATTTTTTATCACTAATA ATTTCTTTGCAGAACTCAAACATGCAGTAAAAGAATGCCTGGATCACTAGGACATGAAGAGCAAGATGCAAAAACCTTTG CTTCATGGGTAAGATGCATTAATTTGAAAGCTATTTTGCATTTACATGAACTTATATCCTATATGATTTCAATTAACATC TGTTTTAAATGTTATCATAGGGAATTGACTACTTGAAGTATGATAATTGTGAGAACAAAAATATAAACCCCAAAATAAGG TAATGAGGATTTCAAAAGCATGCAAATCTTTTACCAGCATTTTTGGATTAACTTATTTTTTTCTGAAAATCAATTATGAC ACCTAGAAGCTTCTCACATAAGCTTCTTCTCAAAATTGATTTTACTGTTATAATCAATTGTAGAAGGATTTCCAAACTTG ATGTATCATATATCATTCCATTCATTCGTGCTTTTAAAACCAGGAATTCATACATTTTGTAAACCAGGTACCCACCAATG AGTGAAGCTTTATTAAACTCTGGAAGGCGAATCTTTTTCTCTTTGTGTGAATGGTGAGTGGAATTGTTGATCATGTTTCT CATATAAACTTCACTAATTCATAGTATTTGTATTTCTAATTAGCACATCATCAACAACATTCCTCTTAAAATGCCTGAGA TTGCAACTTTTTTTTATGATTACTTGCTTTCTCGAATGCAGGGGATTAGAAGATCCAGCAACTTGGGCCAGAAGTGTGGG AAATAGCTGGAGAACAACAGGAGATATTGAAGATAAATGGGATAGGTGAGAATGAATGATATGATTTATACACTTATTTA TCTTCAATATCAATACACCATGCTCTTAATTCAAGCAATTTCACTATCTTGCATGCACTACACTTACGTTGGAATTGCAA GAGCAATTATTTATGCAGAAAAAATAAACCTGGACCATGCTTGCATCACACTCATGCTCTATTGAACACTTGACATAGAC ACTTTTCTCCTCTAAAGAGATTTATTTTGAATCAACATGATAGTGGAATCATTAAAAGTATCACTGCTGAGGAATTCATT TTGTTACACTTGCATTATTCTGTTTTGACTCTTCATTTTCACATGGGAACCTTATCATACTTTCTCCACAGTATGATATC TAGAGCAGATCTAAATGACAAATGGGCTTCTTATGCAGGACCTGGAGGATGGAATGGTAATCTTTCTCACCCTTTACTAG TTATCTTGGATTCTTGGACACATTTATCAAAATATCATCATCAGATTACCCAATACTCAATTTATTCCTTTACCAAAATA AGTAAATACATAAGCAAATATGTCACATACAATTCCTATTTACTTTATCATATTGAAGAAATTAGAGTTCACATTCACAT TTTTTGGTGTAGATCCTGACATGCTTGAAGTTGGAAATGGAGGCATGACAACAGAAGAATATCGTGCTCATTTCAGCATA TGGGCGTTAGCTAAGGTAACTTGAACCAAAATTTTCGTACTTTTCTGTTTAGACTTTGCTATATTCCATAATAATGTCCA CCAGGGAAAATGTATTATGCATATTAACTATCAGATGTTGATCTTATTGGCTCGAGCATGATTTCTTTCTATGTAGGATA CATGTCTCAGATTAATAAAAAATATTAACTACTTTTCTTTTGTATGTATAGGCTCCCTTATTGATTGGTTGCGACATTCG ATCACTGGATCACGCCACAATGGAGCTGCTAAGCAACAGTGAAGTTATTGCAGTAAACCAAGGTAGAGAAACACACTAAA ACCCTTCTATCTTTCCTTAACAGTAAATGCTTTTTTTCAAACTAATAGGCTTGTGGAAATGCAGACAAACTAGGAGTTCA AGGAAAGAAGGTGAAAAGTGAGAGTGATTTGGAGGTAATTCCGTTTCCCCTATTAGTTTCCTTGTGTTCTTAACCAGAAA AAACACGTAAAGGAGTGAAAATTTAACACATTATGTAAAACTAACAATAGCTTATTGGAGAGGGGCATTAAGAATTTTCA GAGGGAGAAAATACATTATTTGAGTACTATTCTATTAAGAAAACTATTTCTCTTTAAGAGACAACTGCCTCATTGTGATT GTACCTAGTTCCATCTCTTGCTTGGGTTAGTGTTTCTTTTTTCAGTAAAATTTGGATGAGGTTCTCAGCACATTCGCTTA CTACTTCATACTTTCAAATAACTGCAAAACTATCATAATGGCACCAACTTTGTTTTCAAGTACAATTTTCTTATATTAAC ACATACAAATGAAGTAGATCCTAGTAGATGCTTTTTTGAAGATGAAACCTCATAAATTTTTTATGTCATTTTTTAAAAAA TTTCTCATAGAAAGTAAATATTGCAGGTTTGGGCAGGACCTCTCAGTAATAATAGGCTAGCAGTGATCTTATGGAATAGA AGTTCATCGAAAGCAACAGTAACTGCATCCTGGTCTGACATAGGCCTAGAATCAGGAACTTCAGTTGATGCAAGAGATTT ATGGGAGGTGAGATACTCAGAGCCCGATTGGATACAGACTTCTTTGATTTTATTGAAGCTTTTATCTATTAGAAAAAGCA CTAGATAGAATCCAAATGGTTTGATAGTTTGAATACATATTTTGTCCTTATGGTATTTTGTTGAGTTTTTGAATATTTTT TATTGAATTTTGCAGCACTCTACAAAATCATCAATTTCTGGAGAAATGTCTGCAGAATTAGACTCACACGCTTGTAAGAT GTATGTGCTGACTCCAAACTAAGTTCTCAATTTCTTGAGGCAGAAAAGGAGGTAAATAGCACAAGTCAGGACTCAAAGTA TAGGAAATGAATTGGCAATGCAATCACTGAAGTTCCAAAGATGGAAAAATAAACCATAGGAAGTATAGAACCAACTGAAT AAGCTGCATTTCTGATGAGGTTTCCAATTAAATGTATTTGTTAAGGTCTACGTGCTTTTAAGACAATAAGCCTTTCAAAT ATCTGTTTTCTGTTAACAAAGGCAGATACTGAGAGGAGATTAACTGCATATGATATTTTGTACACATTTATATTTGACTT TTTAAATTTATCTATCCTACTAGAACTAGTAATTCACTTCATTATCCTTAGTTGTAGCCTGCGATTTACTTGAACAAAAT TGTAGCCTGTAAGTACTTTTGGTAATTGACTCGTAATAGTGTAAATTAATTTTGAATGGACCTTTTTATATGCGTTGTGG TCAAAA
CDS sequence (LotjaGi2g1v0170000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCACTGCCATATTCATTCTCAATTTGGAGGCAGAGGTTAACCATGGTGGCAGGACTTGTTTTGTGCCTCCTTGTGCT CTTGAACAATGCAACCTCTTCATCTGCTCGTTTGTTGTTGAACAGAACCAGAGAAATTCATTTGCATAGGAGGAACCTGG TTGACAATGGACTTGGATTGACACCCCCAATGGGATGGAATAGCTGGAACCATTTTGAATGTGATATCAACGAAGACTTA ATTCGAGAAACAGCTGATGCTATGGTGTCAACTGGCCTTGCTGCTCAAGGGTACCAATATATCAATTTAGATGATTGTTG GGGCGAACTTAATCGAGACTCAGAGGGCAATTTGGTTGCTAAAGCTTCAACATTCCCTTCAGGAATTAAGGCTCTAGCTG ATTATGTACATAACAAAGGATTAAAGTTAGGGATTTATTCTGATGCTGGAACTCAAACATGCAGTAAAAGAATGCCTGGA TCACTAGGACATGAAGAGCAAGATGCAAAAACCTTTGCTTCATGGGGAATTGACTACTTGAAGTATGATAATTGTGAGAA CAAAAATATAAACCCCAAAATAAGGTACCCACCAATGAGTGAAGCTTTATTAAACTCTGGAAGGCGAATCTTTTTCTCTT TGTGTGAATGGGGATTAGAAGATCCAGCAACTTGGGCCAGAAGTGTGGGAAATAGCTGGAGAACAACAGGAGATATTGAA GATAAATGGGATAGTATGATATCTAGAGCAGATCTAAATGACAAATGGGCTTCTTATGCAGGACCTGGAGGATGGAATGA TCCTGACATGCTTGAAGTTGGAAATGGAGGCATGACAACAGAAGAATATCGTGCTCATTTCAGCATATGGGCGTTAGCTA AGGCTCCCTTATTGATTGGTTGCGACATTCGATCACTGGATCACGCCACAATGGAGCTGCTAAGCAACAGTGAAGTTATT GCAGTAAACCAAGACAAACTAGGAGTTCAAGGAAAGAAGGTGAAAAGTGAGAGTGATTTGGAGGTTTGGGCAGGACCTCT CAGTAATAATAGGCTAGCAGTGATCTTATGGAATAGAAGTTCATCGAAAGCAACAGTAACTGCATCCTGGTCTGACATAG GCCTAGAATCAGGAACTTCAGTTGATGCAAGAGATTTATGGGAGCACTCTACAAAATCATCAATTTCTGGAGAAATGTCT GCAGAATTAGACTCACACGCTTGTAAGATGTATGTGCTGACTCCAAACTAA
Protein sequence (LotjaGi2g1v0170000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALPYSFSIWRQRLTMVAGLVLCLLVLLNNATSSSARLLLNRTREIHLHRRNLVDNGLGLTPPMGWNSWNHFECDINEDL IRETADAMVSTGLAAQGYQYINLDDCWGELNRDSEGNLVAKASTFPSGIKALADYVHNKGLKLGIYSDAGTQTCSKRMPG SLGHEEQDAKTFASWGIDYLKYDNCENKNINPKIRYPPMSEALLNSGRRIFFSLCEWGLEDPATWARSVGNSWRTTGDIE DKWDSMISRADLNDKWASYAGPGGWNDPDMLEVGNGGMTTEEYRAHFSIWALAKAPLLIGCDIRSLDHATMELLSNSEVI AVNQDKLGVQGKKVKSESDLEVWAGPLSNNRLAVILWNRSSSKATVTASWSDIGLESGTSVDARDLWEHSTKSSISGEMS AELDSHACKMYVLTPN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 36 | 36 | - | – | |
| Phobius | 1 | 16 | 16 | - | – | |
| Phobius | 17 | 28 | 12 | - | – | |
| PANTHER | 20 | 415 | 396 | 1.4E-238 | – | |
| PANTHER | 20 | 415 | 396 | 1.4E-238 | ||
| Phobius | 29 | 36 | 8 | - | – | |
| Phobius | 37 | 416 | 380 | - | – | |
| Gene3D | 54 | 327 | 274 | 8.8E-133 | ||
| SUPERFAMILY | 55 | 325 | 271 | 5.62E-101 | ||
| PRINTS | 56 | 75 | 20 | 1.9E-70 | ||
| Pfam | 61 | 325 | 265 | 1.3E-79 | ||
| CDD | 62 | 325 | 264 | 2.07059E-157 | ||
| PRINTS | 92 | 107 | 16 | 1.9E-70 | ||
| ProSitePatterns | 97 | 113 | 17 | - | ||
| PRINTS | 133 | 154 | 22 | 1.9E-70 | ||
| PRINTS | 168 | 185 | 18 | 1.9E-70 | ||
| PRINTS | 195 | 213 | 19 | 1.9E-70 | ||
| PRINTS | 260 | 279 | 20 | 1.9E-70 | ||
| PRINTS | 281 | 302 | 22 | 1.9E-70 | ||
| SUPERFAMILY | 320 | 414 | 95 | 9.78E-28 | – | |
| Gene3D | 328 | 416 | 89 | 1.9E-29 | ||
| Pfam | 338 | 413 | 76 | 1.2E-20 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi2g1v0170000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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