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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0231900 |
| Transcript ID | LotjaGi2g1v0231900.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphoribosyl-AMP cyclohydrolase; TAIR: AT1G31860.1 histidine biosynthesis bifunctional protein (HISIE); Swiss-Prot: sp|O82768|HIS2_ARATH Histidine biosynthesis bifunctional protein hisIE, chloroplastic; TrEMBL-Plants: tr|A0A072U2X9|A0A072U2X9_MEDTR Histidine biosynthesis hisIE protein; Found in the gene: LotjaGi2g1v0231900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:69101153..69109448) extracted from Lotus japonicus Gifu genome v1.2.
GGGGTGCCAAACCCAAATCCCCATAACCATCCAAGGTTGTGTGTCTCATTCTCCCTGTTGCGCTTTTGGATGTTGGGGCT CTTCAGATCGGCTCTACTCCACTGAAATTCATCCGCCGCGCCGTCAGGAGGTCGTCCGCCGCCGCCGCCGGTTTCAGCAG CCAGCCCTCCTCCACCTCCCACCGGTATGATTTTGGTCTTCTCTTGCCCCTGTTTGGTATTTTGTTTCTTTGGCCTTTGC TTCTCTGCTTAGTAAACTGTGGTCTGTTTACATTGTCTAGGCATAAAGGATTCTCATAGGTAAATGCAAATGAAACCACA AATGGTGCATTCTTATAGTTAACTGGGACTGGGTAGTATTTTCCTCTACCTATAGCACATTCAGAAATGGGTTATCTATG AATTAAATTTAAGCTTGTAAAACAAGTGAATATATATACACACTAGGGTTAGGGTACCCATACCTGGAAAACATGTGAAT ATATATAATAGGTTGTAAAATATTTCGATGTTACAGTTTTTGTTTTTTCTGCCTAAGATTGGTTACAGTTTAGACAGCAT TTTGATTTAATATTGTATATAACAGTTTCTGTAGGAGAGGAAGGACTCTGCAATTGAAAGAAATTTATGGTCTTTTGACA TGTTTCCCCTGAATTTTAAATTGAATTCATGGTTTTATTGCCTTCACTTTGCTCATAGTTATTCTTATTATGTCCCTTAG ATCAAAGTGCTTTCTGCATCAAAATCTTTAGAGTTTAGACTAGACATTTTTCTGCATTTATTCCTAATATTTAAATTTTA AAAAATTATTTGTATCTTAAAGGTAGACAGACTGCATAGGTTAATTTTTTTAATTTAAGGGTTTTTTTTTGTCTTTGGCC CATGTGTGTTAGGGTTAACTGGGTTGAGGGTTCGCCCTTATTGGAGGTTCTATGAATTGGTTCCTAATAAAACATTGTTT GTTTCCTTACAATTGCACAGGCAAGTGGTTGTCAGAGGTGGTGTTTCAATTCAATGGCTGTTTCCTACGTTCACATGCTT CAATCTGCCAGAGGTTTCCACAAATGCAACCTCTCATTTTCCAGTCATGAGTATCCTAGACGCAGTTACAAGACCCACCA CTTAGTTTTCGCTTCTATGCACACATCAAACCCCAAGGTACTTGAATGTGAACTAACTATTGTATTTCCTATATTCTGTG TATGAATGGTCTTTGAGCCCTTTGGTTTGCTTAGATGCACTGTAATCTGGGTTGTGTGGAGAGTTTTGCACTGCTCTATG CTGGTTCTACTGTGTTTTCTTGCTGATGCTAGCTGCCCTCTATTTCCCCTCTGTTGCCTAGTGGTTTACAGGAAGCCAGG CTTGTGTTTTGGTTTATTGGTAGCTGATTGCAATGGGTTTTGCTGCTGCGTGTTGGTGTTGAGCTTACAATCATGGTTGC TGGTCTGGAATGCTATGATTACTCTTTCTAGTTGCTGAAATTGTGACTCTTTCTATCTAGTTTTTCTCTAGTCTTTTAGT TCTTTTATGTTTGCTTATTTTTTTCTTTCCTTGTATTAAGGGTTGGGGCACCCTTCGTGCTCCCTTAATGCAATTATTTG GCTGATAAAAAAAAAAACTATTGTGTTTTCTATGATTTGATTGCTTTGCTTAGCATGTTGTTTGGGAAATTGGCAATGGG AGTTCTTGAGAAAATAGGGGGAAAAGTGGGTTGCCTTTGTTTTATTTTATTTTTCATTATCAGATGGTATGTTTTTAATG GGCATTACAAAATACTAGCTTGTTTCAATTTTGTTTACTGATCTACAATTTACATAAGGCTCTGTTTGGGAGTTTATCAA GATTTTGTATTGGCCAGTTAATGGTGCATTCTTCTTATTAGGGTGGATCTTCGTCTGGATGTTAAAAGATGGTTCTCATG ATGATTTTTGTGATTGCGTCCTTGAAATAGGTAGTACGGTGAATGCATTGTTTTTTTGTTTTAGAATCGGAAGCCAGATT CATGCATAGATTTGTCTTTGTATGAAACTACCGCTCACCTGGTTATTTATGTTACTGAGAGATCATTGTCATTCCGCTCA CTTGGTTATTCATGTCACTGAGAGATCGTTGTCATTATATAAATAAGGCGTTAGAGACCACAAAGCATGCTATCTAAAAG GAATTACCACTTTGTTCACTATCTGTTACAGATGGTCATTGTTTAGGATTTCATATTATTCATGATGTAGTGGTAGTGGA CATGCAATTTGATTATGCATTATGTTTAATTGACAATTAGATTGTGTACAAGTATCTCGGTCAATCATCTACTCTGCTTT TGATTTTATAAAATAATTGGTTACATTAGCATCTATCAAAGTAGTTATGCTTATTCCACTTGAATTTGATAAAATAATAC TTGTATTTCATTGATTAATACTTGACTGAAAACTACAATATATATAGACTAACAAAGAGATAAAAAGAAACTAAATATAT CTAAACCTATCTCTATTTAAATAGATATCATCTCTATTTAAATAGATACTAATCTAAGATATACTAATCTAAGATAGAGA AACAAATCTAAACTATATCTCAATGAGACAAGACTAATTATAAACTAAATCTTAATAGATATTCAACACTCCCCCTCAAG CTAAAGCTTACTTAGCTTTAAGCTTGTAACAAATCGAACCCAAGAAGAACATTATCTTAATAGATATCCCTTAATAATGA CGATCTTGGTGAATCTCTGAATTGAATAACCTTTCAAACTTCGAGTAAATCCATGGCAGCAAAAGACAACTTCTAATACT TCAAATTGAATAATCTTTTGAACTTCTGCTAAATTCATGGGCAGGCAAAAGACAACTTCTCATACTTGATCTGGCTGAAA TTGATGCAAGACAAAAACCAATTCTTCTGGAGTGTCGTAGGGTAGCTGAGCCAGCAAACAAGGGCGAAAAAAACCAGCAA CAATACGCCCGAAAACAAAACAAGGCTGAAGCAACAACTCACCAACAACAACCACACAGAAATAAAACATACTTGAGGTC GACCGATTGATGGCTTCTAAGACAAACAATGGTGTCAACTTTGACACAGACAACTCTCAAACATTAGAGAGTGGGCCAGC GCCACTCGCAGCTGAAGCCCTAAACCAGAACCAATAACTCTCAACTAGAGAGTGGGCCAGCGCAACTCGCAGCTGAAGCC CTAAACCAGAAAACCAAACAACTAGAAAACCAAACAATCGAGACGAAACAAACGAAGGTGACAATGTCACCTTCAAAACC AAATTGCATAAAGTCAGCTAAGAGCAGTATAATAAGAGCATCTCGAACAATGAGACGCAAACAACAACTCAAGTCTCAAA ATCCAATGCGGAACCTGAGCGTGAAAACAGAGTTAAAACTCTAAACCAAACCAAACCAAACCAAACTAAACCAAACCAAA CCAAACCAAACTTGGCCAACAATGAGAGATGGCACGAGAAACGTTCAAACAGGGTCAAAACAGCAAACCCACAAACCAAA CAGGGAGAGGACGACCGGATGATCACAACTGTGACGACACAACACACGTCAAAACAGAGGATCCTTAAAACCAAACCTAG CTGATACACAAAGAGGACCAGCTATAACAAAGCAGCGGAGAGAGCGGCGCGTGGACTTCACACGCAGAGAGATGGGAGGC ACGTGAGGGTGCGTGGCTTGAAATCCGACGGTGGTGGCTGACCATAGTCTCTAATAACACTTCCCCTCAAGCTAGAGCAT ATATGTCATATGCATAGCTTGTAACAAATATTATTAACTCAAGAAGCCACTGCTGTCGGAGAGAGAAATTCACACAACAC TTCCCCTCAAGCTAGAGCATATATATCATATGCATAGCTTGTAACAAATATAATTAACTCGAGAAGAGAAGCTACTGCCA CACAATGCAATGCGGTAATCAGAAATCGTAGAGACTTGAAATTTCCCTTCACCGCCTACTCCCAACGATTAGGTAAAGAC TTTTCCCTTTCAAACAATAGCAGCTTCAATATTGGACTCTAAGAAAGAGTTGCAGTGCACATCAGATGCATACATCCATT CAACAGAAGAAATATTACCAGAGTAACCCAACTCACTAATTGAGAACTTGGCTGGACCAAAGAGCCACCTTGTATCTCTC TAGTTTCTTCATACATGGTAGTTGTAACAGCAACATCAACTACTTCAGGATGCAAAATTAACACAACTTCTAAATCAGCA GGAGCAATCTGAAAGCCCTTGTATTTGATAATACCTTGCAAGCGATCAGATAGCGATCAGATGTATGTATATACTCATCC TGATTGAAATAAACATCTCCAATAACCATCTTTATCTATTGTTGAAATTGTGGCTTCCTCATTATTCACGTATCTTGTAT GAAATCAAGATTAGGAAAGTTTGGACAAAGTAATAAATATCCGCTGCATTCAAAGGTGCTGCACCACTGGAGACCTTAAT CAAACTCTGCCGCTTGCTTCCATTAAAATAATACCAGCCATTGACCATACAAAGACCACATTACTGAATCAGTACAATCT CGAATTATTGACCACGCCATACAAAGAATTCGTATTCCATTCCTTGCGCCGCAACAGATAAGTATGAACGGGGTACCGTG GGAGAGACATAGATATTCCTACCACAGATTCTTAGTGTTCACTAATCAATGAGACTCGCCCACTCAAGGACCAACCTTGC TCAAGATACAGGCGGCGACGCTTCAGGGAAAAGATGGAGGTGTTTCTGATCCGTTTTGAGCAACTTCGGAAAACGGCGGT GGAAAGACGTTGACAGTGTTGAACGCCAATAGTGACTGCCAAGAACGTGACAAGAATCACTAGGGTTTCAAGAGAAAGGG AACCATGATCAGAAAGAAACGAGGCCGTAAGAAAACGGCTAGAACTAACAAGCGCAGAAGCAAAGTATGAAAAATAAATC CAAAGAGATTTGGAAAGTCACCATGAGGGGGCTCACGGGGATTTGGAAAGTCACCATGAGGGGGCTCACGGGGGAGGAGC CCCCTCACAGCGGTAGGATCGAAACTTGCTCTGATACCAACTTGAATTTGATAAAATAATACTTGTATTTCATTGATTAA TACTTGACTGAAAACTACAATATATATAGACTAACAAAGAGATAAAAAGAAACTAAATATATCTAAACCTATCTCTATTT AAATAGATATCATCTCTATTTAAATAGATACTAATCTAAGATATACTAATCTAAGATAGAGAAACAAATCTAAACTATAT CTCAATGAGACAAGACTAATTATAAACTAAATCTTAATAGATATTCAACAATTCCTAAATGGAGGTGGTCACATGATCGA GAATCAACTTGAAATTTCTGCTCCTTCATCACGAGGCTTAAAAACTGAGGTAGACCAGAACTTACTGAAAGTTCTTTCTG GTCTTTGAACAAATCATTTTTCTTTAGCTACAATATTAATGCCTGCTTTGCTATCTTCAAACCTTGGGTGTTGTTTTAGT TGTTTGATTTTCTATCCTAAAGTTGCACTTTACATTAAATTGCGAAGCTGGTCATGTAAGTAATATTTATATTTTTGGGT TGAAATTGGGGCACCTCATGTAAGTTTTATTTATATTTCTGGGTTGAAATTACGTAATAATTTAGTTCCATGGGATTAAG TTCGGAAATTCTTTTGCACTTTTATGGTGATTGTAAATGTGTTGTTGATACTAAAAGGAAAGCTCATCCTTTGTGTTGCT TATGAAATTTCTTGGCAATTGTTGTTTTCATTTCTTCCTTATTTTAATGTTATTTCTGATTTTTTATTTCACTTTAAAAA GTTCAAACTTTTGTCAGGTAGACTCATTTCTGGACAGTTTAAAATGGGATGATAAAGGTTTGGCTGTGGCAATAGCTCAG AATGTTGACACAGGAGCCATCCTAATGCAAGGCTTTGCAAATAGAGAAGCAGTGGTTACAACCATATCTTCTCGCAAGGC CACATTCTATAGCCGGTCACGATCAGCATTGTGGACGAAAGGAGAGACCTCTAATAATTTTATCAATGTTCATGATGTCT TTCTTGATTGTGATCGCGATTCCGTAAGCTCTTGCCTTCTCTCCCGATGGAATTATAAGTGTTTTCCTTTTCTTCTTTGC ATTAGTATCATATGGAACCTTGATTACTTTTTCCCCCTGGTTTCTCAGATAATATACCTTGGAAAACCTGATGGGCCTAC CTGCCACACAGGAGCAGAAACATGCTACTATACATCAGTCTTTGACTTGTTAAAAGAACAAGTGGTTAGTTTAAATTGAT TCAAACAAGCATGTTATTGGCTTGTTTTGTTTCAAATACAGTCTGCAATATTCAAATTTATTTGGGTTTTTTTCTACAGG CTGATGGAAATAAATTGGCATTAACTTCTTTGTATGACTTAGAGTCTACAATATCCCAGCGCAAAGCAGAGTTAGCAGAA GTAGAAAATGGAAAGCCTTCTTGGACAAAGCGATTATTGCTTAATGATGAGTTGTTGTGCTCTAAAATCAGGTTGCGTAT ATATTGGCATGTTCTTCTGTTCAGTTTGAATATAAGTAACAAACCTTTTCCCCCTTTTCTTCCCCCGAAAAATCCATGTT GTCCATGCTTCAGTTATTGCTAAGCCTTTTAGCTGATACAATTGCCTCTGTGCTGAACCTTTTGTTTAAAATACTAATTT TCTTATGATTCACTTTGCTTGAAGAAAACATTTGGAGTAAAAGCTTGTTATCTCTATGACTTCAGATTGTAACTTTATCT TTCTACTTGCAGAGAAGAGGCAAATGAGTTGTGTCAAACACTAGAGAGTAATGAGGACAAGTCGCGTACTGCTTCAGAGA TGGCTGATGTACTGTACCATGCCATGGTTTTGATGGCACGGAAAGATGTCAAAATGGAAGATGTTTTGCAGGTTCTTCGG CAAAGATTTTCCCAATCTGGTATTGAGGAAAAGAGAAGTCGTGCGTCCCAGAAATCAGTGGACGGGTGAGTGTTTTCCCA ATATATATAGCTTGTGTTCTTACCTATGTAACTCTGGTTGAGTTAGGGTAACTTTTGTTCAATAGAGTTCAGTTGAGAAT GTCAAGAACACCATGTAAGATGTAACTGTCATTCTTCATTTTCCAGAGTGATGTTTTACTCATTTCCAGAGGTTTTTAGT TAATTGTATTTACAATTTTACATGCAAGGTTGCATGCTTAAATAGCGCAAACTGTGAGACTATGATATGCTTATTAAGTG TATGTTTGTTTTGGCGTTAGAGCCAACGCAAACGTGATTTCACGTATCTCAAGGTATTAACGGAGAAGTTAGAATTTGTC ACGTTAAGTTTAACGTGGATCGGAGAATTAAGATTTTGTACTGTAACTCCGTTACCTATTTTGTTAGTGCTGCCACTTAC ATTGTGATCTCGGCGCACGTTCCTCCTCACGGTTGCCCTTTATTCTCCTTACCACTTTGTATCTTCCCTACCGATGACTC CATTTCCAGTAATAGCTCCGTTGATCCCATTTCGTCTATGCACTCTACACTGCAAGAAGTGGGACTTGCCTTGGAAGCCT TTAGTAGATTACTTGCTGCCCCCATTGCCCACAATCACCGGATTCAATATCTATAAATTTACATGTTCATTAGTTGTTGA TGCAATTGAGTGTTTAATGCAAATATCACATCTTAAAAATATTATGGGTATCACAGAGTACACTATGGATCGAAGAATGA TGAATAATTAATTAAGGATATTTTTGTAAGAAAATAACTAAAGTTGGAGCAGTTTTTTTTAAGAATCACTTAAGAAGGTG TTCTAAAGTTGGAGCAGTTTTAAGCTTGTGCATATAAATGGACCCTAAAATTTAAGTTAATTCTTATGAAAAGGTCAAAA TTATACTGTCAAGTTGGTTTAGGTAGGAGACACTATTCTGCAATTATTTGCCCTGTGTATTGAGCCAATGCATGTCAATC TGCAAAATAGCACAACCATTGTTGCTAAGCATGCCAACTGATGTTTGTATCTGTATTAGGAAGAGGTCACGATAGAAGAG ATTTTGAAGACACAATGCTGGTGACATCGGATGAGGAGAAAGTGGAGAGTAGTGGGTACTTGTGCAGTTTGCATTTCGTG GCACACACCAAGAGATTCTCGATCTCCGAAAGCAAACACTTGTACTGTTAAAATTGAACTTAACATGAGCCTCCGATCGA GGTGCTTGTTATATGTCAAAGAATAATGGAGCTGGAACTAGTTTGGTGAAGAGGCC
CDS sequence (LotjaGi2g1v0231900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGTTTCCTACGTTCACATGCTTCAATCTGCCAGAGGTTTCCACAAATGCAACCTCTCATTTTCCAGTCATGAGTA TCCTAGACGCAGTTACAAGACCCACCACTTAGTTTTCGCTTCTATGCACACATCAAACCCCAAGGTAGACTCATTTCTGG ACAGTTTAAAATGGGATGATAAAGGTTTGGCTGTGGCAATAGCTCAGAATGTTGACACAGGAGCCATCCTAATGCAAGGC TTTGCAAATAGAGAAGCAGTGGTTACAACCATATCTTCTCGCAAGGCCACATTCTATAGCCGGTCACGATCAGCATTGTG GACGAAAGGAGAGACCTCTAATAATTTTATCAATGTTCATGATGTCTTTCTTGATTGTGATCGCGATTCCATAATATACC TTGGAAAACCTGATGGGCCTACCTGCCACACAGGAGCAGAAACATGCTACTATACATCAGTCTTTGACTTGTTAAAAGAA CAAGTGGCTGATGGAAATAAATTGGCATTAACTTCTTTGTATGACTTAGAGTCTACAATATCCCAGCGCAAAGCAGAGTT AGCAGAAGTAGAAAATGGAAAGCCTTCTTGGACAAAGCGATTATTGCTTAATGATGAGTTGTTGTGCTCTAAAATCAGAG AAGAGGCAAATGAGTTGTGTCAAACACTAGAGAGTAATGAGGACAAGTCGCGTACTGCTTCAGAGATGGCTGATGTACTG TACCATGCCATGGTTTTGATGGCACGGAAAGATGTCAAAATGGAAGATGTTTTGCAGGTTCTTCGGCAAAGATTTTCCCA ATCTGGTATTGAGGAAAAGAGAAGTCGTGCGTCCCAGAAATCAGTGGACGGGTGA
Protein sequence (LotjaGi2g1v0231900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVSYVHMLQSARGFHKCNLSFSSHEYPRRSYKTHHLVFASMHTSNPKVDSFLDSLKWDDKGLAVAIAQNVDTGAILMQG FANREAVVTTISSRKATFYSRSRSALWTKGETSNNFINVHDVFLDCDRDSIIYLGKPDGPTCHTGAETCYYTSVFDLLKE QVADGNKLALTSLYDLESTISQRKAELAEVENGKPSWTKRLLLNDELLCSKIREEANELCQTLESNEDKSRTASEMADVL YHAMVLMARKDVKMEDVLQVLRQRFSQSGIEEKRSRASQKSVDG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 35 | 278 | 244 | 9.5E-107 | – | |
| PANTHER | 35 | 278 | 244 | 9.5E-107 | – | |
| Gene3D | 45 | 142 | 98 | 2.3E-30 | ||
| SUPERFAMILY | 53 | 155 | 103 | 1.31E-37 | ||
| Hamap | 54 | 266 | 213 | 30.06 | ||
| Pfam | 78 | 151 | 74 | 3.6E-27 | ||
| Gene3D | 165 | 261 | 97 | 5.2E-23 | – | |
| CDD | 173 | 261 | 89 | 9.75462E-27 | ||
| TIGRFAM | 173 | 261 | 89 | 1.1E-20 | ||
| SUPERFAMILY | 173 | 265 | 93 | 6.17E-15 | – | |
| Pfam | 175 | 264 | 90 | 7.3E-11 | ||
| Coils | 209 | 229 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Histidine biosynthetic process | The chemical reactions and pathways resulting in the formation of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid. | ||
| Molecular function | Phosphoribosyl-AMP cyclohydrolase activity | Catalysis of the reaction: 1-(5-phosphonatoribosyl)-5'-AMP + H(2)O = 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide. | ||
| Molecular function | Phosphoribosyl-ATP diphosphatase activity | Catalysis of the reaction: 1-(5-phospho-D-ribosyl)-ATP + H(2)O = 1-(5-phosphonatoribosyl)-5'-AMP + diphosphate + H(+). |
Expression pattern of LotjaGi2g1v0231900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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