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LotjaGi2g1v0183100.4

Overview

Field Value
Gene ID LotjaGi2g1v0183100
Transcript ID LotjaGi2g1v0183100.4
Related isoforms 5
Lotus japonicus genome version Gifu v1.2
Description Protein argonaute; TAIR: AT1G48410.1 Stabilizer of iron transporter SufD / Polynucleotidyl transferase; Swiss-Prot: sp|O04379|AGO1_ARATH Protein argonaute 1; TrEMBL-Plants: tr|I1MQL3|I1MQL3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0183100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:60616893..60622467) extracted from Lotus japonicus Gifu genome v1.2.

ATGGTTAGGAAGAGGAGAACTGATGGACCTAGTGGGGGTGAAGGTTCTGAGGGCCAACACTCTCATTCTACTGAGAGGAG TGCTCCGCCTCCTCAACAGGCTGCTGCTGCACCGGGAGGAGGAGGACCGGGACCCCAAGGGGGTAGAGGTTATGGTGGTC CACCACAAGGTGGACGTGGCGGCGGCTATGGTGGTGGTGGTGGGCCGGGTTATGGTGGTGGGGGGCGCGGTGGCCATGGG GTGCCACAACAGCAGTATGGCGGCCCTCCTGAGTATCAAGGTAGGGGGAGGGGAGGCCCTTCTCAGCAAGGAGGGCGCGG TGGATATAGTGGTGGCGGCGGAGGATATGGTGGTGGCGGAGGCCGGGGAGGTGGTGGTATGGGCAGTGGCCGTGGCGTAA GTCCCTCACATGGTGGCCCACCATCTAGGCCACCAGCTCCCGAGCTGCACCAAGCAACCCCAGTTCCATATCAAGCTGGG GTGACTCCTCAGCCTCCACCATATGAGGCGAGTTCATCATCATCTCAGCCTGACGTGTCTGAAGTTGAGAAGCAGATGTC CCAGATGGTAGTGGAAACTGAAACTGTGCCTACTCCTCCTCCTGCAAGTAAATCATCTATGAGATTTCCCCTCCGCCCTG GAAAGGGTAGCTATGGCACCAAGTGTATTGTTAAGGCCAATCATTTCTTTGCGGAGCTGCCTAATAAAGATCTGCATCAG TATGATGTAAGTTCTACCTTTAATGATTGGTAATATTTGTTAATCCTTTTGTGGGTAACATGGTGCTTATATTGTTGCTG CTCTTGGTTGCTTAGGTAACTATTACTCCAGAAGTTACTTCTAGAGGTGTGAACCGTGCTGTCATGGAGCAGCTGGTGAG GCTGTACCGAGAGTCTCACCTTGGAAAGAGACTTCCTGCCTATGATGGCCGGAAAAGTCTTTATACTGCAGGTGCACTGC CATTCATTTCAAAGGAGTTCAGAATCACCCTAGTTGATGATGATGAGGGAGCTGGAGCAGCACCAAGGTTTGCTTAATGT CTATTTCCAAATGTTTCTACATGGCTTCTTACGTGTTTAATTGTTTAATTGTTTATCTTTTGATTTATTTTGAAACAGGA GGGATAGGGAGTTCAAAGTTGTGATAAAATTGGCTGCACGAGCGGATCTTCACCACCTGGGCCTGTTTTTACAGGGGAGG CAAACAGATGCTCCTCAGGAAGCTCTACAGGTTCTAGACATTGTTCTGCGTGAACTCCCCACTACCAGGTTCTTGATGTA GTTTTTAATTGTTTGTTGACTTCCTGTGTTGAACTCATCGTTCACCATGCCTGGTTTTGACACTTATGATGCTACAGGTA TTGTCCAGTGGGGAGGTCATTCTATTCACCTGATCTTGGTAGAAGGCAGCCCTTAGGTGAGGGATTGGAAAGTTGGCGTG GTTTCTATCAGAGCATTCGTCCCACACAAATGGGACTGTCCCTGAACATTGGTATGTAAATCTCATTTGTTTAGTTGGCA TTTCTTTTATTTAGCTCTAGATTCTTTGTTTCTTCATTTTCCTTGAGAAATTACTAACCAAATGTTCATGTATAGACATG TCATCAACGGCATTTATTGAGCCTTTGCCAGTCATAGAATTTGTGAATCAATTGCTGAGCAGGGATGTCTCCTCCCGTCC ATTGTCTGATGCTGACCGCGTCAAGGTCAGATTGTTAACAGCCCTTTCTGTATATCTTCATCTTTTATCCTGCAAAATTT GTCAGTACTATTTTCAATGTTAAAATCTTTACAATCTCAGTGGTCTGATAACTAAATCAGAAATGCAATAATGATATGCC ATTGTATGCTTGAAAGTCTTGTTTTTTGATGTCATTGATAATTGATGTCATTAGTTGAAATCTTTGAATGGTTTTGGTTC ACAGCGTGGCTTTTTAAGAAATGATGAGAATGGGATTGTCCTGAAACCCACAAACTAACTTCCTTTCTTAATGTGTGACA GATAAAAAAAGCACTCCGTGGTATCAAAGTTGAAGTAACACATCGTGGTAACATGAGACGGAAGTATCGTATCTCTGGTC TGACCTCACAGGCTACTAGAGAGCTGACGTGAGTAATAAGAACAGTTTTTGTTTCTAATGCTAATTATGAATTCTTTTCC TGACTTTATTTTATCAATAATTTTAGGTTCCCTGTGGACGAGAGGGGTACAATGAAGTCTGTTGTTGAATATTTCATGGA GACCTATGGTTTTGTTATTCGACACACTCAGTGGCCTTGTTTGCAAGTGGGCAATACACAGAGACCAAACTATTTACCAA TGGAGGTAGAAAAATTGAACCAATTATTAGCTGTTGGATATTACGTGGACAAGTCTGTGAGTAATTGCTTGTTTGTAATG TAGGTTTGCAAGATAGTAGAAGGCCAACGGTACTCAAAACGCCTCAATGAGAGACAAATTACTGCTTTGCTTAAAGTCAC ATGCCAGCGTCCTGTTGAGAGGGAGCGCGATATCATGCAGGTTCGAAGAATATTGTCTTAGCATTCATGTTATATATATA TATATATATATGTTTTTTTTATTGGTCATGAATAGTTTAATAATTTTTACCTTAGGACCTGGTGTTTTTTGTAATTATAT ATGTAGATTCTTAATTTGCTGATTTATTCTGTGTACTTCTGTAGCTCTTTTCATATTTTGTCAGTTTCTTGTTTGGATTT AAAGGTTTATGGTTTGATCTATTAGTTGCTTTATTCCCTACTTAATGCTTCATGCCTTTGTGCTGTACAGACTGTTCATC ACAATGCCTATCATGAGGATCCTTATGCTAAGGAGTTTGGAATCAAAATCAGTGAGAAGCTTGCTCAAGTTGAAGCTCGC ATTCTTCCTCCACCTTGGGTATTTTTTTTTGTCTCATCAATATTTTTAATTTTATTTGTTTCATTGTCTTGATTTTATTT TATGGCAATTGACATTATCTTCCTCCCCTTCAGCTCAAATACCATGATACTGGTAGAGAAAAGGATTGTCTTCCTCAAGT TGGGCAATGGAATATGATGAACAAGGTATTTTCTCTAGGCGCACTGCACTTGAACTTACTGTGGAACATGTTTAAGATTC TCTTCTCTTGAGAGGTTCTTGAGGCTTTAGAATTGAGTAAATATGTTAAGGTTAATTTTGTTTTTCTCTTGCTATATAAG TTTGAAACATCTTTTTGCTGTCTCATTATTTCAGAAAATGGTCAATGGAGGGACAGTCAACAACTGGTTCTGCATAAACT TCTCAAGGAATGTGCAGGATAGTGTTGCCCGTGGCTTTTGCTATGAACTTGCCCAAATGTGTTATATATCTGGCATGGTG TGAATAAATTCTTCTTGCTAATTTTATTTCTCTAATAGATAGTTTACTTCATTACATGATTGTTCTGGTACTTGTATTCA GGCATTCAATCCTGAGCCAGTGGTCCCCCCACTAAGTGCTAGGCCTGATCAAGTGGAGAAAGTTCTTAAAACGCGCTATC ACGATGCTAAAAATAAGTTGCAAGGGAGAGAACTGGATCTGCTAATTGTTATTCTGCCGGATAACAATGGCTCTCTGTAT GGTATGCTGTTGAACTGATCTCTGCTCACCTTCCTTTCTAGTGTTATTTTGATTGATATAATAGTGGATCTCTTCATTGT ATGATTTGGTATGCAGGGGACTTGAAAAGGATTTGTGAGACTGACCTTGGGCTTGTCTCCCAGTGCTGCTTAACAAAACA TGTTTTCAAAATGAGTAAGCAGTACTTAGCTAATGTAGCTTTGAAGATTAATGTAAAGGTTGGGGGCAGGAACACGGTTC TTGTTGATGCTCTTTCACGGCGCATTCCTTTAGTCAGTGACAGGCCTACAATTATTTTTGGGGCAGATGTCACTCATCCA CATCCTGGGGAGGATTCTAGTCCATCAATAGCAGCTGTACGTTCTTTATTTGTGTGTTTAGGCCAAGCAGTGAAAGCTTG AAAATACTTAATATTTGCCTCTTTTTTAAATCATGCTTGTTGATACTGTAGGTTGTGGCTTCTCAAGATTATCCTGAAAT CACCAAGTATGCTGGTTTGGTTTGTGCCCAAGCACATCGGCAGGAGCTCATTCAAGATCTTTTCAAACAATGGCAAGATC CAGTCAGAGGAACATTAACTGGTGGAATGATCAAGTACTCTCTGTCTTTCTCTTTCTTCATATGTTTGTTCATTAATGCA CATGCGGCATCTGATAATTCCTTGTGGTTCAGTTTTTCTAGTTTTCTTATTATATTATTTGTTTGTAGGGAACTTCTTAT ATCTTTCCGGAGGGCTACAGGACAAAAGCCGCAGCGCATCATATTTTACAGGTAGTCTTATGTTCAAGTCCTTTATGATC ATTGTGATCTTTTTATGTTGGTATATCCGTATATGATATTCTAAATTATTATTTTCAGGGATGGTGTAAGTGAAGGGCAG TTTTATCAAGTTTTATTGTTTGAGCTTGATGCTATCCGAAAGGTGAAGAATATTTTTCTTGTTTGGTCAACAACTTTGAA CAATCTTTGTTGTTATTGCTAACAATCTGTTCACCACTTCCAGGCTTGTGCATCTCTGGAGCCCAACTACCAGCCTCCTG TAACTTTTGTTGTGGTTCAGAAGCGGCACCACACGAGGCTGTTTGCCAGTAACCATCATGACAAGAGTTCTGTTGACCGG AGTGGCAATATTTTGCCTGGTATTTACTCTAATTTGATACATGGCAATTCTTGTATAATAATCTTGTTTCTCATTTCTGA TGCCAAAGAACACTACCTGTAAATGTTGCAGGCACTGTGGTGGACTCCAAGATCTGCCATCCAACGGAGTTCGATTTTTA TCTTTGTTCCCATGCTGGAATCCAGGTGATTTTTTGCCTCTTTCGTCTCTTTTAAATTGAAAGTGGATTATATTCTTATG GGAATCATGTTGGCAGGGCACAAGCCGTCCTGCGCATTACCACGTCCTGTGGGACGAGAACAACTTCACTGCTGATGGTT TACAAAGCCTTACCAACAACCTGTGCTACACGTAAGTATTAAACTAGTAATGTGATATTGGAATCTTCCCAAATTTCAAG ATATTTAATTTTTTTTTAAAAATATTTACTGCAGCTATGCAAGGTGCACACGATCTGTATCTATTGGTGAGCTTTCTTTC GAACTCTAATATTTAGTTTTGTTACACATTCAATCATTGATTTTCTACTCAATAGTTATGAAGTCTTCACTTTTATCTCC TGAAGAGTGAACACTTTACTTGAGAAGAACCAAATTTAATTATAGGTTGTTTTTGGTACCTGATTCTGTTTTATGTATGA CAATTGCAGTGCCTCCAGCATACTATGCCCATCTCGCAGCCTTCCGAGCAAGGTTCTATATGGAGCCTGAAACTTCTGAC AGTGGCTCCATGACCAGTGCTGCTGCTGGTCGCGGAATGGGTGGACGAACTACTCGGGCACCTGGTGCCAACGCTGCAGT GAGGCCATTACCTGCACTTAAGGAGAACGTCAAGAGGGTGATGTTCTACTGTTAG 

CDS sequence (LotjaGi2g1v0183100.4) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTTAGGAAGAGGAGAACTGATGGACCTAGTGGGGGTGAAGGTTCTGAGGGCCAACACTCTCATTCTACTGAGAGGAG TGCTCCGCCTCCTCAACAGGCTGCTGCTGCACCGGGAGGAGGAGGACCGGGACCCCAAGGGGGTAGAGGTTATGGTGGTT ATGGTGGTGGGGGGCGCGGTGGCCATGGGGTGCCACAACAGCAGTATGGCGGCCCTCCTGAGTATCAAGGTAGGGGGAGG GGAGGCCCTTCTCAGCAAGGAGGGCGCGGTGGATATAGTGGTGGCGGCGGAGGATATGGTGGTGGCGGAGGCCGGGGAGG TGGTGGTATGGGCAGTGGCCGTGGCGTAAGTCCCTCACATGGTGGCCCACCATCTAGGCCACCAGCTCCCGAGCTGCACC AAGCAACCCCAGTTCCATATCAAGCTGGGGTGACTCCTCAGCCTCCACCATATGAGGCGAGTTCATCATCATCTCAGCCT GACGTGTCTGAAGTTGAGAAGCAGATGTCCCAGATGGTAGTGGAAACTGAAACTGTGCCTACTCCTCCTCCTGCAAGTAA ATCATCTATGAGATTTCCCCTCCGCCCTGGAAAGGGTAGCTATGGCACCAAGTGTATTGTTAAGGCCAATCATTTCTTTG CGGAGCTGCCTAATAAAGATCTGCATCAGTATGATGTAACTATTACTCCAGAAGTTACTTCTAGAGGTGTGAACCGTGCT GTCATGGAGCAGCTGGTGAGGCTGTACCGAGAGTCTCACCTTGGAAAGAGACTTCCTGCCTATGATGGCCGGAAAAGTCT TTATACTGCAGGTGCACTGCCATTCATTTCAAAGGAGTTCAGAATCACCCTAGTTGATGATGATGAGGGAGCTGGAGCAG CACCAAGGAGGGATAGGGAGTTCAAAGTTGTGATAAAATTGGCTGCACGAGCGGATCTTCACCACCTGGGCCTGTTTTTA CAGGGGAGGCAAACAGATGCTCCTCAGGAAGCTCTACAGGTTCTAGACATTGTTCTGCGTGAACTCCCCACTACCAGGTA TTGTCCAGTGGGGAGGTCATTCTATTCACCTGATCTTGGTAGAAGGCAGCCCTTAGGTGAGGGATTGGAAAGTTGGCGTG GTTTCTATCAGAGCATTCGTCCCACACAAATGGGACTGTCCCTGAACATTGACATGTCATCAACGGCATTTATTGAGCCT TTGCCAGTCATAGAATTTGTGAATCAATTGCTGAGCAGGGATGTCTCCTCCCGTCCATTGTCTGATGCTGACCGCGTCAA GATAAAAAAAGCACTCCGTGGTATCAAAGTTGAAGTAACACATCGTGGTAACATGAGACGGAAGTATCGTATCTCTGGTC TGACCTCACAGGCTACTAGAGAGCTGACGTTCCCTGTGGACGAGAGGGGTACAATGAAGTCTGTTGTTGAATATTTCATG GAGACCTATGGTTTTGTTATTCGACACACTCAGTGGCCTTGTTTGCAAGTGGGCAATACACAGAGACCAAACTATTTACC AATGGAGGTTTGCAAGATAGTAGAAGGCCAACGGTACTCAAAACGCCTCAATGAGAGACAAATTACTGCTTTGCTTAAAG TCACATGCCAGCGTCCTGTTGAGAGGGAGCGCGATATCATGCAGACTGTTCATCACAATGCCTATCATGAGGATCCTTAT GCTAAGGAGTTTGGAATCAAAATCAGTGAGAAGCTTGCTCAAGTTGAAGCTCGCATTCTTCCTCCACCTTGGCTCAAATA CCATGATACTGGTAGAGAAAAGGATTGTCTTCCTCAAGTTGGGCAATGGAATATGATGAACAAGAAAATGGTCAATGGAG GGACAGTCAACAACTGGTTCTGCATAAACTTCTCAAGGAATGTGCAGGATAGTGTTGCCCGTGGCTTTTGCTATGAACTT GCCCAAATGTGTTATATATCTGGCATGGCATTCAATCCTGAGCCAGTGGTCCCCCCACTAAGTGCTAGGCCTGATCAAGT GGAGAAAGTTCTTAAAACGCGCTATCACGATGCTAAAAATAAGTTGCAAGGGAGAGAACTGGATCTGCTAATTGTTATTC TGCCGGATAACAATGGCTCTCTGTATGGGGACTTGAAAAGGATTTGTGAGACTGACCTTGGGCTTGTCTCCCAGTGCTGC TTAACAAAACATGTTTTCAAAATGAGTAAGCAGTACTTAGCTAATGTAGCTTTGAAGATTAATGTAAAGGTTGGGGGCAG GAACACGGTTCTTGTTGATGCTCTTTCACGGCGCATTCCTTTAGTCAGTGACAGGCCTACAATTATTTTTGGGGCAGATG TCACTCATCCACATCCTGGGGAGGATTCTAGTCCATCAATAGCAGCTGTTGTGGCTTCTCAAGATTATCCTGAAATCACC AAGTATGCTGGTTTGGTTTGTGCCCAAGCACATCGGCAGGAGCTCATTCAAGATCTTTTCAAACAATGGCAAGATCCAGT CAGAGGAACATTAACTGGTGGAATGATCAAGGAACTTCTTATATCTTTCCGGAGGGCTACAGGACAAAAGCCGCAGCGCA TCATATTTTACAGGGATGGTGTAAGTGAAGGGCAGTTTTATCAAGTTTTATTGTTTGAGCTTGATGCTATCCGAAAGGCT TGTGCATCTCTGGAGCCCAACTACCAGCCTCCTGTAACTTTTGTTGTGGTTCAGAAGCGGCACCACACGAGGCTGTTTGC CAGTAACCATCATGACAAGAGTTCTGTTGACCGGAGTGGCAATATTTTGCCTGGCACTGTGGTGGACTCCAAGATCTGCC ATCCAACGGAGTTCGATTTTTATCTTTGTTCCCATGCTGGAATCCAGGGCACAAGCCGTCCTGCGCATTACCACGTCCTG TGGGACGAGAACAACTTCACTGCTGATGGTTTACAAAGCCTTACCAACAACCTGTGCTACACCTATGCAAGGTGCACACG ATCTGTATCTATTGTGCCTCCAGCATACTATGCCCATCTCGCAGCCTTCCGAGCAAGGTTCTATATGGAGCCTGAAACTT CTGACAGTGGCTCCATGACCAGTGCTGCTGCTGGTCGCGGAATGGGTGGACGAACTACTCGGGCACCTGGTGCCAACGCT GCAGTGAGGCCATTACCTGCACTTAAGGAGAACGTCAAGAGGGTGATGTTCTACTGTTAG 

Protein sequence (LotjaGi2g1v0183100.4) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVRKRRTDGPSGGEGSEGQHSHSTERSAPPPQQAAAAPGGGGPGPQGGRGYGGYGGGGRGGHGVPQQQYGGPPEYQGRGR GGPSQQGGRGGYSGGGGGYGGGGGRGGGGMGSGRGVSPSHGGPPSRPPAPELHQATPVPYQAGVTPQPPPYEASSSSSQP DVSEVEKQMSQMVVETETVPTPPPASKSSMRFPLRPGKGSYGTKCIVKANHFFAELPNKDLHQYDVTITPEVTSRGVNRA VMEQLVRLYRESHLGKRLPAYDGRKSLYTAGALPFISKEFRITLVDDDEGAGAAPRRDREFKVVIKLAARADLHHLGLFL QGRQTDAPQEALQVLDIVLRELPTTRYCPVGRSFYSPDLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEP LPVIEFVNQLLSRDVSSRPLSDADRVKIKKALRGIKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTMKSVVEYFM ETYGFVIRHTQWPCLQVGNTQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPVERERDIMQTVHHNAYHEDPY AKEFGIKISEKLAQVEARILPPPWLKYHDTGREKDCLPQVGQWNMMNKKMVNGGTVNNWFCINFSRNVQDSVARGFCYEL AQMCYISGMAFNPEPVVPPLSARPDQVEKVLKTRYHDAKNKLQGRELDLLIVILPDNNGSLYGDLKRICETDLGLVSQCC LTKHVFKMSKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDYPEIT KYAGLVCAQAHRQELIQDLFKQWQDPVRGTLTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKA CASLEPNYQPPVTFVVVQKRHHTRLFASNHHDKSSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVL WDENNFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMTSAAAGRGMGGRTTRAPGANA AVRPLPALKENVKRVMFYC 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite 1 194 194 -
MobiDBLite 14 30 17 -
Pfam 70 178 109 5.7E-11
PANTHER 124 1059 936 0.0
PANTHER 124 1059 936 0.0
MobiDBLite 148 185 38 -
Pfam 204 339 136 4.4E-33
SUPERFAMILY 206 552 347 2.04E-55
SMART 348 400 53 2.2E-27
Pfam 349 398 50 1.9E-22
Gene3D 394 519 126 2.2E-38
CDD 400 514 115 2.15445E-43
ProSiteProfiles 401 515 115 34.195
SMART 405 537 133 8.9E-6
Pfam 406 530 125 2.8E-27
Pfam 541 587 47 4.4E-16
CDD 559 1009 451 0.0
Pfam 598 673 76 3.0E-8
Gene3D 606 757 152 3.6E-63
SUPERFAMILY 675 1010 336 3.54E-89
SMART 689 1010 322 1.2E-128
ProSiteProfiles 689 1010 322 59.098
Pfam 690 1009 320 1.1E-114
Gene3D 759 1059 301 1.2E-117
MobiDBLite 1012 1036 25 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0183100.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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