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LotjaGi2g1v0193000.1

Overview

Field Value
Gene ID LotjaGi2g1v0193000
Transcript ID LotjaGi2g1v0193000.1
Lotus japonicus genome version Gifu v1.2
Description Potassium transporter; TAIR: AT4G13420.1 high affinity K+ transporter 5; Swiss-Prot: sp|Q9M7K4|POT5_ARATH Potassium transporter 5; TrEMBL-Plants: tr|A0A1J7GPN9|A0A1J7GPN9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0193000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:62502894..62506813) extracted from Lotus japonicus Gifu genome v1.2.

CAGATGGTGTGGGCATGGTCATTGAGGAAGGAGAGACAGAGACATCAGCTAAGAGCCTCAAAGAGAGAAAGCTTTACCAT GTAGACTCCCTCAATGTGGAAGCTGGAAAAGTTCTCAAGACTACAAGTCACAACACCACTAAGGTATCTCTCACAACCCT CTGCCTTGCATTTTCAATTTTCTATTGTCTAACTCCTGTTTTCTTTTCTCTTGAATGTGATGTTTTATGGTAGCATTTTT TTGTTGGAGGATTTTCAAACTAAGTTTGGGCAAAAGCATCAAATTTTGTGTGGGGGGTGTTGATACATGCAAATATTATG TTTATATAATTATAAGTTTTTTAATTTCCAAATGAACAGATGAGTTGGATAAGTACTCTGAGTCTAGCATTTCAATGCTT GGGTGTTGTGTATGGTGATCTAGGCACATCTCCACTTTATGTGTTTTCAAGCATCTTCAGCAACGGTATTAGTAACAAAG ATGACATCCTCGGAGTCTTGTCTCTCATGTTCTACACCATTTTGTTGATGCCTCTGCTTAAGTATGTGTTCATTGTACTA AGGGCAAACGACAATGGCAATGGTAAGATAAATCAAATTGTCAAACTCTTATTTTCTTCTTAAAACCTCTAGCTAATTAG CTTTACCAATTGTCAACTTGGTTAAAATTCATCTATGAAAATTAATTAAAATTCTTTTGCATTAATTAGGTGGAGCGTTT GCACTCTATTCACTGCTGTGTAGGCACGCTAAGGTGAGTTTGATTCCAAATCAGCAACCGGAGGACAAGGAGCTTTCTAA TTACAAACTCCAAACACCATCTAATGAGCTAAAAAGATCCCATCAAAAGCTAAAGCAGATGCTTGAGAACAGTCATTTTG CAAAGGTTCTGCTTTTAAATATAACCATCTTGGGAACTACCATGATTATAGGGGACGGCATTTTCACTCCAGCTATTTCA GGTTAATTGTCACCTTAGATTTCGGTTTCTTGTATCTCAAGTATTCATTTATTATTATACATGTTCTCTAATTGAACTAA TTAAGAGTAGTATTAGCCTAAGAATGAAATATTTGATAAAAATTACTAATGAAATCATCTGTCATATGTTGAAATGTGCA TGCAGTTCTTTCTGCAGTGAGTGGGATCAGTACCTCATTAGGTCAAGGTACTTGAATTAATAAGCCCAAACTTTTCTTTG GGTGTTTATTGTAACTGGTGATAATTATCATATAATATGCTAATGGATATAGTTTTTGCTTACTTTTCAGGTGTTGTTGT GGAGATCACTATAGCGATATTGTTCATTCTTTTCGCTGCGCAACGGTTTGGCACTGATAGAGTAGGATTTACATTTGCTC CAATTCTTTCGGTGTGGTTTCTGTTAGTCGGAGGAACTGGTATCTACAACTTGTTCAAATATGACATTGGAGTTTTGCGT GCTGTTAATCCAATGTGCATTGTTGAGTACTTCAAACGGAATGGTAAACAAGGATGGGTGTCACTTGGAGGGGTCTTTCT ATGCATCTCGGGTGAGTCAAGTCTGTAGCCACGATTTGCACATAATTCAAATTCAAGATACATTTGATCAGAGCTTGTAA CTTCTAACTAGAATTGATTCCGGAACATGTTATTGTGGAACCAAAAACGCTATCTTGTAGCATTGCCTGTTTTTAATATT TTAAACTATCTTTTTTGAATTCTAATTATATATTTATGCATAATCATAGGATGTGAGGCTATGTTTGCTGACTTGGGTCA CTTCAGTGTACGAGCCGTTCAAGTAAGTAAATACTATATATACCTCAAGCTTCATATAAAACTGTATATTCTGAAATTGA ATTTGTTATCAATTATATTTATGTTGCAGATTAGCTTTTCTTTTGTCACATTTCCTGCTGTATTGGCCGCATATTGTGGA CAAGCAGCATATCTACGAAAATTCCCTGAGAATGTGTCCAACACGTTCTATGCTTGTATACCTCGTAAGTTGATTAATTT TTGGAAGATCCATTTACACACATCTAGAATTTCTTTTAACTTAACCAATTGTTTAATGAGTATTACTTTTTCCTGTGTGG TGAATGAAATGTAGATCACTTGTATTGGCCAACATTTGTTGTTGCTGTTGCTGCTTCAATCATAGCTAGCCAGGCAATAA TTTCAGGAGCATTTTCCATTATATCACAGGCCCTAAGCATGGGTTGTTTTCCAAATGTTAAGGTTGTGCACACTTCCACT AAGCATGAGGGTCAGGTGTACATTCCTGAGATCAACTACATGCTCATGATTGGATGCATTGTGGTCAGTGCTGCCTTCAA AAACTCAGAACAACTTAGTCATGCATACGGTAATCATGCTTAAACTCTCTCAGAGGCACACACACACAAACAAATTTTGA GCACTGCATAATATGTATGACAAGTGACCAAATGCTATATTTGATGCAGGGATTGCAATAAGTTGTGATATGATAATTAC AACATTCCTGGTTTCTGTTGTGATGTTGGTTGTATGGAAGAAGAGTATATTCTTAGTTGCTCTCTTCTATTTTCCATTCT CATTCGTTGAATTTGTATATTTATCTTCACAACTCACCAAGTTCACAAAAGGAGGTTATTTGCCTCTTGTATGTGCTTTT GTCATGACTATGGTGATGGGAACCTGGCATTATGTGCAAAAGGGAAGATACATGTTTGAACTGAAGAACAAGGTTGCCAC TGGGTATTTAAGAATGTTGGCTAATGATCCGAACATAAACCGGGTGCCCGGGATTGGACTTCTTTACTCTGAGCTTGTCC AAGGCATTCCTCCTATATTCCCACACTTCATTGCCAACCTGCCATGTGTCCATTCAGTAGTTGTGTTTGTAACCATCAAG GCAATTCCTATTAGCAGTGTTGCAATTGAAGAGAGGTTTTTGTTTCAACAGGTGGAGCCGAAAGAATACAGAATATTTCG TTGTGTTGTGAGGCATGGTTACAGAGATGTGCTTGGGGATGTTGTGGAGTTTGAGTCCCAGTTAGTGCAGCAGCTGAAAG AATTTATCAGACACGAAAGCCTTTTGCTTGAGGTAGAGGAAACAACAACAGCAGAACAAGTACCTACTCCTACCAGTGAG AGTGAGATAGAAGAAATCACAGATCAAGGTGCTTTAGCTAGGTCTCCTTCATTTTCAGATTGCATTCAATCATTGGGTAT GACCAAGGGAGTTGAAAAGGAGATACACTTTATAAAGGAGGCAATGGAGAAGGGTGTGGTGCATTTGCTGGGGGAGGCAG AGGTAGTAGCAGATCCAAAATCATCCATCTTCAATAAGATAGTTGTCAATTATGCTTACAACTTCCTAAGAAAGAACTTT AGGCAAAAGGATCTATTGGTGGCAATCCATGGCAAGAGGCTTCTCAAGGTTGGAATGACATATGAAATATGATATACATG GCATGCATTGCAGATTGTAAAATATGTGGTATGTGACAATTAAAATATGCTACTCGTTACTTCCAGATACAACTTAAACT TGAAAGTTAAATTGTATCTCTTTTAATTTTATGTGCAATTGTTTTCTGTGGACATGACACACTTGGCATTAGGATTTTTG CACTGGGCTATTTGTGGAAGGCTCATTTGCTGTTTTTTTTTTGTTATTAAAGTCTTGTGTATGACAGACTTGTTTTCTTT ATTGTCTGGAAGGAGGTTAGTAGTGCAGGGCTTATGTATTATGCGAGGTGGTGCTGTTAAGGGCTTTTAGGAATTGATGT ACTCTTTTTCCTTCAGTAGGATTTTTTTTCCCAAATGGATTTTTCCTAGTAAGGTTTTAATGAGGCGTCTTTCCTAAGTT TTGATCTTGCCCTCAAGGTTTTCAGTTTGGATTGTTACCCTATTACATGGGAGGGATTTTCCCTTGTGCTTTCATCTCTT 

CDS sequence (LotjaGi2g1v0193000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTCATTGAGGAAGGAGAGACAGAGACATCAGCTAAGAGCCTCAAAGAGAGAAAGCTTTACCATGTAGACTCCCTCAA TGTGGAAGCTGGAAAAGTTCTCAAGACTACAAGTCACAACACCACTAAGATGAGTTGGATAAGTACTCTGAGTCTAGCAT TTCAATGCTTGGGTGTTGTGTATGGTGATCTAGGCACATCTCCACTTTATGTGTTTTCAAGCATCTTCAGCAACGGTATT AGTAACAAAGATGACATCCTCGGAGTCTTGTCTCTCATGTTCTACACCATTTTGTTGATGCCTCTGCTTAAGTATGTGTT CATTGTACTAAGGGCAAACGACAATGGCAATGGTGGAGCGTTTGCACTCTATTCACTGCTGTGTAGGCACGCTAAGGTGA GTTTGATTCCAAATCAGCAACCGGAGGACAAGGAGCTTTCTAATTACAAACTCCAAACACCATCTAATGAGCTAAAAAGA TCCCATCAAAAGCTAAAGCAGATGCTTGAGAACAGTCATTTTGCAAAGGTTCTGCTTTTAAATATAACCATCTTGGGAAC TACCATGATTATAGGGGACGGCATTTTCACTCCAGCTATTTCAGTTCTTTCTGCAGTGAGTGGGATCAGTACCTCATTAG GTCAAGGTGTTGTTGTGGAGATCACTATAGCGATATTGTTCATTCTTTTCGCTGCGCAACGGTTTGGCACTGATAGAGTA GGATTTACATTTGCTCCAATTCTTTCGGTGTGGTTTCTGTTAGTCGGAGGAACTGGTATCTACAACTTGTTCAAATATGA CATTGGAGTTTTGCGTGCTGTTAATCCAATGTGCATTGTTGAGTACTTCAAACGGAATGGTAAACAAGGATGGGTGTCAC TTGGAGGGGTCTTTCTATGCATCTCGGGATGTGAGGCTATGTTTGCTGACTTGGGTCACTTCAGTGTACGAGCCGTTCAA ATTAGCTTTTCTTTTGTCACATTTCCTGCTGTATTGGCCGCATATTGTGGACAAGCAGCATATCTACGAAAATTCCCTGA GAATGTGTCCAACACGTTCTATGCTTGTATACCTCATCACTTGTATTGGCCAACATTTGTTGTTGCTGTTGCTGCTTCAA TCATAGCTAGCCAGGCAATAATTTCAGGAGCATTTTCCATTATATCACAGGCCCTAAGCATGGGTTGTTTTCCAAATGTT AAGGTTGTGCACACTTCCACTAAGCATGAGGGTCAGGTGTACATTCCTGAGATCAACTACATGCTCATGATTGGATGCAT TGTGGTCAGTGCTGCCTTCAAAAACTCAGAACAACTTAGTCATGCATACGGGATTGCAATAAGTTGTGATATGATAATTA CAACATTCCTGGTTTCTGTTGTGATGTTGGTTGTATGGAAGAAGAGTATATTCTTAGTTGCTCTCTTCTATTTTCCATTC TCATTCGTTGAATTTGTATATTTATCTTCACAACTCACCAAGTTCACAAAAGGAGGTTATTTGCCTCTTGTATGTGCTTT TGTCATGACTATGGTGATGGGAACCTGGCATTATGTGCAAAAGGGAAGATACATGTTTGAACTGAAGAACAAGGTTGCCA CTGGGTATTTAAGAATGTTGGCTAATGATCCGAACATAAACCGGGTGCCCGGGATTGGACTTCTTTACTCTGAGCTTGTC CAAGGCATTCCTCCTATATTCCCACACTTCATTGCCAACCTGCCATGTGTCCATTCAGTAGTTGTGTTTGTAACCATCAA GGCAATTCCTATTAGCAGTGTTGCAATTGAAGAGAGGTTTTTGTTTCAACAGGTGGAGCCGAAAGAATACAGAATATTTC GTTGTGTTGTGAGGCATGGTTACAGAGATGTGCTTGGGGATGTTGTGGAGTTTGAGTCCCAGTTAGTGCAGCAGCTGAAA GAATTTATCAGACACGAAAGCCTTTTGCTTGAGGTAGAGGAAACAACAACAGCAGAACAAGTACCTACTCCTACCAGTGA GAGTGAGATAGAAGAAATCACAGATCAAGGTGCTTTAGCTAGGTCTCCTTCATTTTCAGATTGCATTCAATCATTGGGTA TGACCAAGGGAGTTGAAAAGGAGATACACTTTATAAAGGAGGCAATGGAGAAGGGTGTGGTGCATTTGCTGGGGGAGGCA GAGGTAGTAGCAGATCCAAAATCATCCATCTTCAATAAGATAGTTGTCAATTATGCTTACAACTTCCTAAGAAAGAACTT TAGGCAAAAGGATCTATTGGTGGCAATCCATGGCAAGAGGCTTCTCAAGGTTGGAATGACATATGAAATATGA 

Protein sequence (LotjaGi2g1v0193000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVIEEGETETSAKSLKERKLYHVDSLNVEAGKVLKTTSHNTTKMSWISTLSLAFQCLGVVYGDLGTSPLYVFSSIFSNGI SNKDDILGVLSLMFYTILLMPLLKYVFIVLRANDNGNGGAFALYSLLCRHAKVSLIPNQQPEDKELSNYKLQTPSNELKR SHQKLKQMLENSHFAKVLLLNITILGTTMIIGDGIFTPAISVLSAVSGISTSLGQGVVVEITIAILFILFAAQRFGTDRV GFTFAPILSVWFLLVGGTGIYNLFKYDIGVLRAVNPMCIVEYFKRNGKQGWVSLGGVFLCISGCEAMFADLGHFSVRAVQ ISFSFVTFPAVLAAYCGQAAYLRKFPENVSNTFYACIPHHLYWPTFVVAVAASIIASQAIISGAFSIISQALSMGCFPNV KVVHTSTKHEGQVYIPEINYMLMIGCIVVSAAFKNSEQLSHAYGIAISCDMIITTFLVSVVMLVVWKKSIFLVALFYFPF SFVEFVYLSSQLTKFTKGGYLPLVCAFVMTMVMGTWHYVQKGRYMFELKNKVATGYLRMLANDPNINRVPGIGLLYSELV QGIPPIFPHFIANLPCVHSVVVFVTIKAIPISSVAIEERFLFQQVEPKEYRIFRCVVRHGYRDVLGDVVEFESQLVQQLK EFIRHESLLLEVEETTTAEQVPTPTSESEIEEITDQGALARSPSFSDCIQSLGMTKGVEKEIHFIKEAMEKGVVHLLGEA EVVADPKSSIFNKIVVNYAYNFLRKNFRQKDLLVAIHGKRLLKVGMTYEI 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 43 43 -
PANTHER 8 770 763 0.0
PANTHER 8 770 763 0.0
Phobius 44 62 19 -
TMHMM 44 66 23 -
TIGRFAM 52 770 719 5.7E-254
Pfam 53 623 571 7.9E-187
Phobius 63 85 23 -
TMHMM 86 108 23 -
Phobius 86 107 22 -
Phobius 108 173 66 -
TMHMM 174 196 23 -
Phobius 174 192 19 -
Phobius 193 211 19 -
TMHMM 211 233 23 -
Phobius 212 232 21 -
Phobius 233 243 11 -
TMHMM 240 262 23 -
Phobius 244 264 21 -
Phobius 265 289 25 -
Phobius 290 309 20 -
TMHMM 292 314 23 -
Phobius 310 320 11 -
TMHMM 321 343 23 -
Phobius 321 341 21 -
Phobius 342 360 19 -
Phobius 361 392 32 -
TMHMM 363 385 23 -
Phobius 393 412 20 -
TMHMM 411 433 23 -
Phobius 413 433 21 -
Phobius 434 444 11 -
TMHMM 443 465 23 -
Phobius 445 465 21 -
Phobius 466 469 4 -
Phobius 470 488 19 -
TMHMM 470 488 19 -
Phobius 489 499 11 -
TMHMM 498 520 23 -
Phobius 500 519 20 -
Phobius 520 770 251 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Potassium ion transmembrane transporter activity Enables the transfer of potassium ions (K+) from one side of a membrane to the other.
Cellular component Membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
Biological process Potassium ion transmembrane transport A process in which a potassium ion is transported from one side of a membrane to the other.

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0193000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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