Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0185200 |
| Transcript ID | LotjaGi2g1v0185200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pentatricopeptide repeat-containing protein family; TAIR: AT1G20230.1 Pentatricopeptide repeat (PPR) superfamily protein; Swiss-Prot: sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230; TrEMBL-Plants: tr|A0A1J7HTC8|A0A1J7HTC8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0185200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:61126185..61134229) extracted from Lotus japonicus Gifu genome v1.2.
ATCTATTTCCTCTTCCATTTGTGTCTAAGCTGATGTCATCATAAAGAACAAATGAACCAGAAGTAGAACCATACCTCTCA TGCTCCTGAAACAAGAACAGAACAACCTGCGACTATGTTCCAAATCGAAACACCCAAACTCAGATAACATCATCATCATC ATTCCATCGTACCACATTGCAGCAACAACAACAGTGAGAGTGAGTAACCACTGAAACACAAAACCTTTCTCTATGTTCCC CGCCATATACAACAGCATCTCCCAATGCCTCAACTCAACCACCGCCACTCTCTTCCACGCTCGACAAGCCCATGCCCACT TCCTCAAATTCAACCTCTTCACCGACATCCACCTCACCACACGCCTCCTCTCTCTCTACGCCGACAACCTCAGCTCCTCC CAGCTCAACCTCGTACTCTCTTCCCTCCCTCAACCCTCCCTCTTCTCCTTCTCCTCCATCATCCAAGCTTTTGTCAAATC CCACCACTTCCGCCATGTCCTCGGCGCGTTCTCTGAAATGGGTTCTCGCGGCATTGTCCCTGATGGGTTTCTTCTCCCAA GTGCCATCAAGGCTTGTGCCGCGTTGCAAGCGTTGAAACCTGGGATGCAGGTTCATGGGTTTGCTTATGCTTCTGGGTTT GTTTCGGATTCGGTTGTGATGTCTTCGTTTGTGCATATGTACTTGAAATGTGACCAGCTTGGGTTTGCCCAGAAGCTGTT TGAGAGTATGCCTGACAGGGATGTGGTTGCTTGGAGTGCTATGATTTCCGGTTACTCGCGTCGTGGACTTGTTGACAAGG CGAAGGAGCTCTTTTCTGAGATGAGGAATGAGGGCGTGGAACCTAATTTGGTGTCGTGGAATGGCATGGTTGCTGGGTTC AGTGGTACTGGTTCGCATGCTGAGGCGGTGAAGTTGTTTCAAATGATGTTATCAGAAGGGTTTTTGCCTGATAGGTCTAC TGTTTCTTGTGTTCTTCCTTCTATAGGGATCTTGGAGGATGTGGTGATGGGTGCGCAGGTTCATGGTTATGTGATCAAGC AAGGGTTGGGATCGGAAAGTTTTGTGGTGAGTGCACTTCTTGACATGTATGGAAAATGCGGGCGTGAATTTGAGATGTCT CGGGTGTTTGATGAAGTGGATCAAAAAGAAGTAGGTTCTTTGAATGCTTTTCTTACTGGTTTGTCACGTAATGGTCTGGT TGACACTGCACTGGAGGTGTTTAACAAGTTTAAGGCCCAAGAAATGGAGTTGAATGTTGTGACATGGACGTCAATAATAG CCTGCTGCTCCCAGAATGGGAAAGATCTGGAAGCTTTGGAGCTTTTTAGAAATATGCAGGCTGATGGGGTGGAGCCTAAT GCTGTAACAATCCCTAGCTTAATTCCTGCTTGTGGAAATATTTCAGCATTAATGCATGGGAAGGAAATACATTGCTTTTC TCTCAGGAAGGGAATTTCTGATGATGTATATGTAGGCAGTGCATTAATAGATATGTATGCCAAGTGCGGAAGAATCCAGT TATCTCGACGTTGTTTTGATAAAATGTCAGCCCCAAATTTGGTTTCTTGGAATGCAATTATGAAAGGATATGCAATGCAT GGAAAGGCTAAGGATACAATTGAGATGTTTCATATGATGCTGCAAAGGGGCCAGAAGCCTGACCCAGTTACCTTCACATG TTTGTTGTCTGCATGCACTCAAAATGGCTTAACAGAAGAGGGATGGTACTATTTTAATAGCATCTCCAAAGAGCATGGCG TCGAAGCTAAAATGGAACATTATGCTTGCATGGTGACGCTTCTCAGTCGTGTAGGAAAACTCGAAGAAGCTTATTCTATC ATCAAGGAAATGCCATTTGAACCTGATGCTTGTATATGGGGAGCCTTGCTAAGTTCTTGCAGAGTTCACCATAATTTGAA TTTAGGTAAGATTGCTGCAGATAAGCTTTTCCTGTTAGAACCAGACAACCCTGGTAACTACATTCTTATGTCCAATATAT ATGCGTCAAAGGGTATGTGGGATGAAGTAAATAGAATACGTGATGTGATGAAAAGTAAGGGTTTGAAGAAAAACCCTGGC TGTAGTTGGATTGAGATCGGACACAGAGTACACATGCTTCTTGCTGGTGACAAATCACATCCACAAATGGAAGAGATTAT GCAGAAGTTGGATAAATTGGGCATCGAGATGAAGAAGTCTGGTTACTTCCCTAAGACTGACTTTGCTCTACAAGATGTGG AGGAGCAAGATAAAGAGCAGATATTGTGTGGGCACAGTGAGAAGTTGGCAGTAGTATTAGGACTGCTCAACACAAGTCCA GGACAACCTCTTCAAGTGATTAAGAACCTAAGAATATGTGATGATTGCCATGAAGTTATAAAAGTTATAAGCAGATTGGA AGGAAGAGAAATTTTTGTAAGAGACACAAATCGTTTTCACCATTTCAAAGATGGTGTTTGCTCTTGTGGTAATTTTTGGT GAACTGCTCGTTGTTTTCTGGTGACTTTTCTTCAAGAGGATTCAATTCTCTGCCAAGGGTCTTTCCAGTAGACATGAAAA CAGATTATTCATTAATCAATAGATGTGCATTATCAATAATTTGATGCCCATGGAGTTAGTCATCTTTAGATCAAAGATAT GTGTACTTTTGGTGACTGGCGAATAAATTGATCTTTGTGACCTCGTCGGTTTTTATTTGGGAAACCTTTTTCTTCACTCC CCTTTGTTCTTGTAGTGAAGGTTTATAGCAACCTTATGTAGAATATATGAAGGGGAGACAACTTGCAGGTCTGGATATGC TCACAGAAAATTTGAGGAACTTCAATATTTATTACTTGCCTAACTCTATTGTTTTCTTTAGGATTGATATGGAGCAGCAG TATCTAGTATAGACTATAGAGTATTATGATTTGAAGCTTTTTAATTGATGAGATTTGAAATAAACTTTGGTATTTCAGAA CCTGTTGAAATGTTAATGTTCACAGGTCTGTTACTTTGACACAAGCCCTCCTCTGTCCTTTTCAAGGCCTGGTATACTTT GATCAGCATGATTGTGGATACAGGTATGAGGAAGAATTCCTAGAATCATATACTGAATTGCCAAACCACCTGATTTCTGG CTCTCTCCAACAAGCATTTCGTGGCTAATAGATTATGTAGGTTAACTATGTCCATGTAAGTGGTAGATACCTGATTTAAC ATCAGTTGATTAATTCAAAGATATGTTAATTTGAAGCTGAGTCTTCACAGCCTCAAAATCGTTCAGTAGTTTTTTTTTTT GTTCTCTGGAGCAGCAGGGCTTGTATTTCTTCTTGTTTACATTGTTTTTGTCCAATGGGAATAAAAACTTCTCCATTGTA AATTTTACTTCTTTAACTGTGGCTTCATGTGGGTATGAAGGCACTATGTACATGTCTTATGTTTGAAATTTTAGAAAAGT GATTCTCATGCTTCTCTGCTTGTGACATTTCTGTTTTCACTTGCTTGGCTGCTACTATTATGTTTAGGGCTTTGATTCCC TTCAAAACCGTTCCAATTCAATATGTGAACATTCCTAAATGTCGGGGATGATTGCAAGTTGCAACACGCTTCTCCATAGT GGAGACAACCAAACAAGGGAAGGTTTGGTCCCTCAAAAAAAAAACTTCATGACAATATATTAAAAACAATTTTTCTGAAA TCGTTTTTAAAAATTATTTTTATTAAAGCAATTTTTTTCTTATTTGTTTGTTGTTTTAAAAATTTAAGGTAATATTTTTT TTGAACGTTAAGATAATAATATTAATTATCACTTTTTAATGTATTTGGTTTCATTTGTTTATTTTAAAAGTTTTACTAAA AATAACACATTGAATAAATAAACCAAACAATATATAATAATTTTAATATACATTACATAAAAATATTATTGTTGTTTTAA ATCGGTGAACGAAGCATCCTAATGCTAGAAGGTAGGCAATGAAGCATCCCAAATCCAACAAACTAACCACAAACCTAAGG AAAAGAAACTAGGGGATGTCCTCTCGCTGTAAATTGTCATCACGCTAAGACCAGCCTGACATATCAAGAGAATCAATTTC AAGAAACAAAACTACATTAAGTGCCCAAGGGCCTTTGTCGCAACACCTACACAAATCATGAACCATCTTCACCTCCCATG GCGAAAAAAGTGACACACTAGTATTAACCTTCTTCCCCTCAAAGCGTCACTCCAAGACTTTGTTATAACATAATCGCATG GCAACGAAAATGATGAACCAAACCCATCTATCTTCGTCGTCGAATCTTTGGCCCAGGCCTTCCGAATACTCACCTTCACA GATCAGAGGCCTAGCAAAAACAGCAAATATAACTTCACCTCCAACTTGATACCCATCCACATATCAGATAGCCTCGAAGA CTTCCTTCCTACTATAGGCGAATCTTATGAACCCAAACTAGAACTTCTGACCCTGTTTCCTCACCCGTCGAATAAAAACA TTCCTCAGCTTTCCCAAATGCTTGAAAAGACCTTGAACCCTGGTGATACCCACCCGAATAAGCAATCCCATCAATGAACA ATGATGTACACAACGAAAGTGAGACGCGTTCGACCCTAGCACTTTTCCCATCACTATCATCATCTGACTCACCTTCACCA TCATCATCCTCGATCTAGCCCACCGATCACTGTTGCCACCAGCATCTGTCTCACTTGCCACATAGCCATAAAGGCAACAA AAACATTAAGTTAATTTGAAAGACAAACTATAAAATAAAATGTTATCACACTTATTTTTACTATCTTCACTTTTTTTTTT GTTTCTATGAACTTAAATATCACCTTATTTTTTTATATTTCATTCTTTTATATTTTTTCCTCTAATATTTTTTCTCTCAT TTTTATATCTACATCCCAAACTAAGCATTTATCAGGTTTCTCACAAACACTACCCCAAACACAAACTATCTCGTTCAACC CTGGACTAGACACAACTCGTTCAAACCACCAGTTCCTAATCCCAGCCACCACTACTCCGCCGCCGTCAGTGATTCCATCG CCGGCGTCGTTTTACACCGTAGCCAGCAAAACACAAAGCGTACAACACAGCCCAAACCTCGAACCACCACCATCATCGAC CCAACTGCACCAACAGCCGTCGCAGGGTGACTCTGATCTGCCGGAGCCGCAGCCAGCTCTAGGTGCATCCACAATCACAA ATGGCACCAGGTGGTGACACGAACGACGGTGTTTTCCCAACTCCATCACGGAAGACTCAGCGGTTCACCACCTCCACCGG AACCCTAACATCACCTTCGCTCCCTTCCTCTTCCAACTCTCCCGGCGGTGACCTTCGTCCGCCGCTGACACTTCCCACAC TTCCATTCGAGCTCATGGAAGTTATCCTCTGCAGGCTTCCGGTGAAGTCTCTCTTGCGATTCCGGTGCGTCTGCAAGTCC TGGAATCTCCTGATTTCCGATCCCAAATTCGCCAGAAGGCACCTTCGCGAGTTCAACCGCTACAATCTCATTGTAAAATC CAGGAACCATGTCAACTCTTATTCACACAGCTCCACCACTTTCAACAACACAATGATTCTCAGCTCGACGCGGCTAGAGT ACCCTCTCAACCGCGATATCCGTAACGATCTCGTTGGCTCGTGCGATGGTATGCTCTGTTTCTGCGCCCCAAATGGTGCC TGTCTGGTATGGAACCCTTCTATTAGGATATCTATAGAATTGCCACCATTGGAACATATCAAGGTAGAATCGTTAGGGTT TGGTTACGATATTCTCACTGAGACTTACAAGGTGGTAATAGTTATTTTTGCTTCGAGCTACCATGCTCGTGTCGTGGTTC AAACTTTGGGTACCAATTCTTGGAGAAGTATTGAGGATTTTACTGGTCATTCCTACTTTCAGGAATTTGGGAAATTTGTT AGTGGAACAATTAACTGGTTGGCAGGTTCGTGGTCTGCCAATAATTGGTCTAACCTGTTTATTAATTCTCTTGATTTGGT GAAGGAGTCATGGTCTAAACTTTGCCTGCCTGATGTATACGACCCCACATTGGGAGTGTTGAGAGATTGCTTGTGTGTCC TTTATGAAAAGCAATTTTTTTGGGATGTTTGGGTCATGAAGGAGCATGGAAATAATGAGTCATGGACAAGATTGTTCAAT ATTCCTATTCCTGTTCACAATGGGGGTCTTGGTTATGTTCCGCGTAACCACTCACGTAATATTTCTGAGGATGATGAAGG AATAATGCTGCAATCGCTGCCTTCCTTTACTAATTTAGTTGTTTATAAGGAATATGGCTTCAATGATGATATTTTTACGA TTTTTTGTATTGGAAACAACCAAGCTAGGATGCTCCCAGAGATCTACCATGAGCCAGTGGTCTGCGCGGAGAGTTTGATA TCACCATGTTTTCAATATTAGATGTAGGTTTTATATGCCACTTGTGCATTAGGTTCTTGAAGAATCCATAAGTTGCATGG ATGTTTGTTAATTAATACTCGATGTAATATATTGCAAGTATTTGGGTTTCATAGAACTTTCATGTAAGACCTCTTTGGAT GTTGGACACTTACGTAAGGCCTCTTTTAAGAGCTTATCTAGTTCTCTACAAACCGTGTCTGTTTGTCTCCATCTTAACCT AATTTGGTTTCATGGAATGGCGTTGTTTCTGGGTTCAGTAATACTGGTTCACTTGCTGAGGCGGTGAAGTTGTTTCAAAT GGTGTTATCAGAGGGGTTTTTGTTGATGGGTCTACTGTTTCTCGTGTTCCTCCTGCTATAGGGAACTTGGAGGATGTGGT GATGGGTGCGCAGGTTCATGGAAATGTGATCAAGCAAGGTTGAAATCGAACAATTTTGCGGAAGAATCCAGCTATCTCGA CATTGTTTTGGTAAAATGTCAGCCCCAAATTTGGTTTCTTGGATTGCAATTATGAGTGGATATGCAATTTAGGTGCTTCA TATAATGCTGCTAAGTGGCCAAAAGCCTGACTCTTCATAATGTTCCATTTTAGCTTCGACGCCAGCCCTCTCCTGTTAAC CCATTTTGAGTTGGAGAGTTAATGTTGACTGTTCTGTTCCTTTGACACGGGCCCTCCTCTGTCCTTTTCAAGGCCTAATA TGCTTTGATCAGCATGATTGTGGATACAGGTATGAGGAAGAATTCGTAGAATCATATACCGAATTGCCAAACCACCTGAT TTCTGGCTTTCTCCAACAATCATTTCATGGCTAATAGATTATGTAGGTTGCTTTGAGTAGATTTTTCTTTACAAAAGAAA AGTAAACTATGTCCATGTAAATGGCAGATACCTGATTTAACATCAGTTTATTAATTCAAAGATATGTTAAATTGAAGCTG TCTTCACAGCCTCAAAATCCTCCAGTAATTTTTTTTTTGTTCTCTGGAACAGCAGGGCATGTATTTCTTGTTTGCATTGT TTTTGTCCAATGGACATAAAAACTTTTCCTTTGTAAATTTTACTTCTGTAACTGTGGCTTCATGTGGGTATGAAGGCACT TTTACATGTCTTACTAGTTTTATAAGGCACGGGGGAATTTATTCTCGATTTTTTTTTTTTTAAATTGGTTGAAATCATTT TTTAATATTTATTTATTAAAGTGATTCTCATGCTTCTGCCTGTGACATTGTGAATTTAGTGGATCATGCTAGGCAGTTTC TTGAGACTTTGCACATTTATTGCTCTGATTACTTCACCTGCTTGGGTGCTACTACTATTATTTTTGGGCTTTGATTCCCT AGTTGTGGGGTTCATTAGTAACACCAGTTACACCACCACTCCCATCTCAAATATGAGGATATTTATGTCACAATTCACAA TATATCTTTTTCTTCCCTTTCACATTTCCTTCCATTATCTCCAATATCAAACAACTAAATATAATCCTCTCAAAAACCAA AAACCATTGAGGTAGGGTTGGGTTTACTGCCAATGAGGTGAAACGAAATCAACAAGATATCCTTTATTGTTATTGTGTTT TTTTGTTTAGCGCCAAAGGGAAGGCTTTCACACTGAACATTTTCC
CDS sequence (LotjaGi2g1v0185200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCCCCGCCATATACAACAGCATCTCCCAATGCCTCAACTCAACCACCGCCACTCTCTTCCACGCTCGACAAGCCCA TGCCCACTTCCTCAAATTCAACCTCTTCACCGACATCCACCTCACCACACGCCTCCTCTCTCTCTACGCCGACAACCTCA GCTCCTCCCAGCTCAACCTCGTACTCTCTTCCCTCCCTCAACCCTCCCTCTTCTCCTTCTCCTCCATCATCCAAGCTTTT GTCAAATCCCACCACTTCCGCCATGTCCTCGGCGCGTTCTCTGAAATGGGTTCTCGCGGCATTGTCCCTGATGGGTTTCT TCTCCCAAGTGCCATCAAGGCTTGTGCCGCGTTGCAAGCGTTGAAACCTGGGATGCAGGTTCATGGGTTTGCTTATGCTT CTGGGTTTGTTTCGGATTCGGTTGTGATGTCTTCGTTTGTGCATATGTACTTGAAATGTGACCAGCTTGGGTTTGCCCAG AAGCTGTTTGAGAGTATGCCTGACAGGGATGTGGTTGCTTGGAGTGCTATGATTTCCGGTTACTCGCGTCGTGGACTTGT TGACAAGGCGAAGGAGCTCTTTTCTGAGATGAGGAATGAGGGCGTGGAACCTAATTTGGTGTCGTGGAATGGCATGGTTG CTGGGTTCAGTGGTACTGGTTCGCATGCTGAGGCGGTGAAGTTGTTTCAAATGATGTTATCAGAAGGGTTTTTGCCTGAT AGGTCTACTGTTTCTTGTGTTCTTCCTTCTATAGGGATCTTGGAGGATGTGGTGATGGGTGCGCAGGTTCATGGTTATGT GATCAAGCAAGGGTTGGGATCGGAAAGTTTTGTGGTGAGTGCACTTCTTGACATGTATGGAAAATGCGGGCGTGAATTTG AGATGTCTCGGGTGTTTGATGAAGTGGATCAAAAAGAAGTAGGTTCTTTGAATGCTTTTCTTACTGGTTTGTCACGTAAT GGTCTGGTTGACACTGCACTGGAGGTGTTTAACAAGTTTAAGGCCCAAGAAATGGAGTTGAATGTTGTGACATGGACGTC AATAATAGCCTGCTGCTCCCAGAATGGGAAAGATCTGGAAGCTTTGGAGCTTTTTAGAAATATGCAGGCTGATGGGGTGG AGCCTAATGCTGTAACAATCCCTAGCTTAATTCCTGCTTGTGGAAATATTTCAGCATTAATGCATGGGAAGGAAATACAT TGCTTTTCTCTCAGGAAGGGAATTTCTGATGATGTATATGTAGGCAGTGCATTAATAGATATGTATGCCAAGTGCGGAAG AATCCAGTTATCTCGACGTTGTTTTGATAAAATGTCAGCCCCAAATTTGGTTTCTTGGAATGCAATTATGAAAGGATATG CAATGCATGGAAAGGCTAAGGATACAATTGAGATGTTTCATATGATGCTGCAAAGGGGCCAGAAGCCTGACCCAGTTACC TTCACATGTTTGTTGTCTGCATGCACTCAAAATGGCTTAACAGAAGAGGGATGGTACTATTTTAATAGCATCTCCAAAGA GCATGGCGTCGAAGCTAAAATGGAACATTATGCTTGCATGGTGACGCTTCTCAGTCGTGTAGGAAAACTCGAAGAAGCTT ATTCTATCATCAAGGAAATGCCATTTGAACCTGATGCTTGTATATGGGGAGCCTTGCTAAGTTCTTGCAGAGTTCACCAT AATTTGAATTTAGGTAAGATTGCTGCAGATAAGCTTTTCCTGTTAGAACCAGACAACCCTGGTAACTACATTCTTATGTC CAATATATATGCGTCAAAGGGTATGTGGGATGAAGTAAATAGAATACGTGATGTGATGAAAAGTAAGGGTTTGAAGAAAA ACCCTGGCTGTAGTTGGATTGAGATCGGACACAGAGTACACATGCTTCTTGCTGGTGACAAATCACATCCACAAATGGAA GAGATTATGCAGAAGTTGGATAAATTGGGCATCGAGATGAAGAAGTCTGGTTACTTCCCTAAGACTGACTTTGCTCTACA AGATGTGGAGGAGCAAGATAAAGAGCAGATATTGTGTGGGCACAGTGAGAAGTTGGCAGTAGTATTAGGACTGCTCAACA CAAGTCCAGGACAACCTCTTCAAGTGATTAAGAACCTAAGAATATGTGATGATTGCCATGAAGTTATAAAAGTTATAAGC AGATTGGAAGGAAGAGAAATTTTTGTAAGAGACACAAATCGTTTTCACCATTTCAAAGATGGTGTTTGCTCTTGTGGTAA TTTTTGGTGA
Protein sequence (LotjaGi2g1v0185200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFPAIYNSISQCLNSTTATLFHARQAHAHFLKFNLFTDIHLTTRLLSLYADNLSSSQLNLVLSSLPQPSLFSFSSIIQAF VKSHHFRHVLGAFSEMGSRGIVPDGFLLPSAIKACAALQALKPGMQVHGFAYASGFVSDSVVMSSFVHMYLKCDQLGFAQ KLFESMPDRDVVAWSAMISGYSRRGLVDKAKELFSEMRNEGVEPNLVSWNGMVAGFSGTGSHAEAVKLFQMMLSEGFLPD RSTVSCVLPSIGILEDVVMGAQVHGYVIKQGLGSESFVVSALLDMYGKCGREFEMSRVFDEVDQKEVGSLNAFLTGLSRN GLVDTALEVFNKFKAQEMELNVVTWTSIIACCSQNGKDLEALELFRNMQADGVEPNAVTIPSLIPACGNISALMHGKEIH CFSLRKGISDDVYVGSALIDMYAKCGRIQLSRRCFDKMSAPNLVSWNAIMKGYAMHGKAKDTIEMFHMMLQRGQKPDPVT FTCLLSACTQNGLTEEGWYYFNSISKEHGVEAKMEHYACMVTLLSRVGKLEEAYSIIKEMPFEPDACIWGALLSSCRVHH NLNLGKIAADKLFLLEPDNPGNYILMSNIYASKGMWDEVNRIRDVMKSKGLKKNPGCSWIEIGHRVHMLLAGDKSHPQME EIMQKLDKLGIEMKKSGYFPKTDFALQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHEVIKVIS RLEGREIFVRDTNRFHHFKDGVCSCGNFW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 69 | 103 | 35 | 9.624 | ||
| Gene3D | 70 | 219 | 150 | 2.5E-32 | ||
| Pfam | 71 | 101 | 31 | 0.047 | ||
| TIGRFAM | 72 | 104 | 33 | 1.4E-4 | ||
| PANTHER | 109 | 205 | 97 | 2.0E-112 | – | |
| ProSiteProfiles | 139 | 169 | 31 | 7.191 | ||
| Pfam | 170 | 216 | 47 | 1.2E-12 | ||
| ProSiteProfiles | 170 | 204 | 35 | 14.261 | ||
| TIGRFAM | 172 | 205 | 34 | 3.9E-10 | ||
| ProSiteProfiles | 205 | 239 | 35 | 11.279 | ||
| TIGRFAM | 207 | 240 | 34 | 3.4E-6 | ||
| PANTHER | 208 | 333 | 126 | 2.0E-112 | – | |
| Gene3D | 261 | 399 | 139 | 5.5E-26 | ||
| ProSiteProfiles | 275 | 305 | 31 | 6.456 | ||
| Pfam | 279 | 304 | 26 | 1.2 | ||
| ProSiteProfiles | 306 | 340 | 35 | 8.265 | ||
| Pfam | 310 | 334 | 25 | 0.018 | ||
| TIGRFAM | 310 | 341 | 32 | 0.0014 | ||
| PANTHER | 339 | 389 | 51 | 2.0E-112 | – | |
| ProSiteProfiles | 341 | 375 | 35 | 12.375 | ||
| Pfam | 341 | 387 | 47 | 5.8E-10 | ||
| TIGRFAM | 343 | 377 | 35 | 5.7E-8 | ||
| PANTHER | 381 | 607 | 227 | 2.0E-112 | – | |
| Gene3D | 400 | 493 | 94 | 1.3E-23 | ||
| ProSiteProfiles | 411 | 441 | 31 | 7.267 | ||
| Pfam | 416 | 438 | 23 | 0.2 | ||
| Pfam | 441 | 488 | 48 | 1.2E-12 | ||
| ProSiteProfiles | 442 | 476 | 35 | 11.751 | ||
| TIGRFAM | 444 | 477 | 34 | 1.1E-6 | ||
| ProSiteProfiles | 477 | 512 | 36 | 8.681 | ||
| TIGRFAM | 479 | 510 | 32 | 1.3E-4 | ||
| ProSiteProfiles | 513 | 543 | 31 | 7.267 | ||
| Pfam | 517 | 540 | 24 | 0.031 | ||
| ProSiteProfiles | 579 | 613 | 35 | 8.364 | ||
| Pfam | 585 | 611 | 27 | 0.52 | ||
| Pfam | 615 | 739 | 125 | 6.6E-43 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of LotjaGi2g1v0185200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…