Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi2g1v0170100.2

Overview

Field Value
Gene ID LotjaGi2g1v0170100
Transcript ID LotjaGi2g1v0170100.2
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Receptor kinase; TAIR: AT1G68400.1 leucine-rich repeat transmembrane protein kinase family protein; Swiss-Prot: sp|Q9M9C5|Y1680_ARATH Probable leucine-rich repeat receptor-like protein kinase At1g68400; TrEMBL-Plants: tr|K7MIT3|K7MIT3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0170100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:58549513..58553104) extracted from Lotus japonicus Gifu genome v1.2.

GGACATTATATCATGCGGGATCCTTAATGAAAGGTTGAAAGCTGTCATGTTGTGTCACTAATTAATACAATAAATAAAAC AAAACAAGCCTCCTAGTTCAGACCGTTTGTGTCCAATACCATTATCAGCATCTAGGCACAACTTTGCCTTGCCAACTTCG TCAAACTGAAAAACAATTAACAAACAAGAGTGTATGATTGATATGACTCTGTTCTCACTTCTTGATTGGTTCCAAAACCC ATGTCAAGCTTCTTTCTGCATTTTCAACATCCACCATCATCATGAGGTTGGCCTTTAAAAAAAGCTTTTGCTATGTGGTG GTGGTGTTGTTTGTGTCATTGAACTTGGTCTTGTGTGTTGAAGATTTTCATCCAGAAGAAAGAGATGCTTTGTTAGTCAT AAGGGATTCTTTAAATTCTTCTCTTGATTTGCATGGGAATTGGACAGGGCCTCCTTGTATAGAGAATCTTAGTAGATGGA TTGGTGTCACTTGTTCCAATTGGCATGTTGTTCATATTGTTCTTGAAGGAGTTAACCTTAGTGGCTTTTTACCTCCCACA TTCCTTCAAAACATAACTTTGTTGACCCAGATTAGCTTCAGAAACAATGCAATTTTTGGGCCTCTACCAAACCTCACAAG TTTGGTGTTTTTGGAACAGGTCTTGCTCTCATTCAATCGTTTCTCAGGGTCAATTCCTGGGGAGTATGTTGAATTGCAAA GTCTTGAAGTGTTGGAGCTGCAACAAAACTACTTGGATGGTAAAATTCCACCCTTTGATCAACCATCATTGACAAGTTTC AATGTGTCATACAATCATCTGGTAGGGCCAATTCCTGAAACTTCTGTTCTTCAAAAGCTCCCAAAGAGTTCATTTGATAA TAATTCAGATCTTTGTGGAAAGCAATTGGATAAGTTATGTCCTGCTGAACCTCCTGCTCCACCTCCAATCCCTGCAGTGG AAAGAAATAAGAAGAGACTTCATGTATGGATTATTGCTTTGATTGCTTCTGCAGCTGCACTGTGTCTTTTTCTGATCATT ATTTCTTTCTTGTTTTCTATAAGAAAAGCAAGTAGAAAAGAAACAAGAAGAGATGGTTCAGCAGGTAAGATCATATCTTA TACAACATGTCATCCAACCATTGGCTTTCTAAAACCTTATTACAATGCTATCTATATGAATATTCTAAGAAAAAAATGAA AAACATTTGTCAAGTGAATCAAGAATTTCATAAAGTACAATGTTGTCTCAAGCTAATTCTGGATTTCTAAGTGCATGTTT GGTTCAGTATTGTCAAACTTGATTTTGGATATAATTGATTTCGGTAACATTGACTTTGATAAAATTGAGTTGAAAGTGAT GTGATTTATGTTTGGATACGTTCATGAGAAAAGTGGTTTCTATAGGGTAAAGATGTGAAATCCAGTTATGAAATCTCATT TATTATGTTCACCACAAAAGTTACCCTCTCTAATTTCAACGCAAAACTGATTTTGGAATTAAAATCCATTCTCCAGGTCT ATTGACAGACATCAATATTACCACCTAAAACTGATTATGGTTAATGAGAATTGATTCCAAGGCTCCCAAAGGTGTAACCA AACACACTAAATTTTTTGAACCTTTTGTATTTTTCTTATAGGGTATGTTTTTGGAGCATGGGCAAGGAAGATGGTGTCTT ATCCAGGGAACAGTGAAGAGTCTCAAAGATTAGGCCAATTAGAATTTTCCAACAAGAATTTCCCAGTTTTTGACTTGGAT GATTTATTAAGGGCATCAGCACAAGTTCTAGGAAGAGGGAACTTAGGTGTTACATACAAAGCAACACTTGAAACTGGCAC TGTTGTTGCAGTGAAGAGACTTAGCTCCATGAGTGAATTGAGCAGGAAGGAGTTTCTGCGGCAGATGCAATTGTTAGGAC AGATAAAGCATGAAAATATAGTAGAAATTATATCCTTTTATTATTTAGAGGAGCAAAAGCTGATCATATATGAACTCACC TCTGATGGCAGTTTATTTGAACTCCTACATGGTTAGTTTGATTCTTTCCTTCATTAAATTCCTAAAGAAAACCCAGAATA ACTAATCTCATGTTTGGAATTTTGGAATTAACATCCGGGTGTCGCCACCTCTGGGCTTACCCCGCGATTTTTTGAACTAA CCCAGATATTTCGTGCCCCCTCCAGCCAGTAGTACTTTACCTTACCTAGACTCGATCGCAAGACTTGAGGGCTAAGTGGC TACCAATTGAGCTTGGTACATTGAGCACACAAGTAAGGTACCAAGTTAGATGGGATCTAGTGTAAAGTACTTGCTGGAGG GGGCGAGTAAAAGCTCTACGTGTACATCCAGGGCAAGTCCAAAGGTGGGTGACACCCAGATGAACTTCTTTTTCATCAAA AATCAATTCTGCCACCTTTTAGCTATTACTCGCAGTAGCTTCTCCCTAAAATTGATTTTGACTTTAGAATCAATTGTAGA AGGATTTTAAATACACACTAAGTGTCACACTAACATTCATAATCTTATGGTTCTAGAGGGTAGAGGAGCTGGAAGAGTAT CTCTTGATTGGACCACAAGGCTAGCTATTATCAAAGACATAGCAAAAGGTCTTGCTTTCCTTCATCATTCTTTGTCTTCT CACAAGGTTCCTCATGCCAACCTCAAATCATGCAATGTCATAGTCCATCAAGATAGCCAAGGCTACCATTCCAAGCTCAC AGACTATGGCTTCTTACCTCTACTCAAAGGTAAAAAGAATGCAGAAAAGCTAGCCATAAGCAAGTCGCCAGAATTTGTTA AAGGGAATAAGAAGCTGAGTCACAAAGCTGATGTTTATTGCTTTGGTATCATCATGCTAGAGATCATAACTGGTAAAGTT CCTGGTCAAATCTTAGGAGTTGAGGAAACAACCAGTGATCTTTCAGATTGGGTGAGAACAGTGGTGAACAATGATTGGTC CACAGATATATTGGATTTAGAGATTCTAGCAGAAAAAGAAAGGCATGATGGAATGTTGGAGCTAACAGAGCTGGCTCTGG AGTGTACAGATATGGCACCAGAGAAAAGGCCAAAAATGAGTGAAGTGTTGAAGAGAATGGAAGAGATAGAGCAAATAAAA ATAGAGAATGACTAAACAAATTTAAAAGTCACTATAGCATGGTGTATTGTTTTGTATCAAGAGTACCCCATTTGTGTTCA TATATTCATCAAAACACTCAATTCAGTTGACAATGATAGATAATCTAAAGTAGAAATTGGCTCCATTACTGCATGCAAGA AGATTTTTTCATATTAGATAAAAAATTTCTTTGGGATGTTGTTATTTCCATTGTTTTTACCTTTGCATGTATTTAGTTCA GAAGACAATGAATAGTTTCACATTATATTTATAATATGTTTATCCTCTCCACTAGAAGATTCATTTCTGATACGGATAAC AGACAATCAGTTAAACTACTGAGTTTGAAGACAAAGGGGTAATTTCTGCAAGATAGTAAATGTAATGTTAAAACTCATAA AGTTTTGTTCAAGACCAGAATTACTTAACTCAATTCAAATACTTATCTGAGAATAAGCTTGTTTTCACATGG
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0170100.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTGTCTTATCCAGGGAACAGTGAAGAGTCTCAAAGATTAGGCCAATTAGAATTTTCCAACAAGAATTTCCCAGTTTT TGACTTGGATGATTTATTAAGGGCATCAGCACAAGTTCTAGGAAGAGGGAACTTAGGTGTTACATACAAAGCAACACTTG AAACTGGCACTGTTGTTGCAGTGAAGAGACTTAGCTCCATGAGTGAATTGAGCAGGAAGGAGTTTCTGCGGCAGATGCAA TTGTTAGGACAGATAAAGCATGAAAATATAGTAGAAATTATATCCTTTTATTATTTAGAGGAGCAAAAGCTGATCATATA TGAACTCACCTCTGATGGCAGTTTATTTGAACTCCTACATGAGGGTAGAGGAGCTGGAAGAGTATCTCTTGATTGGACCA CAAGGCTAGCTATTATCAAAGACATAGCAAAAGGTCTTGCTTTCCTTCATCATTCTTTGTCTTCTCACAAGGTTCCTCAT GCCAACCTCAAATCATGCAATGTCATAGTCCATCAAGATAGCCAAGGCTACCATTCCAAGCTCACAGACTATGGCTTCTT ACCTCTACTCAAAGGTAAAAAGAATGCAGAAAAGCTAGCCATAAGCAAGTCGCCAGAATTTGTTAAAGGGAATAAGAAGC TGAGTCACAAAGCTGATGTTTATTGCTTTGGTATCATCATGCTAGAGATCATAACTGGTAAAGTTCCTGGTCAAATCTTA GGAGTTGAGGAAACAACCAGTGATCTTTCAGATTGGGTGAGAACAGTGGTGAACAATGATTGGTCCACAGATATATTGGA TTTAGAGATTCTAGCAGAAAAAGAAAGGCATGATGGAATGTTGGAGCTAACAGAGCTGGCTCTGGAGTGTACAGATATGG CACCAGAGAAAAGGCCAAAAATGAGTGAAGTGTTGAAGAGAATGGAAGAGATAGAGCAAATAAAAATAGAGAATGACTAA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0170100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVSYPGNSEESQRLGQLEFSNKNFPVFDLDDLLRASAQVLGRGNLGVTYKATLETGTVVAVKRLSSMSELSRKEFLRQMQ LLGQIKHENIVEIISFYYLEEQKLIIYELTSDGSLFELLHEGRGAGRVSLDWTTRLAIIKDIAKGLAFLHHSLSSHKVPH ANLKSCNVIVHQDSQGYHSKLTDYGFLPLLKGKKNAEKLAISKSPEFVKGNKKLSHKADVYCFGIIMLEIITGKVPGQIL GVEETTSDLSDWVRTVVNNDWSTDILDLEILAEKERHDGMLELTELALECTDMAPEKRPKMSEVLKRMEEIEQIKIEND
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.30.200.20
5 109 105 8.9E-20 –
PANTHER
PTHR27008
10 312 303 2.0E-137 –
PANTHER
PTHR27008:SF352
10 312 303 2.0E-137 –
ProSiteProfiles
PS50011
34 311 278 31.552
IPR000719
PIRSF
PIRSF000654
36 318 283 8.9E-26 –
Pfam
PF00069
37 306 270 1.6E-34
IPR000719
SUPERFAMILY
SSF56112
38 309 272 5.96E-53
IPR011009
Gene3D
G3DSA:1.10.510.10
111 318 208 3.0E-37 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0170100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…