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LotjaGi2g1v0221200.3

Overview

Field Value
Gene ID LotjaGi2g1v0221200
Transcript ID LotjaGi2g1v0221200.3
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Protein kinase family protein; TAIR: AT4G28880.1 casein kinase I-like 3; Swiss-Prot: sp|Q93Z18|CKL3_ARATH Casein kinase 1-like protein 3; TrEMBL-Plants: tr|I3S653|I3S653_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0221200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:67648760..67654962) extracted from Lotus japonicus Gifu genome v1.2.

GTGAGTGAAAGAAAGAAAGAAAGAAAAGACTTGTATTTCAACGTTCTCTCTCTTTCGATTGAACTCAACTGAAGTTTCCC GGTGGCGCTACCACAACCTACCCCGATTGGAGTTGGACTCAGTACAGACATGGAACGCATCATCGGCACCAAGTACAAGA TGGGTCGCAAGATTGGAAGTGGATCCTTCGGTCAAATCTACCTCGGTCTCTTTTTCTCTCTCTATTTCTCCATTTTTCTT CAACTCTTTAATTTGGAAGTGTGTTCTTATTGCAATTCAATTTGATTTTTGCAGCTACTCATATTGATACCTTCGAGAGC GTAGCTATCAAGATCGTATGTTTCTTCCCCTTCCTATATAATTTTTTTTTTGAATTGTTTAGCTCAGTTTTGAGTTTTAG TTTCATTTTCTTATCTTTATTGATTGTTGCCAATTCAGATTCTCAAGCACTCTAACTTTTTTAGTTGATTGTTTGGAGAT TTTCGCAATCGGCTGCATGTTATGCAGCTGCTATTTAGTGATGCTGTGTGTTCTTGTAATGTTGATTGTTTGATGTATTG TGTATGGGGTGGCAAAATGAGCTGAATATTAGCATCTCTTGGCTGAATATTGGTATAATACCGATTATCACTCGGCTATA AACATGGCTCCATTTGAAGCTCTTTTTGGCGGCCCACTTCATTAGACAAAATCCTTATGTGGCCAGAGATTCATTAGTAG ATGCTATTGACTGCGCCTTGTATGCAAGTGAGCATATGCACAGCCACTCCGGCATAATCTTCTACACCGCAGTCCCACGC GAAGTTTTATGCTGATAATAAGAGAATGGAAAGGCAGTTTGAAATGGGAGATTGGGCTAATTTGAAGATGTAGTCATATA GACAGCCTTCGTTGCGTAATGGTGCTTTTCATAGGGTCTTAACCAAGTATTATGGCCTTTATAGGGTGAGGGCTGAGATT GGTACTTCTATGGCAATCAACTGCAACTTCCTAAAGGCTCTAAAATCCATGATGTGTTTCATGTTTCCGTGCTGAAACAA CATTACGGTAGCCATCCTGTTCCACTTACCATGCGTGCCCATTATCAGATATTATACCCATGGTTCTAGTTGCTAATGTA GGAAGCACATGATAGAAGTAATAATTCATTGGAGCTACACTGACCCTTCAGTTGCTACATGGGTGGAGCTTCAATATTTC AAAACCAGTTTCCAAACTTTGATACCAGCCTTGAGGCCAACTACACAATTGCCAATCCTGAGGACAAGGATATTTGAAAT GGTTTGGTTTTATGCGGTTGCTAATTAGCGATATGGTGTATTTTGGTAATGTTGATTGTTTTGTGTAATTGTGTACGGGC AGCAAGCTATTAGTGTAAAGAAACTAATTCTGTTAGGTTAGATCTTTGACGGTAAAATGGACTCTGCTAGAAAAGCAGGG TAATTACTGAAATTGTAGTGTAATGATTCATCATAAACATTGCTTAGTTTACGAAGACTAATCCACGTTGTGGGATTCTC TTTAATAAGGAAGCACTTTGAGCGAGTGTGCTTTCATTTGATTGGTACCAAATTTTCACTTGATTGATACCATTTTGTGT TGCAGGAGAAGAAAGACACAAAACATGCACAGTTGCTTTATGAGGCCAAGCTATACAATATTCTCCAAGGAGGAAGTATG CATTTTCTTTTTTATATTAACTTTAAGCAATTATTATTATTACAATTATTATGTGTATGTGCATGTCAGTCAGCGAGTGA ATTGGTGTATCAGTTTGGAGGTGAAGGCTATTAGGATATTGGTGAGTTGAAGATTTTGGATTTTTTTATGTAGGTGGCAT CCCAAGTATAAAGTGGTGTGGTGTAGAGGGAGAGGACAACGTGCTTGTTATGGATTTGCTGGGGCCTAGTCTTGAGGATC TTTTTGTGTACTGTGGAAGAAAGTTTTCTCTCAAAACTGTATTGATGTTGGCTGATCAAATGGTAATCTTCATGGATTCA GCTGAACGGAAGGGGAAAATACTCTTTAAATTCACCTATCTTAGCCTTACTCTGTTATTTGGTCCTGCAGAAAATTTGTT GTCACCGTGTTATAAATCTTTTTGTGTGTTTAAGTTGACATTTGACATTAGCTCTTATTTATTTATTTTTCATGTAGATA ACCAGAATAGAATATGTGCATTCTAAAGGATTCCTACATAGGGACATAAAACCTGATAACTTCCTCATGGGACTTGGTCG GAAGGCAAACCAGGTGACCATCCTGTTGAAGTTTCCCTTGATTTTGATTTGACTGATCCTGTCATTCTTTCAACTTTTTG TTGGCACAACTTACAGTGTTGTACATGTATATTTGGGTTGGAAATGTCAGGTTTATGTAATTGATTTTGGGCTTGCAAAA CGATATCGGGACTCCAGAACCAATTGCCACATCCCTTACAGGTATCTAACTTTCTACTGTAGCATTCCATTGACTTATTC ATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCACCCCTTTTCTTTCTGGGTTTGATGTATTTGTTTGATATTTCT CGCTTCTGATTTTGAATTTATTTTCATATCCCAACCAATTCATCATCAGTTAATTAAACTTGTTTTTTGAGAAGATTTCT TTCCTTTTTCTCTTCTTTTCTCATGCCCTGGATATTCCCCAAATTAGTAACTAATCAACTGTTCCACTCAGGGAGAACAA AAGCTTAACAGGGACTGCACGTTATGCAAGTTGCAATACTCATCTTGGAATTGGTACGTTAAAAATTAGTTAAGCCTTTC ATTCCAAATAAAATGCAATTATTTTCTTTAGCCTTTTCTTTATGTTATTTTCTATTTTATTTATAGAGCAAAGCCGACGG GATGATTTGGTATCACTAGGATATGTGCTTCTGTATTTCCTCAGAGGAAGGTAGGACATGGTTATCTTGCTTCTATTCTT CTTCCATTAGCATTTATTGTATCATCTATTGAAAGCAATATAATGAGATGTTCTAGCTTTTACATGACTACTTGCATTTA GCCTTCCTTGGCAAAACCTAAAGGCCGCAACAAAGAAGCAAAAGTATGATCAAATATGTCAGAAGAAACTAGCAACTCCT ATTGAGGTAAGTGTTTGGACAATTATCTGTCTTGAAGGGTTTTGATCATGAGTCTTATTTGTTTGTTGTTTTCCATAGGT ATTGTGCAAATCTTATCCTGTAGAGTTTGCTTCATACTTCCACTACTGTCACTCTCTGACCTTTGATCAGCGACCTGATT ATGCATTCTTAAATCGCTTATTTCGGGAGTTATTTTCTCGGGAAGGTAACTATTTTGTTCTTTCTGCAATCTTTATATAA TTATATTCTACATACATATTGTTTAGTTGTGTGTGCTAAAAAACACTAGCCATGCTCAGTTCAAATCATGAAGAAAGATA TGGTATTAAATGGACCTTTGATTTTTATTGACATAGATGTTCTTTCGTTATGCAAAATTTTATATTCAGTTGTGGTGAAG TTAACAATGTTTGTCATTTTTTCATATCTTTACTATATGTAACTTGACTCTCCATTCTCTCCTTGTCGGTATATGACAGG TTATGAATTTGATTATGCATTTGATTGGTCTATTTTAAAGTATCAGCAGGCACAACAGAATAGAGTCCAGCCTCGTGTAA CTGTAAGTATATTAGATAGGTAGATAGATAAGTGGGAGTTAGAGTCTTCTCATGCTTCTGAAAGTACTAATTTTGTCATA TTGCAGCCGGTTCCTAGAGCAAGCAACAATCGTGCAGTGCCCATGAATGTTGGCAACTATCAAGGTTGGTACTTCTCAAA TTAGTTGTATCATTTTTTATTTGCATTGCATACACAAATGTCTTGTTCATTTTTACTGATTGTCCAGAATTAATGTTTAT TCAGGGGATGTCTCAGCAGAGCGCATTGAATCAGGCAATGCTACTGGGTCTGGTGTTAAAACTCAATTTAAATCACAAGT CGGTAAAACTTTGGGTTCTGAAAATCATCTTGACAAGAATGTAAGCCATCTTAAGAGTAAAAACTTTTGATTTCTTGCTA TACCTTTGATGCAACACTGAATCACAATACTTTGGTTGCACACTATTATGTTTAAAATTTATGAAATAAACTAGTGTTTA ACGAGCATTATTAATTTTTTTTAGATTTTCAGTGGAGCAAATATCCCCTCTACCTCGTACTCTCTTGCTGGTACCTCAAA AAGGAACTCCTTGAAGCCTGCCCTGTCGTCTGAAGCTGTGAACCCTGGACCTGGGCAAGGCAGTAGTAAAATGGGCCCTT CAAGTAGCTGGATTTCATCTCTGCATCGCAGATCTTCTGCCAAATGAATGCCCGGTATGGTAATTTTCTGGTTTATAATG CCTGTGATGCAGTGAGCATTATTGTCTAAATGCCCCACTTCTATCATTGACAATTTTGTATTATTATGTTTTTCCAGCTG TGGTCTGATCAAGAAGATACTCTGTACACATACGTGAAGCTGCAAATTCGTGGCGTATTGCTTGCATCTCTTTCCTATGT AGATGGTGAAGAATGTTTGAGTGGTCTATCCACGGAGACTGCAAATGAGCTGCAAGGTTTATAAATTTCATATCTCATCT TGAGGCGAGCTTGTCTTGCTTTTTTCCTAAGGTGACTGCAAACTATTGTTTGGTACAAAATACAAACTACCCAGGCTTGG CTGCTTTGCTGTGGTTAGATTTCAAACATGGAACACAGCAATCTTGTGTATCTATGTTCTTATGTAAAATTATTGTGTGA TCGTAGCCTAATTTGACCGTTTTGTTCCTTGATGATTCGTGCCATATGACAAGTGGTGAAAGTTTCGGTTTAAATCGATT GATATTATGCATTGCAGGTGTATTTTCAATTGCCTCTGTTAAGGTACATTTGATTTCAGTTTTTTGCCTTTTTGTTGCTT GCTTATTTTTAGCAGAACAATTTAAGTTGGTTTTTAGTGGCATCGATCTAACACTTACGATTGCTTAGTGTGATATGCTT GGCTATGAGCTCACTTATTATTGAGATCTGTGTTCTGTTTTGGTCTAAATCTTGTTATTCAAGAAAAGTATTCATTCTCC TGCCAATGTCAAATTCTGAATTCTGTAAAATTATGTACAGTGGAATAATGAGAGATTTATTGCTTTAGATTTCCTTATCA TTCCTTTTAAATTTTTCAATTCGATCGTGATGCCTGAATTTTGACTTTTGTAGGTAGCTCGAATTTGATGGTCAGCTTGA TTAATTTGCTTTGTCTGTCATTCTTGGGATGAATGAGTTCAATCTGATTGTATTGCAATGTAGTTGAAGGTTTGGAGAAG CTGTTATTGATTTGATGTTGCTGTGGTAAAATTAATTGCAAATGATCAGCTCAGTTATCAGGTTACACTTCTTATTTTGC AGGGTTTCCCTTTTCAACTCTAAAGGATTCATATGACAGAAAATTGGCATTTATATGGATGTCATTATCAACTGAAACAT ACCTCTCCATACAGATTGGATCCTCATATAGCACATTGCTGGAAATGTGAATTGTTTGCCAGAACAGCAAACTTCAAAGA CTTCTATGCGATATGTGGGCATAATTGGTTTATAAAAACTTTATGGGCCCTTGAGAGTTAGTGCCTTTTTGTTTCTGCGT CGGCAAGGCGTTGGATGTGAGTATGGGGAGAATCTTCAATGTGGAGCGATGGAAAGAACATGCTATGGACTCCTGCAACA CGTACGCAAACAGACCCTATGCTATGGACTCCTGCAACGCGTATGCAAACGGACCCTTATTGTTCGCTTGTGTGAGCATC TTGAGCAGCAGACACACGTAAACCTAGAATCAACTATAGAGGGGACGTGAACTCAAACACTCCCTTAATATACATATAAA GGGAGATATAAATTTTACATCACAAGGTTTAAAGTTTAATCTATAAGTACCCGAGACAATCATGGGCAAGTCGGGTATAA CCACTATGGGTGGGAAAGCACTCCCTATCAAGTATTTAACCAAGTTCTATTCAAAGCGACCTGAACTTAAGACATATTTA AATTAGTGCATGTTAGCTGATCTCTGTTTGGTGGTCATTACGTGACTTAAGAGAATTCATTCCCTTATTAATAACACAAC GACATTAAAAATGTACTCCCTCCGTTCTAAAATGTAAGTTGTT
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0221200.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAACGCATCATCGGCACCAAGTACAAGATGGGTCGCAAGATTGGAAGTGGATCCTTCGGTCAAATCTACCTCGCTAC TCATATTGATACCTTCGAGAGCGTAGCTATCAAGATCGAGAAGAAAGACACAAAACATGCACAGTTGCTTTATGAGGCCA AGCTATACAATATTCTCCAAGGAGGAAGTGGCATCCCAAGTATAAAGTGGTGTGGTGTAGAGGGAGAGGACAACGTGCTT GTTATGGATTTGCTGGGGCCTAGTCTTGAGGATCTTTTTGTGTACTGTGGAAGAAAGTTTTCTCTCAAAACTGTATTGAT GTTGGCTGATCAAATGATAACCAGAATAGAATATGTGCATTCTAAAGGATTCCTACATAGGGACATAAAACCTGATAACT TCCTCATGGGACTTGGTCGGAAGGCAAACCAGGTTTATGTAATTGATTTTGGGCTTGCAAAACGATATCGGGACTCCAGA ACCAATTGCCACATCCCTTACAGGGAGAACAAAAGCTTAACAGGGACTGCACGTTATGCAAGTTGCAATACTCATCTTGG AATTGAGCAAAGCCGACGGGATGATTTGGTATCACTAGGATATGTGCTTCTGTATTTCCTCAGAGGAAGCCTTCCTTGGC AAAACCTAAAGGCCGCAACAAAGAAGCAAAAGTATGATCAAATATGTCAGAAGAAACTAGCAACTCCTATTGAGGTATTG TGCAAATCTTATCCTGTAGAGTTTGCTTCATACTTCCACTACTGTCACTCTCTGACCTTTGATCAGCGACCTGATTATGC ATTCTTAAATCGCTTATTTCGGGAGTTATTTTCTCGGGAAGGTTATGAATTTGATTATGCATTTGATTGGTCTATTTTAA AGTATCAGCAGGCACAACAGAATAGAGTCCAGCCTCGTGTAACTCCGGTTCCTAGAGCAAGCAACAATCGTGCAGTGCCC ATGAATGTTGGCAACTATCAAGGGGATGTCTCAGCAGAGCGCATTGAATCAGGCAATGCTACTGGGTCTGGTGTTAAAAC TCAATTTAAATCACAAGTCGGTAAAACTTTGGGTTCTGAAAATCATCTTGACAAGAATATTTTCAGTGGAGCAAATATCC CCTCTACCTCGTACTCTCTTGCTGGTACCTCAAAAAGGAACTCCTTGAAGCCTGCCCTGTCGTCTGAAGCTGTGAACCCT GGACCTGGGCAAGGCAGTAGTAAAATGGGCCCTTCAAGTAGCTGGATTTCATCTCTGCATCGCAGATCTTCTGCCAAATG A
Download CDS Sequence

Protein sequence (LotjaGi2g1v0221200.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MERIIGTKYKMGRKIGSGSFGQIYLATHIDTFESVAIKIEKKDTKHAQLLYEAKLYNILQGGSGIPSIKWCGVEGEDNVL VMDLLGPSLEDLFVYCGRKFSLKTVLMLADQMITRIEYVHSKGFLHRDIKPDNFLMGLGRKANQVYVIDFGLAKRYRDSR TNCHIPYRENKSLTGTARYASCNTHLGIEQSRRDDLVSLGYVLLYFLRGSLPWQNLKAATKKQKYDQICQKKLATPIEVL CKSYPVEFASYFHYCHSLTFDQRPDYAFLNRLFRELFSREGYEFDYAFDWSILKYQQAQQNRVQPRVTPVPRASNNRAVP MNVGNYQGDVSAERIESGNATGSGVKTQFKSQVGKTLGSENHLDKNIFSGANIPSTSYSLAGTSKRNSLKPALSSEAVNP GPGQGSSKMGPSSSWISSLHRRSSAK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11909:SF97
1 409 409 1.3E-199 –
PANTHER
PTHR11909
1 409 409 1.3E-199 –
Gene3D
G3DSA:1.10.510.10
1 328 328 8.5E-110 –
SUPERFAMILY
SSF56112
5 290 286 2.97E-84
IPR011009
Pfam
PF00069
9 228 220 6.1E-29
IPR000719
SMART
SM00220
9 277 269 3.8E-14
IPR000719
ProSiteProfiles
PS50011
9 277 269 29.898
IPR000719
ProSitePatterns
PS00107
15 38 24 -
IPR017441
ProSitePatterns
PS00108
124 136 13 -
IPR008271
MobiDBLite
mobidb-lite
303 323 21 - –
MobiDBLite
mobidb-lite
381 426 46 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0221200.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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