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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0210500 |
| Transcript ID | LotjaGi2g1v0210500.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine protein phosphatase 2A regulatory subunit A; TAIR: AT3G25800.1 protein phosphatase 2A subunit A2; Swiss-Prot: sp|Q38950|2AAB_ARATH Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform; TrEMBL-Plants: tr|A0A0L9VHW8|A0A0L9VHW8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0210500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:65756422..65763590) extracted from Lotus japonicus Gifu genome v1.2.
GCCATGGCCATGGTGGACCAACCTCTGTATCCGATTGCGGTTCTCATCGACGAGTTGAAGAACGAGGACATTCAGTTGAG GCTCAACTCGATTCGCAGGCTCTCCACCATCGCGCGTGCGCTTGGTGAGGAGAGGACACGGAAGGAGTTGATTCCGTTTC TCAGCGAGAACAACGACGATGACGATGAGGTGCTTCTCGCTATGGCGGAGGAATTGGGGGTTTTCATCCCCTACGTCGGC GGCGTCGAACACGCCAATGTTCTGCTTCCGCCGTTGGAAACTCTCTGCACCGTTGAGGAAACTTGCGTCAGGGATAAATC GGTGGAGTCATTGTGTCGAATTGGAGCTCAGATGAGAGAACAAGACTTGGTTGAACACTTCATCCCATTGGTTAAGGTAG TAACATTGTTGCATTCAATAACCCTAAGCTTTGTGTGATTCGAATGGCGCGTGTTTGTTGTATTTATCAATTTGCTTTTG TTGTTGTGGTTTTGGATTTATAGAGGTTGGCAGCTGGGGAGTGGTTCACAGCGCGGGTTTCGTCGTGTGGTTTATTCCAT ATTGCTTACCCGAGTGCGCCCGAGGCACAGAAGGCGGAACTGAGAGCCATGTATGGTCAGCTGTGTCAAGATGATATGCC CATGGTTAGGAGATCTGCTGCCACCAACCTGGGGAAATTCGCTGCCACTGTTGAAGCTGCGCACTTGAAATCCGACATCA TGTCTGTGTTTGATGATCTCACACAGGATGGTATGTGAAAGTTGATATGACTGATTCCAGTACCCTATTGTGGATCTTTT AAATAAAATTAGGCGGAGCGTGATTATAAACACAATAGTTTTAGTGGTTATAATAAGTTCAATAGTTTTGTTGTTTAGAT AAGGTGAGGAGCCTAATATAGATAGCTGATATATTCGATGGCTGTGAATGATGTTCTAAAAAAAATCTGTCTCCTCTGAT GTTTTATAAGAATCGTATTATGAGATTTTGTGTTTGTCCGTGATCACTGCAAGTAGGTTGGGAATTTGATCTATTTAAGT TCAGAAAACCAACAGGAAGGAAACCAGAAAAGAAAAAAGAGGATTGGAATCCCATGGAGATATTTATGGAATCTTAGATA AGTTCAACTAGGTCATGTATGGTGTGAATCTGGAGGTTACTTGTTAAAATACAACACCTAAAATATTCGAAATACTCAAT TATCAGCGTCTAATAGCCTTCATCAGTTCATACTTAAAATCTGTTAACCTTAGTTTCCTTAACATTACACTTTCGGTGGT TGGTTTTTCATTTCCGTGCAGACTTTGCCTGATGAACTGGTTTTATTGTTGATATTTTTTATGAAAGAAAGAATGCACAT CTATATAATTCCAGAGAGGCAAACAAGTGGAACTTTAACCATATGAAGGAAGTTCTCAAGTGGGCATTCACATACAGAAT AATTGATTAATAAAACAACATTCTTGTTGCTACAATTTTATAAAAAAGTTGATATTTCTATTTGATATTTTTAAGACAAT GCAGCTTCAAAACCTTGACTTATTTTTGGCTCAGATGAAAGACTTAAGTTTCTTCTATTGATATAATTTCATTTTCTTGT TAGAAATTGAAGGCATTGTCAGTAGATTTGACTCACCTGTTTGATAAATGAATACAGTTTGAGTTTTTCATGCTGATTTT TAAATAGTGTTATTATACTCTTTTTACATGACCTGATGGATGTAATATATTTTAACTAATAAATTGACTCTTGGTCCTGC AGATCAAGATTCTGTTCGGCTTCTTGCTGTTGAGGGTTGTGCAGCTCTTGGAAAATTGTTGGAGCCTCAAGAATGTGTAG CACATATTCTTCCTGTCATAGTCAATTTTTCTCAGGTATATTGAACATTAGTAATTTTATGTGGGAAGATATTCATTTTG TACCCTTTGGCTTGTTGATTTACTAACACTTAAAATTTACCAAAAATTGAAGTAAAACAACAATTTTGCTTAACATTCAT AAGAGCTCCACGGTTTAACCACAGCACTTTCAAGTCTTCTTTGGTGTTAATATAGCTGTAGGTACCCTTTCTCATGAACA TATGCATGGGATTCTTATTTTTACATGCAGAGATATATCTTTCTTCTGTAGCCATTTTTTTGGCCAAGATAATGAAGGAA TGTCTTGCCTGCTGCATTAGGGATTGAACTTTAGTTAACTATGATATGAGTATATCCATAGGCTAAGCCTATGGTTTGTT CTGGCCCTCCTAGGGATGTAGCACTGTACAAATTACTGTGCTTCCAGAATTTTGGAGTAACTATTTGTTTTGTTTCTCTG GAAAAATGCATATGTAAATTGTAAAATATGAATCAGCTTAATATTTATTTATTTATTTATTTTAATATGAAGAACACATA GATAGAAAATGAACACTTGTACCGCATTTTTTTCTTGTTTTAGGTCTGGTAATATTGTTTCAAATATTGACTGCCAATAT ACGACATAGTCACAAGATTCAGCAATCGTAGTATTTGGGTAGTAGAAAGCCAACTAGAGCATAGGCTAAATTTTGCATAG ATAAGAATATTGTGATGGATGAGTGGACATGCAATAATAGGTAAGATTGTATTAGAGTGTGTGATGTAAGAGAAAATTGT GCCCAATGAGGGTATGAATGTTTTTATAGACAGTAAACTAGGCTAGTAGTGAAGTGTTGTGAAGGATAGTTTGAAGCACT TCATTGCTCTCAAGCATATTAAGTTTGTGCTTAATATACTATTCTTGACATTCCTCCTCTAGTTGTATCATAGATATTAA TCATGCCTTCCTTTGTTAAATAGCTAATCCTACTTATATGAAGTGCCTTCTTGAAGATGTCCCAACCACATGTTCTTCAA TTCTATCCTTACACATTCTATGAATATAGTAACTTAGTAAGTCCTTGCTAGATCTTTTCTCGGATGAAGTGGCAATTAGG CTCTGCAAAGTCTTGGTTTTGGACAAAACACTATGGTGTTATTTCATCTATACCAAAAGACTTTGTTGTTATTGTATGAC ATTGTGTCAAAGGGTTCTTTATATCTTCTTCATAGCTATGCATTTTGCACATGGTCTTGGGTGGTTTATTGTTCTTTGAA CCATACGCTTGTACAAGTACAACTTTTATTTAGCTATAAAGTAATATGTAAATGAGATATTGTTGGTGGAAGAATGATAA ATCTAATTACTTCAGATTAAATGATAAATTAGGAAATGAAATTACATGGTCATGCTTGAGATAATCCTCACACCCCCACG GCCACTACATATTAAGTTTTTTGACAGCTGCTTGGGTTTCCTAGTTGGCTTATGAGTAGCAACTGCACTCAGATTTATTC GATAGTTGAATAATAGAATGAGTTTAAACCTTGGGTGCGGGTCTGTAGAAGGTGTTTCTCTTGGTTGTCAAGCATGCTTT CCATGCTTATAGTCCCATCTCGCTTAATACTGGAAAACAAAAGAAAAGGTTTTATGCTGCTTGTGTTGTTTCCAAGATGA TGTTCTACATGCTTTTTACATGAGTGCTAGCAAGTAGCAACACTCGCTCCAACTCTCTCCTTTCAATGCTCTCATTATTG GTTGAAATTTATGTGGGTCCCACTAAATTGGAAGTGGGACCCACATTTTAATTGACCCCACATGAATTTCAACCAATAAA TGTGAGTGTTGGAAAGAGTTTTAAAGTGAGTGTTGTTAGCATTTTTCTAATTATATAGCTGATCACTTCTTGTTCAGGAC AAGTCATGGCGTGTCCGTTACATGGTTGCCAATCAACTATATGAGCTATGTGAAGCTGTTGGTCCTGAACCCACCAGGTA ACCTTTCCTACCTGGTAAATTATTGGTTTTATCATGACCTTCCTACGTGCTTTTTTCTGCTGATGCTATCTGAAAATCTG CTGTCAGTATGCATTTTTGAGTTAGTCGAAAAATTCTTGCTGCATGGTCAAATGTATAAAAGTTATATCTGCTTAATTTC TTCATGATCCATGACATGATTTAAAATGCATTTTGTTTTCCAGATTCTAATTGTCTGTTTATGATGGTGGTGAATTGGTG TTTTGTAGGACGGAATTGGTTCCGGCATATGTTCGACTACTGCGTGATAATGAGGCTGAAGTAAGGATTGCTGCTGCTGG GAAAGTGACCAAGTTTTCCCGCATATTAAGTCCTGAACTTGCTATTGAGCATATTCTACCATGTGTGAAGGTATACATAA CCATAGAAACATAAGATTCTCACAGGTTAACAATTATGATACACAGTTTTGATGTTATTGTTAACTGACTGATCAAGTTT GCTTGCTATAGGAGTTGTCTGCAGATTCATCTCAACATGTTCGCTCTGCATTGGCTTCAGTTATAATGGGAATGGCACCA GTGTTAGGAAAGGTATGAAGCTCTATCTAAGCACATGAGTTGTACCGACACAAAACTGAGTTGATAATACTCAGTGGTCT CTACTAACTTTTACATTCCATTAAGTAGAAATCAAAACTTTTCATCTCAGTGATCTCAGTCTCTTTTCAGAACCCCCTCC CTCCCTATTTTCATCACTTTCTCATTCATCTACTCGTCCAAGCACACTCTTGTTATGGTTTCTAGCACTCTATTACCGTG ACCTCAAACTTTTGAAACTGTTCCACTTTAAATGTAACTCAAGTCTTTTTAAAAGGAGAGGATGCATTTGTCTTCTCACT TTTACTATATTTTTGTGGTGGTTGCAGGATGCGACAATAGAGCAACTTCTCCCTATTTTCCTTTCTCTTTTGAAAGATGA GTTTCCTGATGTCAGGCTAAATATTATCAGCAAGCTTGATCAAGTGAACCAGGTTTGTTAATGGAAAATTGAATTATCTT TCAGATTGGAAATGCACATTTAAAATGTTATTACTTTTCATACATTCCCTGTATTCAAGCTTTGTTATGTACATGTTGAT TGCAGGTTATTGGTATTGATCTGTTATCCCAGTCTCTGTTACCAGCTATTGTTGAGCTTGCTGAGGATAGGCATTGGAGA GTTCGACTTGCTATCATAGAATATATACCCTTATTAGCAAGTCAGTTGGGTGTAGGTTTTTTTGATGATAAGCTTGGAGC TCTCTGCATGCAATGGCTAAAGGACAAGGTTTGGGAAGCAACTAAACTTAATTTCCAATTTATTCTACTCGTCTTGTTTA TGAAGTCCATTTTATTAAAACATTGAATTATTCAGAGGCTTGTTTTATGCTAAAGCTATTATTATTATTGTAATCGGACG CGTTCCCATTTTATTTGATATTTGGATATCTCTAATATGAGTGATATTCTTCTTCAAAATTAAATTTTTCAATGCTGTTT TTTTTTTATACTGTGGTGCCTCTTAGTACTTGGCTTTGACTGGGTGCTTATATCTGATATGCATTTGAAAATGTGGCTTT TTAGCTGATCTGGTGTAACAGATCTTCATTTTAGAATGCTAAAAGACCAAAATGAAATGTTAACCGGGGAGTTATTTTCT GTTTGATATGCAATACACAAAGTTATTAGTGATTTAGGCTGTCAAAGTACTCGGAAATAGCTCAAAGGGTAAATAAAGCT TACAAGTCCTGTGTTTGATCAAAGATTTAAATTAACCTCTATTGACTCGGTCAATTATAAAAGTTTTAAAACTTTTCTAG TCAAGAAACTTGCTCAGCTTTAATTTCATTGCTCTTCTACTTTTACATTACTATTCCGAGTAAACATATTGACTTCCTCA ATTGTATTTCTTATGGTTGTAGGTATACTCAATCCGTGATGCAGCTGCTAATAACGTGAAACGCTTAGCAGAAGAATTTG GACCAGATTGGGCAATGCAGCACATTATTCCCCAGGTTTTTAGCTCATGTTTTGTTGATGTCCATCAGCTGTACATTTCA CCTAAAACTATAGAAAATGATTCTAATACCAGTGATATCATAGAAAACCCTCTAAACCAATGCTTTGAAAATGTTGACTC GAACTTGTGTAGCCTCTGTGAACAGTGAGCAAAAAGTTTGGGTTTCATGATACATTTTATAATTCTTAAAGAAAAATAAA GTAAGTATACAAAAATGATGTAAAGGTGTTGTAAGCTGCAAAAGCAGTTATTTAAGGGATGTTCTGAATTGAGGAAAGTG GCATGAAGAAGTATCGACTTCAAGTTCTCTGAGAATTTTCTGATGTCTCAATTGACACTTATCTTATGATTGTATGGTTG TTCAAAATACGTCCTGAATGTTTTTGCTAAATACAATCACTGTGGTATTCAATTTATCTAAAATAATATCTTAAGCTTTT ACAGGTTTTGGACATGATTAACGATCCACATTATCTGTATCGAATGACAATTCTACAAGCAATTTCTTTATTAGCTCCTG TTCTGGGCTCAGAGATTACTTCTTCAAAACTGCTCCCTCTGGTTGTAAATGCGTCTAAAGATAGGTAAAATTGCTTAGCC CCCTTCCTGTTACATGTCTTTATTTAAACTAGTGCTCATAGGTCATAGCATTGTTTTGCAGGGTCCCCAATATCAAATTC AATGTAGCAAAAGTTTTGCAATCTCTCATTCCAATTGTTGAGGAATCTGTAAGTAGCTTCCATCTAAGATTTCATCTTTA ATACACTTCCCCCTGTTGCTCCGATTATAATAAATAGTATATTGATTTCTAGAATGGTATCTTTATAATAATTCAGATTA GCGGTACAATGGTATTAATTTGTCCTAGAAATATTGAGATTTTGATTGTTGTGGACTGGAATTCATTTTATGCTACTTTG AATTAGTTTTTTGTTGAATTCTTTTCTCGAAAAGAAATTTCAGACTTATTACTTGCTGAACTAGCTTAGCTTAACAAAAC CAGTTAGCTAAAAGCTAAGATGGCTGTTTGGTAATGACATCACTTTGGAAAACTTTATCCTAGTTGTTTTCACCATACTT TCGTTGGGTTTTCAATAAAGCTTGTAGTAGTAAGGAATAATTTGACAAACATTATTATTTGATAACTAATACTCATTTGA ACAATGAAGGTTGTTGAGAATACCATCCGTCCCTGTCTGGTTGAGCTAAGTGAGGATCCAGATGTTGATGTTAGGTTTTT CGCCTCTCAAGCACTACAGTCTAGTGATCAAGTCAAGATGTCCAGCTAG
CDS sequence (LotjaGi2g1v0210500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCATGGTGGACCAACCTCTGTATCCGATTGCGGTTCTCATCGACGAGTTGAAGAACGAGGACATTCAGTTGAGGCT CAACTCGATTCGCAGGCTCTCCACCATCGCGCGTGCGCTTGGTGAGGAGAGGACACGGAAGGAGTTGATTCCGTTTCTCA GCGAGAACAACGACGATGACGATGAGGTGCTTCTCGCTATGGCGGAGGAATTGGGGGTTTTCATCCCCTACGTCGGCGGC GTCGAACACGCCAATGTTCTGCTTCCGCCGTTGGAAACTCTCTGCACCGTTGAGGAAACTTGCGTCAGGGATAAATCGGT GGAGTCATTGTGTCGAATTGGAGCTCAGATGAGAGAACAAGACTTGGTTGAACACTTCATCCCATTGGTTAAGAGGTTGG CAGCTGGGGAGTGGTTCACAGCGCGGGTTTCGTCGTGTGGTTTATTCCATATTGCTTACCCGAGTGCGCCCGAGGCACAG AAGGCGGAACTGAGAGCCATGTATGGTCAGCTGTGTCAAGATGATATGCCCATGGTTAGGAGATCTGCTGCCACCAACCT GGGGAAATTCGCTGCCACTGTTGAAGCTGCGCACTTGAAATCCGACATCATGTCTGTGTTTGATGATCTCACACAGGATG ATCAAGATTCTGTTCGGCTTCTTGCTGTTGAGGGTTGTGCAGCTCTTGGAAAATTGTTGGAGCCTCAAGAATGTGTAGCA CATATTCTTCCTGTCATAGTCAATTTTTCTCAGATATTAATCATGCCTTCCTTTGTTAAATATCTTGGTTTTGGACAAAA CACTATGGACAAGTCATGGCGTGTCCGTTACATGGTTGCCAATCAACTATATGAGCTATGTGAAGCTGTTGGTCCTGAAC CCACCAGGACGGAATTGGTTCCGGCATATGTTCGACTACTGCGTGATAATGAGGCTGAAGTAAGGATTGCTGCTGCTGGG AAAGTGACCAAGTTTTCCCGCATATTAAGTCCTGAACTTGCTATTGAGCATATTCTACCATGTGTGAAGGAGTTGTCTGC AGATTCATCTCAACATGTTCGCTCTGCATTGGCTTCAGTTATAATGGGAATGGCACCAGTGTTAGGAAAGGATGCGACAA TAGAGCAACTTCTCCCTATTTTCCTTTCTCTTTTGAAAGATGAGTTTCCTGATGTCAGGCTAAATATTATCAGCAAGCTT GATCAAGTGAACCAGGTTATTGGTATTGATCTGTTATCCCAGTCTCTGTTACCAGCTATTGTTGAGCTTGCTGAGGATAG GCATTGGAGAGTTCGACTTGCTATCATAGAATATATACCCTTATTAGCAAGTCAGTTGGGTGTAGGTTTTTTTGATGATA AGCTTGGAGCTCTCTGCATGCAATGGCTAAAGGACAAGTTCATTGCTCTTCTACTTTTACATTACTATTCCGAGTAA
Protein sequence (LotjaGi2g1v0210500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAMVDQPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDDDEVLLAMAEELGVFIPYVGG VEHANVLLPPLETLCTVEETCVRDKSVESLCRIGAQMREQDLVEHFIPLVKRLAAGEWFTARVSSCGLFHIAYPSAPEAQ KAELRAMYGQLCQDDMPMVRRSAATNLGKFAATVEAAHLKSDIMSVFDDLTQDDQDSVRLLAVEGCAALGKLLEPQECVA HILPVIVNFSQILIMPSFVKYLGFGQNTMDKSWRVRYMVANQLYELCEAVGPEPTRTELVPAYVRLLRDNEAEVRIAAAG KVTKFSRILSPELAIEHILPCVKELSADSSQHVRSALASVIMGMAPVLGKDATIEQLLPIFLSLLKDEFPDVRLNIISKL DQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLKDKFIALLLLHYYSE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 468 | 468 | 8.1E-290 | – | |
| PANTHER | 1 | 468 | 468 | 8.1E-290 | – | |
| Gene3D | 2 | 470 | 469 | 3.2E-191 | ||
| SUPERFAMILY | 8 | 466 | 459 | 3.73E-73 | ||
| ProSiteProfiles | 10 | 48 | 39 | 9.899 | ||
| ProSiteProfiles | 164 | 202 | 39 | 9.0 | ||
| ProSiteProfiles | 203 | 241 | 39 | 9.477 | ||
| ProSiteProfiles | 254 | 298 | 45 | 10.405 | ||
| ProSiteProfiles | 299 | 337 | 39 | 13.243 | ||
| ProSiteProfiles | 338 | 376 | 39 | 11.922 | ||
| ProSiteProfiles | 377 | 415 | 39 | 12.765 | ||
| Pfam | 379 | 463 | 85 | 4.6E-8 | – | |
| ProSiteProfiles | 416 | 454 | 39 | 11.669 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0210500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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