Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0200100 |
| Transcript ID | LotjaGi2g1v0200100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein DETOXIFICATION; TAIR: AT5G52450.1 MATE efflux family protein; Swiss-Prot: sp|Q9FHB6|DTX16_ARATH Protein DETOXIFICATION 16; TrEMBL-Plants: tr|A0A072UM92|A0A072UM92_MEDTR Protein DETOXIFICATION; Found in the gene: LotjaGi2g1v0200100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:63756232..63758630) extracted from Lotus japonicus Gifu genome v1.2.
TGGGGTTGTCAAGTGCGCTAGACACATTTTGCGGTCAAGCATATGGAGCACAACAATATCACAAGGTTGGCATATACACA CAAAGAGCCATGTTTGTCACACTCCTTGTCACTATTCCTCAATCTTTTATTTGGGCTTACATAAAGCCCATTTTGATTCT TCTTCATCAAGACAAAAATATTGCAGCACAAGCTCAACTATTTGCTCGTTACATGATCCCAAGCCTTTCTGCCAATGGCC TTCTTCGCTGCCTTGTTAAATTCCTACAAACCCAAAACATAGTGTTCCCCATGGTGCTATCTACTGGATTTACTAGCTTA GCACATGTCCTTCTCTGCTGGACTTTTGTAATCAAACTTGGGCTTGGCATTAAAGGAGCTGCCATTGCAACTTGCATCTC AAATTGGCTTAGCATGGTCATGCTAGCACTTTATGTATGGTTCTCCCCTTCTTGCAAAAAGACTTGGGTTGGTTTCTCAT GGGAATGCTTTCATGACATCCCTCATTTTCTCAGACTAGCTTTTCCTTCAGCAGTCATGGTCTGGTATGATATTTATTTT GCTGAACCAAATTTTCTTCCATATAACATACATGGTTTGTAACATAATAGCTAGTAAACGAAATAGACATGAGACTCAAA GATGATATTTGGGAAACAATTTAATTAAACTCTTATGTCAATGAAAACTTATCACATAAACGTTTATTCATTAGCTTATT TGAAAAATTAATGAAAGTGAGAAGTTCTAAATATTGCTGCTCTATGGTACTTACTATGTTACAGCTTAGAATCATGGACG TTTGAACTCTTAGTGCTCCTAGCTGGTGCTCTTCCCAATCCAAAGCAGCAAACTTCAGTGCTTTCGATAAGGTTAGTTTA TCAATCAGATGATATTTAGTAACACACTTTTTTAAAGACTATAACGCCATTACCGTTGTGCTACGACTACGATATGATTT GGACATTATATTTCCATTTCACCTTTGGATATGTCATTTTCCTTTCCAGCATTGTTTTGATTTATCATCTCTACTTTTCT CATCCCCAGCATTACTACAACCGGGACAATTTGGATGATACCATTTGGAATCAGTGCTGCTGGAAGGTCAGTATTTCATG TTGAGTGTAGTGATTAAATTCATTCTATAAGCATCAAAAACATATAAGAAAATGTGTACACTATGATTATCACCACAAAT AATGTTGCAGTCACATGTTGTTACTTTTTATTCACCATAATGAGTCTCATTAAGTACATGTTTCCATTCAACAGCACAAG AATCTCAAATGAACTAGGGGCTGGTTCTCCAAAAAATGCACATTTAGCTGTTAAAGTCCTCTTGTTGATGGCCTTCACGG CGGGAATTATAGAATCAGCTTTTTTCATGGCGGTGTGGAAAGTTTGGCCTCGTGCTTTTACCAATGTACATGAAGTGGCC ACTTATTTGACTTCCTTGACTCCAATTGTTGCAACCTCTGTCTTTGTGGATTCAATTCAAACAGCACTCCAAGGTACAAA ATAAAAGCATCCAATAAGCTCCAATTTTTTTCATTTTTCCTTTCCCTCGTACTAGGGAGAATTCAACCTAACTTAGTTTG TAATAGATTTCGGTTGAATTCACAAAACAATACTTTTTTTTCCATTGTGAGACATGAACTAAGCTTTGCTAGCTAACTCT TAAATTGTGAATAGGTGTGGCAAGAGGATGTGGTTGGCAGAAGCTTGGTGCATTTGTTAATCTTGGGTCTTATTATTTTG TTGGTGTTCCATTTGCAGTTGTGTTTGCTTTTGTCCTCCATATGAAGGGAAAGGTATAAGATTCATTGACAATTTTGTTC ATGTTATAGTCCTGTCTATTAGTAAACTCATTGAACTGAACCTGATGAACTTGAGATTATATATCTTGATTAATTCTTCA TGAACACTACAGGGGCTAGTTTTAGGCATTGTATTAGCACTTATTGTGCAAGTTGTGGTGTTTTTTCTCATCACCTTACG CACCAATTGGGAGAAAGAAGTAAGTCCTTTTAAATTTCCAGCAATGTTAATTTCTTTCTAAATATCTGGCTTCTAACAAT AGTGTAATTATTGTTCAGGCCAAGAAAGCAGCAATAAGAGTAGGAGACAATGAAGTCCAAATGAATGCACTTCCGGGTGA CCAAAACGTTACTCCTCCAGCCTAATTTTGCTAACTCTTGGCATAATCCTAGTTATTATATGGAGCCACAACTCGGCATC AATGTACTTCAGGAAAAATGTAGAATCGTAACTATTGCTTAGCATATATAGTCTATTGTTGCAGAACTCACTGCTGAAAT TTTGTTATTTAATAAATTAGGATTTTGCTCCTATTTGACTTCCATATAACACTGCTGATTATTGGAGCTTGGAGTGCTG
CDS sequence (LotjaGi2g1v0200100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGTCACACTCCTTGTCACTATTCCTCAATCTTTTATTTGGGCTTACATAAAGCCCATTTTGATTCTTCTTCATCA AGACAAAAATATTGCAGCACAAGCTCAACTATTTGCTCGTTACATGATCCCAAGCCTTTCTGCCAATGGCCTTCTTCGCT GCCTTGTTAAATTCCTACAAACCCAAAACATAGTGTTCCCCATGGTGCTATCTACTGGATTTACTAGCTTAGCACATGTC CTTCTCTGCTGGACTTTTGTAATCAAACTTGGGCTTGGCATTAAAGGAGCTGCCATTGCAACTTGCATCTCAAATTGGCT TAGCATGGTCATGCTAGCACTTTATGTATGGTTCTCCCCTTCTTGCAAAAAGACTTGGGTTGGTTTCTCATGGGAATGCT TTCATGACATCCCTCATTTTCTCAGACTAGCTTTTCCTTCAGCAGTCATGGTCTGCTTAGAATCATGGACGTTTGAACTC TTAGTGCTCCTAGCTGGTGCTCTTCCCAATCCAAAGCAGCAAACTTCAGTGCTTTCGATAAGCATTACTACAACCGGGAC AATTTGGATGATACCATTTGGAATCAGTGCTGCTGGAAGCACAAGAATCTCAAATGAACTAGGGGCTGGTTCTCCAAAAA ATGCACATTTAGCTGTTAAAGTCCTCTTGTTGATGGCCTTCACGGCGGGAATTATAGAATCAGCTTTTTTCATGGCGGTG TGGAAAGTTTGGCCTCGTGCTTTTACCAATGTACATGAAGTGGCCACTTATTTGACTTCCTTGACTCCAATTGTTGCAAC CTCTGTCTTTGTGGATTCAATTCAAACAGCACTCCAAGGTGTGGCAAGAGGATGTGGTTGGCAGAAGCTTGGTGCATTTG TTAATCTTGGGTCTTATTATTTTGTTGGTGTTCCATTTGCAGTTGTGTTTGCTTTTGTCCTCCATATGAAGGGAAAGGGG CTAGTTTTAGGCATTGTATTAGCACTTATTGTGCAAGTTGTGGTGTTTTTTCTCATCACCTTACGCACCAATTGGGAGAA AGAAGCCAAGAAAGCAGCAATAAGAGTAGGAGACAATGAAGTCCAAATGAATGCACTTCCGGGTGACCAAAACGTTACTC CTCCAGCCTAA
Protein sequence (LotjaGi2g1v0200100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFVTLLVTIPQSFIWAYIKPILILLHQDKNIAAQAQLFARYMIPSLSANGLLRCLVKFLQTQNIVFPMVLSTGFTSLAHV LLCWTFVIKLGLGIKGAAIATCISNWLSMVMLALYVWFSPSCKKTWVGFSWECFHDIPHFLRLAFPSAVMVCLESWTFEL LVLLAGALPNPKQQTSVLSISITTTGTIWMIPFGISAAGSTRISNELGAGSPKNAHLAVKVLLLMAFTAGIIESAFFMAV WKVWPRAFTNVHEVATYLTSLTPIVATSVFVDSIQTALQGVARGCGWQKLGAFVNLGSYYFVGVPFAVVFAFVLHMKGKG LVLGIVLALIVQVVVFFLITLRTNWEKEAKKAAIRVGDNEVQMNALPGDQNVTPPA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 357 | 357 | 1.6E-191 | – | |
| Phobius | 1 | 16 | 16 | - | – | |
| PANTHER | 1 | 357 | 357 | 1.6E-191 | – | |
| TIGRFAM | 1 | 321 | 321 | 7.5E-67 | ||
| CDD | 1 | 351 | 351 | 1.2584E-131 | – | |
| Phobius | 1 | 1 | 1 | - | – | |
| Phobius | 2 | 9 | 8 | - | – | |
| Pfam | 2 | 85 | 84 | 6.0E-9 | ||
| TMHMM | 4 | 26 | 23 | - | – | |
| Phobius | 10 | 16 | 7 | - | – | |
| Phobius | 17 | 31 | 15 | - | – | |
| Phobius | 32 | 52 | 21 | - | – | |
| Phobius | 53 | 63 | 11 | - | – | |
| Phobius | 64 | 88 | 25 | - | – | |
| TMHMM | 65 | 87 | 23 | - | – | |
| Phobius | 89 | 93 | 5 | - | – | |
| Phobius | 94 | 118 | 25 | - | – | |
| TMHMM | 97 | 119 | 23 | - | – | |
| Phobius | 119 | 138 | 20 | - | – | |
| Phobius | 139 | 158 | 20 | - | – | |
| TMHMM | 140 | 162 | 23 | - | – | |
| Pfam | 146 | 309 | 164 | 1.5E-26 | ||
| Phobius | 159 | 177 | 19 | - | – | |
| TMHMM | 177 | 199 | 23 | - | – | |
| Phobius | 178 | 200 | 23 | - | – | |
| Phobius | 201 | 220 | 20 | - | – | |
| TMHMM | 219 | 241 | 23 | - | – | |
| Phobius | 221 | 244 | 24 | - | – | |
| Phobius | 245 | 255 | 11 | - | – | |
| Phobius | 256 | 278 | 23 | - | – | |
| TMHMM | 256 | 278 | 23 | - | – | |
| Phobius | 279 | 289 | 11 | - | – | |
| Phobius | 290 | 314 | 25 | - | – | |
| TMHMM | 291 | 313 | 23 | - | – | |
| Phobius | 315 | 319 | 5 | - | – | |
| Phobius | 320 | 341 | 22 | - | – | |
| TMHMM | 323 | 345 | 23 | - | – | |
| Phobius | 342 | 376 | 35 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0200100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…